Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00281 ATGAGCGGCGGAGGTGAAGGAACGTCGCTGGAATTCACTCCGACATGGGTTGTTGCCGCCGTCTGCAGCGTCATCGTCGCCATTTCCCTCGCCTTAGAGCGTCTCCTTCACTTCCTTGGTACCTACCTCAAGAAGAAGAATCAGAAGCCGCTGAATGAAGCTCTACAGAAAGTTAAAGAAGAATTGATGCTCTTGGGGTTTATTTCGCTTCTGCTCACTGTATTTCAAGGCACTATCTCGAAATGGTGTGTTCCTGAGAGTTTGACTGAGCATTTACTTCCGTGTGATCTGAAAGATAAACCTAAAGCTGAAGAAGATGAACATGGTTCATCGACGACGGAGCATTTTCAAACATTCTTTGTTTCAAGCATTTCTGGCACGGCTAGGCGCCTTCTATCTGAGGGATCGGCTTCACAGAATGGCTACTGTGCTCATAAGGATAAGGTGCCATTGCTATCACTTGAAGCATTGCATCATCTACATATTTTTATCTTCATCCTGGCTATTGTCCACGTGACATTTTGTGTTCTTACTGTGGTTTTTGGAGGATTGAAGATTCGTCAGTGGAAAGCTTGGGAGGATTCTATTGCGAAAGAGAATTACGATGCCGAAGACGTTCTAGAACCAAAAGTCACCCATGTCCATCAGCATGCTTTTATCAAAGACCACTTCCAGGGCATTGGTAAAGATTCAGCTCTTCTTGGTTGGTTGCGTTCCTTCCTCAAGCAATTTTATGCTTCTGTAACAAAAGCAGATTATGTGACGTTACGACTTGGTTTCATTATGACACACTGCAGGGGAAACCCCAAGTTTAATTTTCACAAGTACATGATACGTGCCCTTGAGGATGATTTCAAGCATGTTGTCGGTATCAGGCAAGTGAATATCTGGAATTGGTATCTTTGGATCTTCGTGGTTGTCTTCTTGCTCCTTAATATTAACGGCTGGCATACATATTTCTGGATAGCATTCATTCCTCTTATTCTTCTGCTTGCTGTGGGAGCCAAGCTGGAACATGTGATAGCCCAGCTGGCTCATGAGGTTGCAGAGAAGCATATAGCAATCGAAGGTGATCTGGTAGTCCAACCATCTGACGATCACTTTTGGTTTCAGCGACCCCGTATCGTTCTCTTCTTGATCCATTTTATACTTTTCCAAAACGCTTTCGAGATTGGATTTTTCTTCTGGATATGGGTTCAATATGGCTTCGACTCGTGCATCATGGGAAAAGTCGCCTATATCATTCCTAGGCTTATTATTGGGGTGTTTGTTCAGGTTCTTTGCAGTTACAGCACCCTGCCGCTCTACGCTATCGTCACGCAGATGGGAAGTTCTTTCAAGAAAGCAATCTTTGAAGACCATGTACAAGTAGGTCTAGTTGGGTGGGCTCAGAAGGTGAAGAAAAGGAAGGGACTGAAAGCAGCAGCTACTGATGGCTCCAGCCACGGAAGCAAGGAAGCCGGGTCTAGTGTGGGGATTCAGCTGGGAAATGTTCTGCGCAAGGCTTCTACTGCACCAACAGAAATTAAGCCTGATGCCTCCAAATCAAATGATCTGCCTTAG 1563 44.98 MSGGGEGTSLEFTPTWVVAAVCSVIVAISLALERLLHFLGTYLKKKNQKPLNEALQKVKEELMLLGFISLLLTVFQGTISKWCVPESLTEHLLPCDLKDKPKAEEDEHGSSTTEHFQTFFVSSISGTARRLLSEGSASQNGYCAHKDKVPLLSLEALHHLHIFIFILAIVHVTFCVLTVVFGGLKIRQWKAWEDSIAKENYDAEDVLEPKVTHVHQHAFIKDHFQGIGKDSALLGWLRSFLKQFYASVTKADYVTLRLGFIMTHCRGNPKFNFHKYMIRALEDDFKHVVGIRQVNIWNWYLWIFVVVFLLLNINGWHTYFWIAFIPLILLLAVGAKLEHVIAQLAHEVAEKHIAIEGDLVVQPSDDHFWFQRPRIVLFLIHFILFQNAFEIGFFFWIWVQYGFDSCIMGKVAYIIPRLIIGVFVQVLCSYSTLPLYAIVTQMGSSFKKAIFEDHVQVGLVGWAQKVKKRKGLKAAATDGSSHGSKEAGSSVGIQLGNVLRKASTAPTEIKPDASKSNDLP 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1879666 1889657 + Cp4.1LG17g02980.1 Cpe17g00281 483599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00281 520 Pfam Mlo family 8 493 IPR004326 GO:0006952|GO:0016021
Cpe17g00281 520 PANTHER MLO-LIKE PROTEIN 1 505 - -
Cpe17g00281 520 PANTHER MLO-LIKE PROTEIN 1 1 505 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g01027 Cpe-Chr14:8635883 Cpe17g00281 Cpe-Chr17:1879666 1.15E-78 dispersed
Cpe17g00281 Cpe-Chr17:1879666 Cpe19g00902 Cpe-Chr19:6561344 6.91E-136 dispersed
Cpe20g00762 Cpe-Chr20:6767263 Cpe17g00281 Cpe-Chr17:1879666 2.64E-112 dispersed
Cpe06g00699 Cpe-Chr6:4338901 Cpe17g00281 Cpe-Chr17:1879666 2.15E-110 transposed
Cpe13g00919 Cpe-Chr13:7798528 Cpe17g00281 Cpe-Chr17:1879666 1.19E-126 transposed
Cpe16g00095 Cpe-Chr16:1779563 Cpe17g00281 Cpe-Chr17:1879666 8.43E-61 transposed
Cpe12g00039 Cpe-Chr12:208190 Cpe17g00281 Cpe-Chr17:1879666 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00281 K08472 - csv:101211868 912.524