Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00327 ATGGACAATTACGGTTCTTCGCCATCGTATCCATACCACAATCCATATGCATACCCTTGTTCAGCTCCCCGTCAATACCCACCTGCTTCTCAATATCCACCTTCTCAATATCTACATCCTCATTATGCACATCCAAGTTTCGATCCATATGGTCGTCCTCTTTACCCTTACCCCTATAGTCCTTCACATGTCGCTCCATATGCGTATCCCCCACACCCATCCCATTCTGGGTTAATAGAGTATATTCAACATCCACCTTCGTATTCTGGTCTTGTATCTTACCCTTATCCTTACCCTGATGCCTCATCGCCTAATAGTGGTGCTAGGCCATCCATTCATTATCATAGCAATTTCCAACATGGTACATCCCCATATCGGTATCAAGAATCTGTTGCATACCCTTCACCAGAAACTCAATACCGACCACCCCCTTCACGAGTAAATAGCTTCTCTAGTCACTACAGGATGGATAACACTGATTCAGGCTCTTCTGCTCACCTGCCTATTGATGACCTTTTGTGCAATGTACATTTGTCTGATCATCAACCAACTGCCCCTGCTTCACCTCCTGCACCTGTACCTGCACAACCTTCAGCTTCGTTATTGGCGAATTCTCCTCAAAGTATGAGATATGATCGGCGCGATCGATTTTATGGCTTTCCCAATTCATCCTTTTCTAGTTTCGATGTGGGGAATTCAGATCAATTGACTGCATCCAAGCAACCTTTGTTTTCCCATTCAAGCTCATTTGGTGGGTCTCAACATAATCAGAACTTGCAGATTGTTCCATTGCACAGTAAAACATCATTGAAAGTTTTGCTGTTACATGGAAACTTAGAAATATGGATTAACGAGGCCAGAAATCTTCCAAATATGGACATGTTTCACAAAACCTTGGGGGATATGTTTGCTAAATTACCTGGCAAAATTGAAGGACGCGTGAGTCATAAGATCACTAGTGACCCTTATGTATCGATATCTGTAGCAAATGCAATAATTGGGAGGACTTTTGTTATAAGCAACAATGAAAACCCTGTATGGAGGCAACATTTCTATGTTCCCGTTGCACATTATGTTGCTGAAGTACTTTTTTTCGTTAAAGACAGTGATGTTGTTGGTTCACAGCTAATAGGAACTGTAGCAATTCCTGCAGAACAAATATATTCAGGGTCTATAGTTGAGGGAACCTTCCCAATCCTAAATAATGGGAAGCCATGTAAACCTGGAGCTGCACTGAACTTTTCTATTCAATATACCCCAATGGAGAGGCTCAGTGCTTATCATCATGGAGTGGGAGCTGGTCCTGATTATCAGGGAGTTCCTGATACATATTTCCCCCTCAGAAAGGGTGGAGCTGTTACTCTTTATCAAGATGCTCATGTTCCAGACGGCCACCTTCCAAATTTGATGCTTGATAATGGTATGTACTATGTACATGGGAAATGTTGGCATGACATCTTTGATTCCGTACGTCAGGCTCGCAGGTTAATTTACATAACTGGGTGGTCAGTGTGGCACAAAGTGAAACTAGTTCGAGATACTGGCTATGGGACAGAGTGTACCCTTGGAGATCTCCTGAGGTCCAAGTCCCAGGAGGGAGTGAGAGTTCTGCTTCTTGTTTGGGACGATCCCACTTCTAGGAGCATTTTGGGTTATAAAACCGATGGTTTCATGCAAACCCATGATGAGGAAACTCGCAGGTTTTTCAAACACTCCTCCGTTCAAGTGATACTTTGTCCTCGCATGGCTGGAAAACGACATAGTTGGGTTAAGCAAAAGGAAGTTGGAACTATTTATACCCACCATCAGAAAACGGTTATTGTGGATGCTGATGGTGGAAATAATAGAAGAAAAATCATAGCTTTTGTTGGAGGACTTGATTTATGCGACGGCCGGTATGATACTCCATCACATCCCATATTTCGGACACTTCAAACAGTACACAAGGATGATTACCACAATCCTACATACACGGGTAGTGCTGTTGGTTGTCCAAGAGAACCATGGCATGATCTGCACAGCAAAATTGATGGTCCAGCAGCATACGATGTTTTGACGAATTTTGAGGAGAGATGGAGGAGGGCTTCAAAACCTCATGGGATAAAGAAGTTGAAATCATATGATGACGCTTTGCTGCGGATTGAAAGAATTCCCGACATAATTGGAATTTCGGAATCTTACTGCACTAATGAAAATGACCCTGAATCATGGCATGTCCAGAACCTTGTATGTGGAAAGAATGTGCTGATTGACATGAGTATACACACAGCATATGTGAAAGCCATCCGAGCTGCCCAACATTACATTTATATAGAGAACCAATATTTTATTGGGTCATCCTTCAATTGGAACTCAAACAAAGATTTAGGTGCCAACAATTTGATCCCAATGGAAATTGCACTAAAGATTGCTGATAAAATCAGAGCAAATGAGAGGTTTGCTGCATATATTCTCATTCCCATGTGGCCGGAGGGCGTTCCAACTGCTGCTGCCACTCAGAGGATATTATTTTGGCAGCAAAAAACGATGCAAATGATGTATGAAGTCATCTATAAGGCTTTGATGGAGGTTGGTCTTGAGGATGCATTCTCTCCTCAAGACTATTTGAACTTCTTCTGCCTGGGAAATCGTGAGGCTACGGAGGGAAATGATTCTTTGTGTTCTGAAAGTCCTACTGCAGAAAACACCCCTCAGGCACTTAGTCGGAAAAGCAGAAGGTTTATGGTATACGTTCACTCCAAAGGCATGATAGTTGACGACGAGTTTGTGATTTTGGGATCTGCTAACATCAACCAGAGGTCCATGGAAGGAACTAGAGACACTGAGATTGCTATGGGAGCCTATCAACCTCACTATACGTGGGCAAGGAAAGTTTCACGTCCTCGTGGACAGATCTATGGATATCGGATGTCGTTGTGGGCGGAGCATACGGGAACTATGGAAGACTGTTTCAACCAACCAGAGAGCCTGGAATGCGTGAAAAAACTTAGAACAATTGGAGAATCAAACTGGAAACAATTTGCTGGAGAAGATGTAACAGAGATGAGAGGACATCTTCTGAAGTACCCTGTTGAAGTTGATAGAAGAGGGAGAGTAAGATCTCTTCCTGGACATGAAAACTTCCCAGACGTAGGAGGAAAAATAGTTGGTTCATTTCTTGGCATTCATGAGAACCTCACTATCTAA 3186 42.84 MDNYGSSPSYPYHNPYAYPCSAPRQYPPASQYPPSQYLHPHYAHPSFDPYGRPLYPYPYSPSHVAPYAYPPHPSHSGLIEYIQHPPSYSGLVSYPYPYPDASSPNSGARPSIHYHSNFQHGTSPYRYQESVAYPSPETQYRPPPSRVNSFSSHYRMDNTDSGSSAHLPIDDLLCNVHLSDHQPTAPASPPAPVPAQPSASLLANSPQSMRYDRRDRFYGFPNSSFSSFDVGNSDQLTASKQPLFSHSSSFGGSQHNQNLQIVPLHSKTSLKVLLLHGNLEIWINEARNLPNMDMFHKTLGDMFAKLPGKIEGRVSHKITSDPYVSISVANAIIGRTFVISNNENPVWRQHFYVPVAHYVAEVLFFVKDSDVVGSQLIGTVAIPAEQIYSGSIVEGTFPILNNGKPCKPGAALNFSIQYTPMERLSAYHHGVGAGPDYQGVPDTYFPLRKGGAVTLYQDAHVPDGHLPNLMLDNGMYYVHGKCWHDIFDSVRQARRLIYITGWSVWHKVKLVRDTGYGTECTLGDLLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGFMQTHDEETRRFFKHSSVQVILCPRMAGKRHSWVKQKEVGTIYTHHQKTVIVDADGGNNRRKIIAFVGGLDLCDGRYDTPSHPIFRTLQTVHKDDYHNPTYTGSAVGCPREPWHDLHSKIDGPAAYDVLTNFEERWRRASKPHGIKKLKSYDDALLRIERIPDIIGISESYCTNENDPESWHVQNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWNSNKDLGANNLIPMEIALKIADKIRANERFAAYILIPMWPEGVPTAAATQRILFWQQKTMQMMYEVIYKALMEVGLEDAFSPQDYLNFFCLGNREATEGNDSLCSESPTAENTPQALSRKSRRFMVYVHSKGMIVDDEFVILGSANINQRSMEGTRDTEIAMGAYQPHYTWARKVSRPRGQIYGYRMSLWAEHTGTMEDCFNQPESLECVKKLRTIGESNWKQFAGEDVTEMRGHLLKYPVEVDRRGRVRSLPGHENFPDVGGKIVGSFLGIHENLTI 1061
