Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe17g00251 | ATGGTAGAAGAGGAAAGAACTGAAGCAGGCTGGGATAGCAAGAAGGAGTTGACCATGACATCGACTTCTTCTGCTGGGGGGAAGCAACTGGCCGTGGTTGAAGCTCCTTCTAACTGTGTTCCATACCCGCCACCGCAAACGACGTATGAGGATCTCATAGCCGATCCCAAGCTCTTTATGGCGTCCTTGGAAAAGCTCCATTCTATTATGGGAACCAAGTTCATGATCCCCATTATTGGTGGGAAAGAACTGGACCTGCATCGGCTTTTCGTGGAGGTCACTGCTCGTGGTGGCCTTGAGAAGGTTATAAGAGAGAGAAGATGGAAAGAAGTAACTTCAGTTTTCAAATTTCCTTCGACAGCCACCAATGCATCTTTTGTGCTGAGGAAGTATTATCTCTCATTAATTCATCATTTTGAACAGATTTACTTCTTTAAAGCCGTGGGATGGACACCAAAAGTTTCTGATTCCTCTCCAACCCCAAGTGCAGTGCCAATTCCGACACAAGGGACGATGACCTCTATGTTGCCGCCATCCAATCGGCCAGCACCCCAGCAGCAGCCGCAGACTACTGCAACCGAACTTCCAGCAGTTGCTCCGAGTTCGGTACCACCAGCGGGAGGGTTTCCGGTGGTTGGAGTCATTGATGGAAAATTTGAAAGCGGATATCTCGTTACTGTTACTGTAGGAAATGAGAAGCTAAAAGGTGTGCTTTATATGACTCCTCCAGAGCAACCTGCTCAACAAGTGTTCCAGCCTGGTAGTGTTTTCACCAAAGATGGTACTACCTCCACTACACCAAATGCTCAGCGCCGTCGCCGGAGGAAGAAATCCGAGATCAAACGAAGGGATCCAGCTCATCCAAAGCCGAATAGAAGTGGCTACAATTTCTTCTTCGCCGAGCAGCATGCTAGACTCAAACCATTACATCCAGGGAAGGACAGGGAGATAAGCAGAATGATTGGTGAGCTTTGGAATAAACTTAATGAGTCTGAAAAAACAGTTTATCAGGAGAAAGCTATGAAAGATAAAGAACGATACAGAATTGAGATGGAGAATTACAGAGAGAAGCTGAGGACAGGCCAAATCATCAGTCATGCAGTGCCATTACAGCAGCTTCTTCCTGGGACAGACCTGAATATGGTCTATGCTGCTGACAAAAACGAAGAAACCGAGGGTGGCGAACATCCTCATATGCCGTATAATGATACAATTTATGTTGAAGATAAGGAGGAGGAGGAAGAAGAGGAAGAGGACGAGGACGACGATGAGGAAGAAGGTGCAGCAGCACCTCAAGGAGTTGGCAATGTGGATGTTAACGTCTTGGCTGAGGAGGAACGCTGCGAGACTAGACCAGAACCAACAACAACAGCCATTATACAAGAGAGTAGCACGGTCAAGGACGATAAGGAAGTTTTCGCCGGGCATTCAGTGGTAATGGTGGATGTGGCAAATGAAGAACCAGAACCAGAACCAACAGCAACAGCCATTGTAGAAGATAAGGAAGTTTTCGCCAGGGATTCGATGGTAATGGTGGTGGCTGCAAATGAAGAACCACAACCAACAGCTACAACCATTATAGAAGATAAGGAAGTTTTCGCCGGGGGTTCGATGGTAATGGTGGAGGCTGCAAATGAAGAACCACAACCAACAGCTACAACCATTATAGAAGATAAGGAAGTTTTTGCCGGAGATTCGATGGTAATGGTGGAGGCGGAAAATGAAGAACCAGAACCAACAACAGCAGCCATTATAGAAGATAAGGAGGTTTTCGCGGGGGATTCGGTGGTAATGATGGAGGTGGCAAATGAAGAACCAGAACCAACAACCGCAGCCATTGTAGAAGATAAGGAGGTTTTCGCCGGGGATTCGGTGGTAATGATGGAGGCGACAAATGAAGGAACAGAAGCAACAAGAAGAGACATTATAGAAGATAAGGAAGTTTTTGTGGGGGATTCGTTGATAATGATGGAGGCAGCAAAGGAAGAAGCAGAGCCAACAACAACAGCCATTACAGAAGATTAA | 2025 | 46.57 | MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSNRPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYMTPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKLRTGQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGEHPHMPYNDTIYVEDKEEEEEEEEDEDDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTTTAIIQESSTVKDDKEVFAGHSVVMVDVANEEPEPEPTATAIVEDKEVFARDSMVMVVAANEEPQPTATTIIEDKEVFAGGSMVMVEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMMEVANEEPEPTTAAIVEDKEVFAGDSVVMMEATNEGTEATRRDIIEDKEVFVGDSLIMMEAAKEEAEPTTTAITED | 674 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 1660205 | 1665958 | + | Cp4.1LG17g03310.1 | Cpe17g00251 | 483569 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe17g00251 | 674 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 15 | 6 | 422 | - | - | |
