Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00231 ATGGAAGGCGTATTGGGTGAGTCGGCAATGGCGACGGTGGCGAGGAAGGGGAAAGTTTGTGTTACCGGGGCTGGAGGGTTTATTGGTTCGTGGGTCGTCAAGCTTCTGTTGTCGAGGGATTACATTGTCCACGGAACTGTCAGGGAACCCGGTGACGCCAAGTATGATCACTTGAGAAAACTCGAGAAAGGGACCGAGAATTTGAAACTGTTTAAGGCTGATTTACTGGACTATGAATCTATGCATTCTGCGATCGCAGGATGTGATGGAGTTTTCCATGTTGCTAGTCCAGTTCCTCACGCAGCAGTATCAAACCCTGAGACAGAAGTGATCGAACCTGCTGTAAAGGGCACACGTAACGTGCTTGAAGCATGTGTGGATGCAAAAGTTAAGCGAGTTGTTGTAGTATCCTCTGTTGCTGCAGTGTTTTTCAATCCCAGCTGGCCTCAAGGTCGGGTAATAGATGAAAGTTGTTGGTCTGACAAGGAGTACTGCAAAGCTACCAAGAACTGGTATTTTCTGGCAAAAACAGAAGCTGAAAGTGAAGCCTTGGAGTTTGGGAGAAGACGTGGGCTTGACGTTGTGACTATTTGTCCTACCCTCGTTATCGGGCCAATTTTGCAGCCAACAGTCAACGCCAGCAGCATGAACTGGTATTTTCTGGCAAAAACAGAAGCTGAAACCGAAGCCTTGGAGTTTGGGAGAGGACGTGGGCTTGACGTTGTGACTATTTGTCCTTCCCTCGTTTTGGGGCCGATTTTGCAGCCAACAGTCGGCGCCAGCAGCTTGGTTCTTCTCAGAATTCTTAAAGAAGGGTGCGAGACGATGGAAAATAATCCACATATGTTGGTAGATGTACGAGACGTAGCAGAGGCGTTGGTTCTTTTATATGAGAAGGGGGAGGCAGAAGGAAGATACATTTGTACATCGCATACAAAAGAGACAAGGGAGCTGGTGGATGCATTGAAGAAGAAGTACCCTGATTATAGCTACCCAAAGACGTTGAGTGAAGGGAATGGGAAGGCGCTAAGTCTGAGCTCGGAGAAGCTGCAAGGGTTGGGTTGGAAGTGTCGGGCGCTGGAGGAGACGCTTGCCGATGCTGTGGAGAGTTTCAAAGACATCGGGATAAGGAAGCAAAGCCCAGCCCAGTTCCATATATTTGGGCTCCCGCGTCTACTGCTTCCATTGTTTGCTTTCCCGCCTCGCCTGAGCCGACCGATGGCTCGCCGGAGCTTCCTTTCTCTATTACTTCCTCATCGTCGGACGCTTTGTTCGTTGTATATATCCATGGCGGCTAATTTACCGGTCCAAGATCCCCCCACGGATGCTTCTGCCAAACAACCTACGCCTTCGCCTTCCCCCACTCTTGTAACCCCTCCCGTTAAGATCGACACTCCTTCATCCGACTCCGGCAAGACCCCCGCCGCCGTTCCCGCTTCCACCCCTCGCCCCGAGGACCTCCCTCAATCCGCCTCTCCCGATCCAGTTCATCTTCCCAGCTACTCCAGATGGTTCTCCTGGAACGGCATTCACGAGTGCGAGGTTCGGTTCCTTCCGGAGTTCTTCGATTCACGGTCGCCCTCTAAAAACCCTAGGGTTTACAAGTACCTTCGAAATGCCATTGTCAAGAATTTCAGAGAATGCCCTTCCAAGAAGATCACATTTACTGATGTCCGAAAGACGCTCGTTGCCGATGTAGGATCTATTCGAAGGGTTTTCGATTTTCTCGAGGCTTGGGGTCTCGTCAATTACTCGCCGTCCGCCCTGAACAAACCTCTCAAGTGGGAGGACCGGGACTCGAAGTCTAATTCGTCCGCTTCGCACACCGGTGAACCTGGAGGTAGTTCCGCAGATTCCTCAGCTCCTAAAGACGCTTCTAAGAGAGTATGCAGCGGTTGCAAGTCTATTTGTAGCATCGCTTGCTTTGCATGCGATAAGTTTGATTTGACGCTTTGTGCGAGGTGCTATGTTCGTGGAAACTATCGAGTTGGTGTTAGTTCTTCAGATTTTCGACGTGTTGAGATCAATGATGAGACACGAACAGATTGGACTGATAAGGAGACTTTGCATCTTCTTGAAGCTTTGACGCATCATGGTGATGATTGGAAAAAGGTCGCACAACATGTTGGTGGCAGAACTGAAAGGGAATGTGTTGCCCATTTTGTGAAGCTTCCTTTGGGGGAGCAGTTTCTTGGTTATCCAGATTCCGGAAATGTTGGTGGCAGAACTGTAGTGAAGGATCATGCCAGTGCCGATCTTACATTAGAAAGTACACCTCTTACTAGTAAAAGAATCCGTCTATCTCCTCTGGCAGATGCAAGTAATCCCATAATGGCTCAGGCTGCCTTTTTGTCATCTTTGGTGGGTGTTGAAGTAGCAGAAGCAGCTGCCCATGCAGCTGTGGTTAAACTTTCTGATATGGGCTTTGGAGGAGATGGGGAAATTGCCACAGCTGTCGCTAGGAATATAGGAGACCAAGGAAACAACGTTGTATCCTGTGGAGGCAGCACTGCTAGGAGCTCATTTAGTGTGTCTTCGGTGGATGCAAACTCACAGATTGAGAAAGAAGAGGTGGCTGTGGAGAAAGCAATATCTCATATACTAGACGTCCAA 2613 49.33 