Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00212 ATGGCCGGTGAGGTAGCGGTAGAGGGTGCTGCGGCGGCGACTGAAGTACCCGATTCCAATCAGCAGTCCCACAAATTGGAGAGAAAATGGACCTTTTGGTTTGATAATCAGTCGCGGCCGAAGCAAGGCGCCGCTTGGGGCTCCTCTCTGCGCAAGGTCTATACCTTCGACACCGTCGAGGAATTTTGGTGTTTGTACGATCAGATACCAAAGCCGAGCAAGTTGCCGGCCAATGCAGATTTTCACTTGTTCAAATCTGGAGTTGAGCCGAAATGGGAAGATCCTGAGTGCGCTAATGGAGGAAAATGGACTGTCACGAGCAGTAGAAAGGCTAATCTTGATAGCATGTGGCTGGAAACGTTGATGGCTTTAATTGGGGAACAATTCGAGGAGTCTGATGAGATTTGTGGCGTAGTTGCCAGTGTGCGCCAGAGGCAGGACAAACTTGCATTATGGACAAAGAATGCAACAAATGAGGCTGCTCAGATGAGCCTTGGTAGGAAATGGAAGGAGATCATCGACGTCACCGACAAGATTTCCTTCAGCTTTCATGAGGACTTGAGGAGGGAAAAGTCGGCAAAATCTCGATACAGTGTCTGA 600 49.67 MAGEVAVEGAAAATEVPDSNQQSHKLERKWTFWFDNQSRPKQGAAWGSSLRKVYTFDTVEEFWCLYDQIPKPSKLPANADFHLFKSGVEPKWEDPECANGGKWTVTSSRKANLDSMWLETLMALIGEQFEESDEICGVVASVRQRQDKLALWTKNATNEAAQMSLGRKWKEIIDVTDKISFSFHEDLRREKSAKSRYSV 199
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1370438 1374177 - Cp4.1LG17g02170.1 Cpe17g00212 483530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00212 199 SUPERFAMILY eIF4e-like 18 192 IPR023398 -
Cpe17g00212 199 ProSitePatterns Eukaryotic initiation factor 4E signature. 80 103 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Cpe17g00212 199 PANTHER BNAA08G29940D PROTEIN 11 191 - -
Cpe17g00212 199 MobiDBLite consensus disorder prediction 1 22 - -
Cpe17g00212 199 Pfam Eukaryotic initiation factor 4E 25 181 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cpe17g00212 199 Gene3D RNA Cap, Translation Initiation Factor Eif4e 15 199 IPR023398 -
Cpe17g00212 199 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 11 191 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00780 Cpe-Chr9:7245973 Cpe17g00212 Cpe-Chr17:1370438 4.62E-75 dispersed
Cpe17g00212 Cpe-Chr17:1370438 Cpe20g00489 Cpe-Chr20:2828156 6.91E-75 dispersed
Cpe03g00945 Cpe-Chr3:6972097 Cpe17g00212 Cpe-Chr17:1370438 1.71E-26 transposed
Cpe12g00123 Cpe-Chr12:772693 Cpe17g00212 Cpe-Chr17:1370438 1.14E-128 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00212 K03259 - csv:101208495 376.326