Cpe17g00251 | 674 | MobiDBLite | consensus disorder prediction | 251 | 268 | - | - | |
Cpe17g00251 | 674 | CDD | ARID_HMGB9-like | 55 | 140 | IPR045303 | GO:0003677 | |
Cpe17g00251 | 674 | SMART | bright_3 | 54 | 145 | IPR001606 | GO:0003677 | |
Cpe17g00251 | 674 | MobiDBLite | consensus disorder prediction | 156 | 197 | - | - | |
Cpe17g00251 | 674 | SUPERFAMILY | ARID-like | 49 | 153 | IPR036431 | GO:0003677 | |
Cpe17g00251 | 674 | SMART | hmgende2 | 287 | 356 | IPR009071 | - | |
Cpe17g00251 | 674 | Pfam | ARID/BRIGHT DNA binding domain | 57 | 140 | IPR001606 | GO:0003677 | |
Cpe17g00251 | 674 | MobiDBLite | consensus disorder prediction | 409 | 437 | - | - | |
Cpe17g00251 | 674 | ProSiteProfiles | HMG boxes A and B DNA-binding domains profile. | 288 | 355 | IPR009071 | - | |
Cpe17g00251 | 674 | SUPERFAMILY | HMG-box | 281 | 360 | IPR036910 | - | |
Cpe17g00251 | 674 | MobiDBLite | consensus disorder prediction | 156 | 200 | - | - | |
Cpe17g00251 | 674 | SMART | ARID_2 | 50 | 140 | - | - | |
Cpe17g00251 | 674 | Pfam | HMG (high mobility group) box | 288 | 355 | IPR009071 | - | |
Cpe17g00251 | 674 | Gene3D | High mobility group box domain | 272 | 367 | IPR036910 | - | |
Cpe17g00251 | 674 | Coils | Coil | 406 | 427 | - | - | |
Cpe17g00251 | 674 | Coils | Coil | 337 | 357 | - | - | |
Cpe17g00251 | 674 | MobiDBLite | consensus disorder prediction | 409 | 428 | - | - | |
Cpe17g00251 | 674 | CDD | HMGB-UBF_HMG-box | 288 | 352 | - | - | |
Cpe17g00251 | 674 | MobiDBLite | consensus disorder prediction | 251 | 294 | - | - | |
Cpe17g00251 | 674 | ProSiteProfiles | ARID domain profile. | 53 | 144 | IPR001606 | GO:0003677 | |
Cpe17g00251 | 674 | Gene3D | - | 46 | 148 | IPR036431 | GO:0003677 | |
Cpe17g00251 | 674 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 9 | 6 | 422 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00052 | Cpe-Chr2:275504 | Cpe17g00251 | Cpe-Chr17:1660205 | 1.87E-91 | dispersed | |
Cpe06g00043 | Cpe-Chr6:227366 | Cpe17g00251 | Cpe-Chr17:1660205 | 7.96E-29 | dispersed | |
Cpe08g01275 | Cpe-Chr8:9220943 | Cpe17g00251 | Cpe-Chr17:1660205 | 5.90E-08 | dispersed | |
Cpe03g00522 | Cpe-Chr3:3073926 | Cpe17g00251 | Cpe-Chr17:1660205 | 5.59E-10 | transposed | |
Cpe04g00073 | Cpe-Chr4:708226 | Cpe17g00251 | Cpe-Chr17:1660205 | 1.12E-09 | transposed | |
Cpe12g00084 | Cpe-Chr12:507908 | Cpe17g00251 | Cpe-Chr17:1660205 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50783 | PF01388 | ARID | 1.10E-16 | CL0123 | Cpe | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe17g00251 | - | - | cmax:111494342 | 1120.15 |