Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00126 ATGTTTATAAGAATTTGCCGTGCATTTTTTGAAGGGGAAGGAAAAGAAAGAACATATAGGAGTTGGTTTTGGTTTTCAACTATGGAAATGGATCAAGCTGATTTGAGTGTTCGATTATCTGCGCTTTGGAATATCATTGGTGCAAGAAGAAGCCTAAAAGACGACGGAATTCCTTGCCAAATTGAAGAGGGTGTGTTCTTAGGTTCTATTGGAGCTGCCCATAACAAGGATGAACTGAAGAAATTGAATATCACTCACATTTTAACCATTGCTTGTTCCATGCCACCTGCTAATCCAAATGATTTTGTATATAAAGTAGTTGGAGTCGTGGACACTAGAGACGCCGATATTAAACAGCACTTCGATGATTGTTTCAACTTTATTGAAGAAGGAAGACAATCTGGAGGGGTCTTGATTCATTGCTTTGCTGGAGTATCCAGAAGTGTAACCATTACACTTGCCTATCTGATGAAAAAACGTGGTATGAATCTAACTGAAGCATTGGAACATGTCAAGAGCAGACGACCACAGGCTTCTCCGAACGTCGGTTTCATGTTTCAACTCAAGGACTTCGAAACAACCCTTCAAGCTAGCAAAGAGGATGGGATGAAATTGTCAAATGTTTGA 627 39.71 MFIRICRAFFEGEGKERTYRSWFWFSTMEMDQADLSVRLSALWNIIGARRSLKDDGIPCQIEEGVFLGSIGAAHNKDELKKLNITHILTIACSMPPANPNDFVYKVVGVVDTRDADIKQHFDDCFNFIEEGRQSGGVLIHCFAGVSRSVTITLAYLMKKRGMNLTEALEHVKSRRPQASPNVGFMFQLKDFETTLQASKEDGMKLSNV 208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 803684 807991 - Cp4.1LG17g01240.1 Cpe17g00126 483444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00126 208 ProSiteProfiles Dual specificity protein phosphatase domain profile. 57 197 IPR020422 GO:0006470|GO:0008138
Cpe17g00126 208 Pfam Dual specificity phosphatase, catalytic domain 65 193 IPR000340 GO:0008138|GO:0016311
Cpe17g00126 208 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 1B 46 199 - -
Cpe17g00126 208 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 54 197 IPR029021 -
Cpe17g00126 208 CDD DSP 58 190 - -
Cpe17g00126 208 SMART dsp_5 57 194 IPR020422 GO:0006470|GO:0008138
Cpe17g00126 208 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 46 199 - -
Cpe17g00126 208 Gene3D Protein tyrosine phosphatase superfamily 51 205 IPR029021 -
Cpe17g00126 208 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 119 176 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00928 Cpe-Chr14:7805755 Cpe17g00126 Cpe-Chr17:803684 1.94E-07 dispersed
Cpe15g00859 Cpe-Chr15:8375603 Cpe17g00126 Cpe-Chr17:803684 2.48E-13 dispersed
Cpe17g00126 Cpe-Chr17:803684 Cpe18g00937 Cpe-Chr18:8248876 3.89E-19 dispersed
Cpe17g00126 Cpe-Chr17:803684 Cpe01g01110 Cpe-Chr1:6560631 1.70E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00126 - - bhj:120092603 319.316