Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00288 ATGAAAATAAAACACAGAAAACCTCAAAATTTGCCCCTTCTTCCCGTCACAAAACAGAGAAGGATGATGAACCAACCTGGGAAATGGGTGGCGCTGGTGGCGGCCATATGGATTCAGGCATTTACAGGCACAAATTTTGATTTCCCCTCTTATTCTTCCAATCTGAAGGCGGCTTTGGGGATGTCGCAGGTAGAGCTTAACTATCTGGCGGTGGCTTCTGACGTCGGTAAGGCCTTTGGGTGGTGCTCTGGCATCGCTCTCTTGTATTTTCCTTTGTGGGTGGTGATGCTCATGGCTGCTTCCATGGGGTTTCTTGGCTATGGCCTTCAATGGCTTCTCCTTCAAGGGATTGTATCTCTGCCTTACTCCATGGTATATCTTCTCTGCTTGTTGGCTGGATGTAGTATTTGCTGGTTTAATACGATCTGCTATGTCTCCTGCATCCAGAAGTTCCCAGCCAATCGCGCGCTTGCATTGTCCTTGATTGTCAGCTTCAATGGCGTCAGTGCAGCTCTTTACACTCTAATGGCCAATGCAGTAGACCCTAATGATGCAAGCTTGTACCTTCTCCTAAATGCATTGGTTCCTCTCATAATCTCTGTTGTTACCTTCCTCCCAATCCTTCATCAGCCACCGGCTCAGCCGTCGTCTTCCGATGCCACCCGCAATGACTCCCACACTTTCATCTGCTTATACATTACCGCAGTTATCACAGGCCTATATCTAATCACCTTCAATTCCACGCCTTCCAGCAAGTACGGTGCCCAACTTTTGTTAGCTGGGGCTTTTGCCCTGTTACTAGTTCCTCTTTGTCTGCCTGGAATTTGGAGCACTCACAAGTGGTTGTTTCGGATTGCATCCACTGGCTTGAGCAGTGTTCTTCACTTTAGATTCAACCTTGTCAATCATGAGCTTCAGCAGGAGCTCATCAATCTTGAAACAGAAAGAAGTGGCACGAATGTCATCACCCCTTTTGATTATAAAGAGAAGGAAAGCATTTCAAGGAAGATGATGGGGAAAGAGAATTTGACAGTTCTTGAAGAAGAGCATTCAGCTAAGATGCTCGTACGACGCTTGGACTTTTGGCTCTATTTTGTTGCATACTTTTGTGGTGGGACAATTGGGTTGGTTTACAGCAACAATCTTGGGCAGATCTCGCAGTCACTAGGATACAGTTCCTTAACAAGCTCACTTGTAACACTCTACTCGTCTTGCTCCTTCTTTGGGCGGCTAATCTCAGCAGGCCCAGATTTCATGCGTGAAAAGGTGCACTTCGCTAGAACGGGATGGCTAGCCCTAGCTTTAGTGCCAACTCCAATCGCCTTCATTTTACTCGCTGCATCAGGTAGCGAGATCGCATTACAAATTGGCACTGGCTTGATCGGTCTAAGCTCGGGATTCATGTTCTCAGCTTCGGTCTCAATCACATCAGAGTTATTCGGACCAAACAGCTCAGGCGTCAATCACAACATCCTCATCACCAACATCCCTCTCGGCTCGTTCCTCTACGGCGTCCTGGCGGCAGTTTCATACGACTCCACTGCCGGAAGTTCAGACCAAACTGCGGCGGCGCTTGGGGACGTGGTGGTGTGCATCGGCCGAAAATGCTATCTACAAACCTTCATATGGTGGGCTTGCATCTCCATCGTCGGTCTCGCTTCTAGCTTCTTGCTTTTCCGACGGACGAAACCGGCATACGACCGCCAGTACGAGAGTAACCCAAGCAAGACACAGCCATTTTAG 1743 48.31 MKIKHRKPQNLPLLPVTKQRRMMNQPGKWVALVAAIWIQAFTGTNFDFPSYSSNLKAALGMSQVELNYLAVASDVGKAFGWCSGIALLYFPLWVVMLMAASMGFLGYGLQWLLLQGIVSLPYSMVYLLCLLAGCSICWFNTICYVSCIQKFPANRALALSLIVSFNGVSAALYTLMANAVDPNDASLYLLLNALVPLIISVVTFLPILHQPPAQPSSSDATRNDSHTFICLYITAVITGLYLITFNSTPSSKYGAQLLLAGAFALLLVPLCLPGIWSTHKWLFRIASTGLSSVLHFRFNLVNHELQQELINLETERSGTNVITPFDYKEKESISRKMMGKENLTVLEEEHSAKMLVRRLDFWLYFVAYFCGGTIGLVYSNNLGQISQSLGYSSLTSSLVTLYSSCSFFGRLISAGPDFMREKVHFARTGWLALALVPTPIAFILLAASGSEIALQIGTGLIGLSSGFMFSASVSITSELFGPNSSGVNHNILITNIPLGSFLYGVLAAVSYDSTAGSSDQTAAALGDVVVCIGRKCYLQTFIWWACISIVGLASSFLLFRRTKPAYDRQYESNPSKTQPF 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1917540 1920324 + Cp4.1LG17g02850.1 Cpe17g00288 483606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00288 580 PANTHER NODULIN-LIKE/MFS TRANSPORTER 23 574 - -
Cpe17g00288 580 Pfam Nodulin-like 28 273 IPR010658 -
Cpe17g00288 580 SUPERFAMILY MFS general substrate transporter 21 565 IPR036259 -
Cpe17g00288 580 Gene3D MFS general substrate transporter like domains 325 534 IPR036259 -
Cpe17g00288 580 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 23 574 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00438 Cpe-Chr14:2749558 Cpe17g00288 Cpe-Chr17:1917540 0 dispersed
Cpe17g00288 Cpe-Chr17:1917540 Cpe20g00903 Cpe-Chr20:8006873 7.94E-85 dispersed
Cpe17g00288 Cpe-Chr17:1917540 Cpe17g00289 Cpe-Chr17:1920828 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00288 - - csv:101222963 943.34