Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe17g00110 | ATGGGTTGTATCCACACAAAATGTTGCTGTCGGTACCCAAAATCATTGGTTGGAGAATCCCAGGACTTCCACCAAGGGGTTCCTTACTGTCTACAAGATAACAACACTGTGATAGAAAGAGCATTGGAGCTTATTCCTGTGGCTTCCCACAACTATCATTTGGATTACTTGGTATTGGCTCAGCGTGGTTACTACCCTGAATCTCCTGATAAAGAAAATCAAGACAGTTTCTGTATTAGAACAAATGTTCAAGGTAACCCAAATGCTCATTTTTTTGGTGTTTTTGATGGGCATGGTCAATTTGGAATGCAGTGTTCAAATTTTGTGAAGGATAGGTTAATAGAAAAGCTATGGAATGATCCCACATTGTTAGATGATCCTGTTCAAGCTTATAATTCAGCGTTTTTATCCACTAATGATGAATTGCATTCAAGTGAAATAGATGATTCTATGAGTGGAACAACAGCAATTACAGTCCTTGTTGTTGGGGATACTCTTTATGTAGCCAATGTGGGTGATTCAAGAGCTGTAATTGCTGTTAAAGAAGGGAATTGTGTTCTTGCCAAAGATTTGTCAAATGATCAAACACCATTTAGAAAGGATGAATATGAGAGGGTTAAGCTTTGTGGAGCTAGAGTTCTTAGTGTTGATCAAGTGGAAGGACTTGTGGATCCTGATATTCAATGCTGGGGTGATGAAGAAAGTCAGGGCGGCGATCCGCCTCGACTTTGGGTTCAAAATGGGCTGTATCCTGGGACTGCATTTACCAGGAGCATAGGTGATAGTACCGCCGAGCAGATCGGTGTAAATGCTGTTCCTGAGGTTTTAGTTCTTCAGCTCAACCCCAATCATCTTTTCTTTGTGGTTGCTAGTGATGGAGTTTTCGAGTTCCTTTCAAGCCAAACTGTTGTTGATATGGCATCAAGTTATGCAGATCCTCAAGATGCATGTACCGCCATAGCTGCCGAGTCGTATAAACTATGGATGGAACATGAAAATCGTACCGATGATATAACCATCATTATTATTCATATCAAAGGCTTGTCTAATGTATGA | 1056 | 40.53 | MGCIHTKCCCRYPKSLVGESQDFHQGVPYCLQDNNTVIERALELIPVASHNYHLDYLVLAQRGYYPESPDKENQDSFCIRTNVQGNPNAHFFGVFDGHGQFGMQCSNFVKDRLIEKLWNDPTLLDDPVQAYNSAFLSTNDELHSSEIDDSMSGTTAITVLVVGDTLYVANVGDSRAVIAVKEGNCVLAKDLSNDQTPFRKDEYERVKLCGARVLSVDQVEGLVDPDIQCWGDEESQGGDPPRLWVQNGLYPGTAFTRSIGDSTAEQIGVNAVPEVLVLQLNPNHLFFVVASDGVFEFLSSQTVVDMASSYADPQDACTAIAAESYKLWMEHENRTDDITIIIIHIKGLSNV | 351 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 676117 | 679856 | - | Cp4.1LG17g01050.1 | Cpe17g00110 | 483428 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe17g00110 | 351 | Pfam | Protein phosphatase 2C | 74 | 324 | IPR001932 | - | |
Cpe17g00110 | 351 | Coils | Coil | 349 | 351 | - | - | |
Cpe17g00110 | 351 | SMART | PP2C_4 | 47 | 343 | IPR001932 | - | |
Cpe17g00110 | 351 | CDD | PP2Cc | 71 | 328 | IPR001932 | - | |
Cpe17g00110 | 351 | ProSitePatterns | PPM-type phosphatase domain signature. | 91 | 99 | IPR000222 | GO:0043169 | |
Cpe17g00110 | 351 | ProSiteProfiles | PPM-type phosphatase domain profile. | 55 | 345 | IPR001932 | - | |
Cpe17g00110 | 351 | Gene3D | - | 50 | 347 | IPR036457 | - | |
Cpe17g00110 | 351 | PANTHER | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE | 40 | 350 | - | - | |
Cpe17g00110 | 351 | PANTHER | PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN | 40 | 350 | - | - | |
Cpe17g00110 | 351 | SUPERFAMILY | PP2C-like | 48 | 347 | IPR036457 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g01405 | Cpe17g00110 | CCT | |
Cpe12g00239 | Cpe17g00110 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe17g00110 | Cpe-Chr17:676117 | Cpe18g00410 | Cpe-Chr18:5284713 | 1.15E-142 | dispersed | |
Cpe12g00239 | Cpe-Chr12:1606039 | Cpe17g00110 | Cpe-Chr17:676117 | 0 | wgd | |
Cpe17g00110 | Cpe-Chr17:676117 | Cpe03g01405 | Cpe-Chr3:11329796 | 7.99E-180 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe17g00110 | - | - | cmax:111494336 | 711.064 |