Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe17g00198 | ATGGAAGCTACTAGATGTTGGTTTAAGAAGTTCAAATCCAAAGACAATCCAAAGCCCCCTACAAATAAGGAGAGTACAGGCAATGCAAGAGATGCATCGAGACCACCAACCAGTGAAGAGGTACCCTCCAATGTCACCAAGCAGAAGGTTGCAGCTGCCAAACAGTATATAGAAAACCACTACAAGAAGCAAATGAAGAGCTTGGAAGAAAGGAGGGAGAGACGCCATGTACTAGAAAAGAAGTTGGCTGATGCTGAGGTCTCTCAAGAAGAGCAAAGCAACCTGCTTAAGCATCTAGAGAAGAAGGAAACAGAGTATATGCGTCTTCAGAGGCATAAAATGGGTGCTGATGATTTTGAGCCACTAACAATGATAGGGAGGGGTGCTTTTGGAGAGGTTAGAGTTTGTCGGGAGAAAGCAACTGGCCATGTATATGCCATGAAGAAGCTTAAGAAATCAGAGATGCTTCGAAGAGGCCAGGTTGAGCATGTGAAAGCTGAAAGGAATCTATTGGCGGAGGTTGACAGTAATTGTATTGTAAAGTTGTACTGCTCTTTCCAAGATGAAGAGTATTTATATCTTATTATGGAATACTTACCTGGTGGGGATATGATGACTTTGTTGATGAGGAAAGATACTCTTACAGAAGATGAGGCTCGATTTTATGTTGGTGAAACAGTTTTAGCTATCGAGTCAATCCATAAACATAATTATATCCACAGAGATATCAAGCCTGATAACTTGCTTCTTGACAAGGATGGCCATATGAAATTATCAGATTTTGGATTATGTAAACCATTAGATTGTAGTAACCTCCAAGAAAAGGATTTTTCCCAGGGAAGTAACCTTAGTGGTGCTCTTCAAGGTGATGGGCGTCCTGTGGCATCAAAACGCACACAGCAGGAACAACTACAGCATTGGCAAAGGAACAGGCGGATGCTTGCTTATTCTACAGTTGGAACGCCTGATTATATTGCTCCGGAAGTTCTGCTGAAGAAAGGATATGGAATGGAATGCGATTGGTGGTCACTTGGTGCCATCATGTATGAAATGCTTGTGGGTTTTCCACCGTTTTACTCAGATGAGCCTATGTCAACTTGTAGGAAGATAGTTAATTGGAAAACTCATTTGAAATTTCCAGAAGAAGCGAAACTCTCTCCAGAAGCGAAGGATCTAATTAGTAAACTCTTATGCAATGTTGAACAAAGGCTTGGGACCAAGGGTGCAGATGAAATAAAGGCACACCCATGGTTCAAGGGCATTGAATGGGACAAGTTGTATCAAATGAAAGCTGCATTTATTCCTGAGGTCAATGATGAACTGGATACTCAAAATTTTGAGAAGTTTGAAGAGACTGAAAACTCAATTCAGACGTCATCGAAATCAGGTCCATGGAGAAAGATGCTGTCATCGAAAGATATTAACTTTGTGGGTTATACGTACAAGAACTTCGAAATCATCGATGATAATCAATTGCCTGGAATCGCTGAATTGAAGAAGAAGAGCACAAAATCTAAAAGACCTTCCATCAAATCTCTTTTCGAAAACGAATCTGCAATGGCGACCAATCAACAACCTGTTCAAGGCAGCTTTTTGAAACTCTTGCCTCCCCAACTAGAAGTTCCTGAGAAACCGATGAGCGCCAATGGGAAGCATTCATGA | 1662 | 41.34 | MEATRCWFKKFKSKDNPKPPTNKESTGNARDASRPPTSEEVPSNVTKQKVAAAKQYIENHYKKQMKSLEERRERRHVLEKKLADAEVSQEEQSNLLKHLEKKETEYMRLQRHKMGADDFEPLTMIGRGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKDGHMKLSDFGLCKPLDCSNLQEKDFSQGSNLSGALQGDGRPVASKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGFPPFYSDEPMSTCRKIVNWKTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEETENSIQTSSKSGPWRKMLSSKDINFVGYTYKNFEIIDDNQLPGIAELKKKSTKSKRPSIKSLFENESAMATNQQPVQGSFLKLLPPQLEVPEKPMSANGKHS | 553 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 1277546 | 1284447 | + | Cp4.1LG17g01940.1 | Cpe17g00198 | 483516 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe17g00198 | 553 | Pfam | Protein kinase C terminal domain | 437 | 481 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 | |
Cpe17g00198 | 553 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 41 | 520 | - | - | |
Cpe17g00198 | 553 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 238 | 250 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe17g00198 | 553 | Gene3D | Transferase(Phosphotransferase) domain 1 | 205 | 435 | - | - | |
Cpe17g00198 | 553 | ProSitePatterns | Protein kinases ATP-binding region signature. | 125 | 148 | IPR017441 | GO:0005524 | |
Cpe17g00198 | 553 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 41 | 520 | - | - | |
Cpe17g00198 | 553 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Cpe17g00198 | 553 | SMART | serkin_6 | 119 | 418 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe17g00198 | 553 | SUPERFAMILY | Protein kinase-like (PK-like) | 94 | 471 | IPR011009 | - | |
Cpe17g00198 | 553 | ProSiteProfiles | Protein kinase domain profile. | 119 | 418 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe17g00198 | 553 | Coils | Coil | 68 | 102 | - | - | |
Cpe17g00198 | 553 | CDD | STKc_NDR_like | 117 | 482 | - | - | |
Cpe17g00198 | 553 | Gene3D | Phosphorylase Kinase; domain 1 | 108 | 204 | - | - | |
Cpe17g00198 | 553 | MobiDBLite | consensus disorder prediction | 20 | 48 | - | - | |
Cpe17g00198 | 553 | SMART | pkinase_C_6 | 419 | 483 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Cpe17g00198 | 553 | Pfam | Protein kinase domain | 121 | 418 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe17g00198 | 553 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Cpe17g00198 | 553 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 419 | 491 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe12g00136 | Cpe17g00198 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g01042 | Cpe-Chr4:9213627 | Cpe17g00198 | Cpe-Chr17:1277546 | 0 | dispersed | |
Cpe05g00706 | Cpe-Chr5:4326768 | Cpe17g00198 | Cpe-Chr17:1277546 | 1.39E-73 | dispersed | |
Cpe10g00039 | Cpe-Chr10:261697 | Cpe17g00198 | Cpe-Chr17:1277546 | 0 | dispersed | |
Cpe11g00151 | Cpe-Chr11:846568 | Cpe17g00198 | Cpe-Chr17:1277546 | 0 | dispersed | |
Cpe12g01138 | Cpe-Chr12:9355714 | Cpe17g00198 | Cpe-Chr17:1277546 | 6.54E-162 | dispersed | |
Cpe13g00064 | Cpe-Chr13:499080 | Cpe17g00198 | Cpe-Chr17:1277546 | 2.29E-85 | dispersed | |
Cpe17g00198 | Cpe-Chr17:1277546 | Cpe17g00907 | Cpe-Chr17:7020142 | 0 | dispersed | |
Cpe12g00136 | Cpe-Chr12:864627 | Cpe17g00198 | Cpe-Chr17:1277546 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62931 | PF00069 | Pkinase | 7.10E-66 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe17g00198 | K08790 | - | csv:101205120 | 1076.23 |