Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00234 ATGAGAATGGCGGGGTACAGCGAAGAAGGAGGAGCGGGTTCACGCTACGTGCAACACCACCACCACCACCATCATCATCAACTTCTGAATCCGGAACTGCATCTGGACACGCCCTCCTCCTCCTCTATTCCATTTCCTCATCCTCATCTATTCAACCATTCCAATCACTCCGACGATGGTGATGATAATAATCATACTAATAATAATACTAATCCCTCTCAAAACCAACACGCCTCCCTTCGCCGCCCTCGTGGCCGTCCTCCTGGATCCAAAAACAAGCCCAAGCCTCCCGTTATCCTCACTCGCGATAGTCCCAACGTCCTCGGCTCTCATGTCCTCGAGGTCTCCGCCTCCGCTGATATCGTCGATAGTCTCTCCAATTACGCCCGCCGCAGAGGGAGAGGACTCAGCATCCTCTGCGGCACTGGTACTGTCGCCAACGTCACGCTCCGTCACCCATCTGCCTCTCCTGCGGCTACCGTCATCACTCTTCATGGCAGGTTCGAGATCCTCTCCCTCACAGGCACTGTGCTTCCCCCGCCAGCTCCCCCGCAGGCAGGTGGACTCTCTATATTCCTAGCCGGGGCACAAGGGCAGGTGGTTGGAGGGACGGTGGTGGGGCCCTTGGTGGCTTCGGGGACGGTGATTTTGATGGCGGCGTCCTTCTCCAACGCCGTGTTTGAAAGGTTGCCTGTGGAAGAAGAGGAGGAAGGGGGAGTGCAAGTTCAACCGACGGCGTCGCAGTCGTCGGGAGTGACCGGAGGCGGACAGATGGGGGAGGGCGGTGGGAATGCAAAGGAGGGGAGCGGCGGCGGAGTTGGGTTCCTGGGCAACAGTACAATAGCGGGATATCCTCCATTTGCAGGGGATTTGTTTGGTTGGGGAAGTGGAAGTGGAAGTGGAAGTGGGAATGCCACAAAGCCTCGTCAGTTGTAA 936 57.26 MRMAGYSEEGGAGSRYVQHHHHHHHHQLLNPELHLDTPSSSSIPFPHPHLFNHSNHSDDGDDNNHTNNNTNPSQNQHASLRRPRGRPPGSKNKPKPPVILTRDSPNVLGSHVLEVSASADIVDSLSNYARRRGRGLSILCGTGTVANVTLRHPSASPAATVITLHGRFEILSLTGTVLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVASGTVILMAASFSNAVFERLPVEEEEEGGVQVQPTASQSSGVTGGGQMGEGGGNAKEGSGGGVGFLGNSTIAGYPPFAGDLFGWGSGSGSGSGNATKPRQL 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1518658 1519593 + Cp4.1LG17g02070.1 Cpe17g00234 483552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00234 311 MobiDBLite consensus disorder prediction 1 104 - -
Cpe17g00234 311 MobiDBLite consensus disorder prediction 64 80 - -
Cpe17g00234 311 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 21 297 IPR014476 GO:0003680
Cpe17g00234 311 Gene3D - 110 250 - -
Cpe17g00234 311 Pfam Plants and Prokaryotes Conserved (PCC) domain 111 224 IPR005175 -
Cpe17g00234 311 MobiDBLite consensus disorder prediction 234 271 - -
Cpe17g00234 311 MobiDBLite consensus disorder prediction 33 48 - -
Cpe17g00234 311 CDD DUF296 111 222 IPR005175 -
Cpe17g00234 311 ProSiteProfiles PPC domain profile profile. 105 245 IPR005175 -
Cpe17g00234 311 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 21 297 - -
Cpe17g00234 311 MobiDBLite consensus disorder prediction 241 255 - -
Cpe17g00234 311 SUPERFAMILY AF0104/ALDC/Ptd012-like 107 236 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe17g00234 Cpe-Chr17:1518658 Cpe01g01079 Cpe-Chr1:6366461 2.70E-63 dispersed
Cpe12g00049 Cpe-Chr12:266568 Cpe17g00234 Cpe-Chr17:1518658 2.33E-59 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00234 - - cpep:111779195 467.233