Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00119 ATGCAGCACGATCAGAGAAGAAAGTCGTCTATAGATGTGGATTTCTTCACAGAATATGGTGAAGGGAGCAGGTATAAAATAGAGGAAGTAATTGGTAAAGGAAGTTATGGTGTTGTTTGCTCTGCATATGATACTCATACCGGTGATAAAGTTGCAATTAAGAAAATCAACGATATCTTTGAGCATGTCTCTGATGCAACTCGCATTCTTCGTGAGATAAAACTTTTAAGACTATTGAGACATCCAGACATTGTAGAGATAAAGCACATCCTACTACCTCCATCTAGACGGGAATTCAGGGATATATATGTTGTGTTTGAGCTCATGGAATCTGATTTACACCAAGTTATCAAAGCAAACGACGATTTGACTCCAGAACATTATCAGTTCTTTCTTTACCAGCTTCTTCGTGGCTTGAAATATATACACACAGCAAACGTCTTCCACAGGGACCTAAAACCCAAAAACATCTTAGCAAATGCTGACTGCAAACTCAAGATCTGTGACTTTGGTCTAGCCAGAGTTGCTTTTAATGATACTCCTACTGCTATTTTCTGGACTGACTATGTAGCAACAAGGTGGTACAGGGCTCCTGAACTGTGTGGTTCATTTTTCTCAAAGTATACCCCAGCAATAGATATATGGAGCATTGGTTGCATCTTTGCAGAGCTTTTAACTGGAAAACCACTTTTCCCTGGAAAGAATGTCGTGCACCAATTAGATTTGATGACAGATTTTCTGGGAACCCCTAATGCAGAAGCCATTGCCAGGATACGAAATGAGAAAGCTCGGAGATACTTAAGCAGTATGCGAAAGAAGAAGCCTGTTCCTTTCTCCCAGAAGTTTCCTCATGCAGATCCCCGAGCACTTCCCTTATTGGAAAGAATGTTGGCTTTTGAGCCAAAGGATCGACCTACAGCAGAGGAGGCCCTTGCAGATCCATATTTTAAAGGCTTAGCGAAGGTTGAAAGAGAGCCATCTGCTCAACCTGTCACTAAGATGGAATTTGAATTTGAGAGACGAAGAATTACCAAAGAAGATGTTAGGGAGCTTATTTACCGGGAAATTCTCGAGTACCATCCAAAGATGTTGAAGGAGTTCTTAGATGGATCAGAACCTACCAGTTTCATGTATCCAAGTGCAGTTGACCATTTTAAGAAGCAATTTGCATACCTTGAAGAACACTATGGAAATGGTGCAACCGTTGCCCCTCCTGAAAGACAACATGCATCCTTGCCTAGGCAATGTGTTTTATATTCAGATAACATGGTACACAACTCGGCACAAGTTGTGAATGACCTATCCAAATGTTCCATCAAAGAAGTTGAGAGGCCACAAGTGGATAGGACTTGCAATATTCCTTCAGCTAGAGCTCCTATTCAAGTTCCTCAATCTATTCAAGGCAATGCTGCAAGGCCTGGAAAAGTTGTTGGCTCTGTGTTGCGATACAACTGCGGGGCTACAGCAGCAGCAGTGGTACCAGAAGTTCTTGAACAGCGGAGGACGACCAGAAACCCTTCCATTCCACCACAGTACGCCCCTAATAACTGTTCATATCCTAGAAGAAACTCATCATGTAAAAACGATACGACTGAAGATGAAGCCATTGAAGGTTCGAATGGATTGCAGCCAAAACCTCAGTACATAGCTAGAAAAGTTGCTGCTGCCCAAGGCGGACCAGGAAATAACTGGTACTGA 1698 42.29 MQHDQRRKSSIDVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTHTGDKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPNAEAIARIRNEKARRYLSSMRKKKPVPFSQKFPHADPRALPLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLDGSEPTSFMYPSAVDHFKKQFAYLEEHYGNGATVAPPERQHASLPRQCVLYSDNMVHNSAQVVNDLSKCSIKEVERPQVDRTCNIPSARAPIQVPQSIQGNAARPGKVVGSVLRYNCGATAAAVVPEVLEQRRTTRNPSIPPQYAPNNCSYPRRNSSCKNDTTEDEAIEGSNGLQPKPQYIARKVAAAQGGPGNNWY 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 737050 743657 - Cp4.1LG17g01270.1 Cpe17g00119 483437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00119 565 MobiDBLite consensus disorder prediction 500 544 - -
Cpe17g00119 565 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe17g00119 565 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cpe17g00119 565 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe17g00119 565 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Cpe17g00119 565 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Cpe17g00119 565 MobiDBLite consensus disorder prediction 500 525 - -
Cpe17g00119 565 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Cpe17g00119 565 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 470 - -
Cpe17g00119 565 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Cpe17g00119 565 CDD STKc_TDY_MAPK 24 361 - -
Cpe17g00119 565 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe17g00119 565 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 9 470 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g00231 Cpe17g00119 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01376 Cpe-Chr4:11169248 Cpe17g00119 Cpe-Chr17:737050 0 dispersed
Cpe09g01119 Cpe-Chr9:9629950 Cpe17g00119 Cpe-Chr17:737050 0 dispersed
Cpe15g00873 Cpe-Chr15:8465383 Cpe17g00119 Cpe-Chr17:737050 0 dispersed
Cpe16g00730 Cpe-Chr16:7402300 Cpe17g00119 Cpe-Chr17:737050 0 dispersed
Cpe17g00119 Cpe-Chr17:737050 Cpe18g00681 Cpe-Chr18:6822933 0 dispersed
Cpe20g00144 Cpe-Chr20:812233 Cpe17g00119 Cpe-Chr17:737050 0 dispersed
Cpe12g00231 Cpe-Chr12:1545585 Cpe17g00119 Cpe-Chr17:737050 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62928 PF00069 Pkinase 1.00E-67 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00119 - K04371 csv:101216364 1090.87