Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00233 ATGGCGACGGTGGCGAGGAAGGGTAAAGTTTGTGTTACAGGGGCGGGAGGGTTTATTGGTTCGTGGGTCGTCAAGCTTCTGCTATCCAGGGATTATATTGTCCACGGAACTGTCAGGGAACCCGGTGACGCCAAGTATGATCACTTGAGAAAACTTGAGAAAGGGACCGAGAATTTGAAACTGTTTAAGGCTGATTTACTGGACTATGAATCTCTGCATTCTGCGATCGCAGGATGTGATGGAGTTTTCCATGTTGCCAGTCCAGTTCCTCACACAACTTCATCAAACCCTGAGACAGAAGTGATCGAACCTGCTGTAAAGGGCACACGTAACGTGCTTGAAGCATGTGTGGATGCAAAAGTTAAGCGAGTTGTTGTAGTATCCTCTGTTGCTGCAGTGTTTTTCAATCCCAGCTGGCCTCAAGGTCGGGTAATAGATGAAAGTTGTTGGTCTGACAAGGAGTACTGCAAAGCTACCAAGAACTGGTATTTTCTGGCAAAAACAGAAGCTGAAAGTGAAGCCTTGGAGTTTGGGAGAAGACGTGGGCTTGACGTTGTGACTATTTGTCCTACCCTCGTTATCGGGCCAATTTTGCAGCCAACAGTCAACGCCAGCAGCATGGTTCTTCTCAGAATTCTTAAAGAAGGACTCGAGACGTTGGAAAACAGGCCACGAATGTTAGTAGACGTACGAGACGTAGCAGAGGCGTTAGTTCTTTTGTATGAGAAGGGGGAGGCAGAAGGAAGGTACATTTGTACATCGCATACAATGGAGACAAGGGAGCTGGTGGATGCATTGAAGAAGAAGTACCCTGATTATAGCTATCCAAAGACGTTGAGTGAAGGGAATGAAAAGGCGGTAAGTCTGAGCTCGGAGAAGCTGCAAGGGTTGGGTTGGAAGTGTCGGGCGCTGGAGGAGACGCTTGCCGATGCTGTGAAGAGCTTCAAAGACGCCGGTATGTTGGAGTGA 969 48.09 MATVARKGKVCVTGAGGFIGSWVVKLLLSRDYIVHGTVREPGDAKYDHLRKLEKGTENLKLFKADLLDYESLHSAIAGCDGVFHVASPVPHTTSSNPETEVIEPAVKGTRNVLEACVDAKVKRVVVVSSVAAVFFNPSWPQGRVIDESCWSDKEYCKATKNWYFLAKTEAESEALEFGRRRGLDVVTICPTLVIGPILQPTVNASSMVLLRILKEGLETLENRPRMLVDVRDVAEALVLLYEKGEAEGRYICTSHTMETRELVDALKKKYPDYSYPKTLSEGNEKAVSLSSEKLQGLGWKCRALEETLADAVKSFKDAGMLE 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1513021 1516211 - Cp4.1LG17g02290.1 Cpe17g00233 483551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00233 322 Pfam NAD dependent epimerase/dehydratase family 10 246 IPR001509 -
Cpe17g00233 322 Gene3D - 2 322 - -
Cpe17g00233 322 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 5 321 - -
Cpe17g00233 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 316 IPR036291 -
Cpe17g00233 322 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 321 - -
Cpe17g00233 322 CDD FR_SDR_e 10 299 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00773 Cpe-Chr12:7020793 Cpe17g00233 Cpe-Chr17:1513021 1.23E-84 dispersed
Cpe17g00233 Cpe-Chr17:1513021 Cpe20g00885 Cpe-Chr20:7916839 1.36E-82 dispersed
Cpe17g00231 Cpe-Chr17:1492490 Cpe17g00233 Cpe-Chr17:1513021 0 proximal
Cpe16g00372 Cpe-Chr16:5380868 Cpe17g00233 Cpe-Chr17:1513021 3.74E-70 transposed
Cpe12g00027 Cpe-Chr12:138279 Cpe17g00233 Cpe-Chr17:1513021 9.45E-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00233 - - bhj:120087265 553.903