MEGVLGESAMATVARKGKVCVTGAGGFIGSWVVKLLLSRDYIVHGTVREPGDAKYDHLRKLEKGTENLKLFKADLLDYESMHSAIAGCDGVFHVASPVPHAAVSNPETEVIEPAVKGTRNVLEACVDAKVKRVVVVSSVAAVFFNPSWPQGRVIDESCWSDKEYCKATKNWYFLAKTEAESEALEFGRRRGLDVVTICPTLVIGPILQPTVNASSMNWYFLAKTEAETEALEFGRGRGLDVVTICPSLVLGPILQPTVGASSLVLLRILKEGCETMENNPHMLVDVRDVAEALVLLYEKGEAEGRYICTSHTKETRELVDALKKKYPDYSYPKTLSEGNGKALSLSSEKLQGLGWKCRALEETLADAVESFKDIGIRKQSPAQFHIFGLPRLLLPLFAFPPRLSRPMARRSFLSLLLPHRRTLCSLYISMAANLPVQDPPTDASAKQPTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPASTPRPEDLPQSASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNAIVKNFRECPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSALNKPLKWEDRDSKSNSSASHTGEPGGSSADSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFLGYPDSGNVGGRTVVKDHASADLTLESTPLTSKRIRLSPLADASNPIMAQAAFLSSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNNVVSCGGSTARSSFSVSSVDANSQIEKEEVAVEKAISHILDVQ 871
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1492490 1512198 - Cp4.1LG17g02280.1 Cpe17g00231 483549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00231 871 MobiDBLite consensus disorder prediction 460 475 - -
Cpe17g00231 871 MobiDBLite consensus disorder prediction 605 622 - -
Cpe17g00231 871 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 675 717 IPR017930 -
Cpe17g00231 871 ProSiteProfiles SANT domain profile. 678 729 IPR017884 -
Cpe17g00231 871 ProSiteProfiles SWIRM domain profile. 496 593 IPR007526 GO:0005515
Cpe17g00231 871 MobiDBLite consensus disorder prediction 438 494 - -
Cpe17g00231 871 CDD FR_SDR_e 19 355 - -
Cpe17g00231 871 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 14 216 - -
Cpe17g00231 871 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 216 377 - -
Cpe17g00231 871 SMART sant 679 727 IPR001005 -
Cpe17g00231 871 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 14 216 - -
Cpe17g00231 871 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 216 377 - -
Cpe17g00231 871 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 215 374 IPR036291 -
Cpe17g00231 871 Gene3D - 679 728 - -
Cpe17g00231 871 CDD SANT 683 724 IPR001005 -
Cpe17g00231 871 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 211 IPR036291 -
Cpe17g00231 871 Gene3D - 502 587 IPR036388 -
Cpe17g00231 871 Gene3D - 216 385 - -
Cpe17g00231 871 Gene3D - 9 215 - -
Cpe17g00231 871 MobiDBLite consensus disorder prediction 599 623 - -
Cpe17g00231 871 SUPERFAMILY Homeodomain-like 495 597 IPR009057 -
Cpe17g00231 871 ProSiteProfiles Myb-like domain profile. 675 725 IPR001005 -
Cpe17g00231 871 Pfam NAD dependent epimerase/dehydratase family 19 301 IPR001509 -
Cpe17g00231 871 Pfam Myb-like DNA-binding domain 681 724 IPR001005 -
Cpe17g00231 871 Pfam SWIRM domain 499 584 IPR007526 GO:0005515
Cpe17g00231 871 SUPERFAMILY Homeodomain-like 680 728 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00641 Cpe-Chr9:4842957 Cpe17g00231 Cpe-Chr17:1492490 2.09E-06 dispersed
Cpe15g00532 Cpe-Chr15:6214774 Cpe17g00231 Cpe-Chr17:1492490 3.47E-35 dispersed
Cpe17g00231 Cpe-Chr17:1492490 Cpe03g00914 Cpe-Chr3:5911448 5.51E-79 dispersed
Cpe18g00918 Cpe-Chr18:8162127 Cpe17g00231 Cpe-Chr17:1492490 5.39E-39 dispersed
Cpe17g00231 Cpe-Chr17:1492490 Cpe17g00233 Cpe-Chr17:1513021 0 proximal
Cpe17g00231 Cpe-Chr17:1492490 Cpe17g00232 Cpe-Chr17:1512520 2.25E-21 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00231 K11649 - csv:101219016 711.064