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2226890 2236373 + Cp4.1LG17g02440.1 Cpe17g00327 483645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00327 1061 PANTHER PHOSPHOLIPASE D ALPHA 1 159 1061 - -
Cpe17g00327 1061 SMART C2_3c 278 396 IPR000008 -
Cpe17g00327 1061 Gene3D Endonuclease Chain A 475 710 - -
Cpe17g00327 1061 Pfam PLD-like domain 908 943 IPR025202 -
Cpe17g00327 1061 SUPERFAMILY Phospholipase D/nuclease 438 697 - -
Cpe17g00327 1061 MobiDBLite consensus disorder prediction 142 162 - -
Cpe17g00327 1061 SUPERFAMILY Phospholipase D/nuclease 739 993 - -
Cpe17g00327 1061 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 597 632 IPR001736 GO:0003824
Cpe17g00327 1061 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 275 420 IPR035892 -
Cpe17g00327 1061 Gene3D C2 domain 272 406 IPR035892 -
Cpe17g00327 1061 Gene3D Endonuclease Chain A 725 956 - -
Cpe17g00327 1061 SMART pld_4 907 934 IPR001736 GO:0003824
Cpe17g00327 1061 SMART pld_4 597 632 IPR001736 GO:0003824
Cpe17g00327 1061 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 907 934 IPR001736 GO:0003824
Cpe17g00327 1061 MobiDBLite consensus disorder prediction 180 202 - -
Cpe17g00327 1061 MobiDBLite consensus disorder prediction 134 162 - -
Cpe17g00327 1061 Pfam Phospholipase D C terminal 981 1051 IPR024632 -
Cpe17g00327 1061 CDD C2_plant_PLD 271 419 - -
Cpe17g00327 1061 ProSiteProfiles C2 domain profile. 255 397 IPR000008 -
Cpe17g00327 1061 Pfam C2 domain 277 399 IPR000008 -
Cpe17g00327 1061 PANTHER PHOSPHOLIPASE D 159 1061 IPR015679 -
Cpe17g00327 1061 Pfam Phospholipase D Active site motif 598 632 IPR001736 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00791 Cpe-Chr8:6274287 Cpe17g00327 Cpe-Chr17:2226890 0 dispersed
Cpe17g00327 Cpe-Chr17:2226890 Cpe19g00883 Cpe-Chr19:6467980 0 dispersed
Cpe12g00003 Cpe-Chr12:10623 Cpe17g00327 Cpe-Chr17:2226890 1.27E-67 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00327 K01115 - csv:101218942 1895.17