Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00367 GCCCCAATATCGACTGTAACAAAGCAACTCACCATGGCTTCTCTTCTTCTCTTCCTCCTCCTTGTTGTCTTCACTCTCCCATCGGTCTCCCTTGCCGTCACGAAAGCTGAAGTTTCGTATCTCGTTGGTCGTCAACTTTTGGCTCTAAGAGAACACGATGAACTCCCAGATGACTATAAATATGATGCTGAAATTGATCCTCATGAAACTTTCCTAAATGAGAGGTTGAAGAAGGCTTTTGTTGCCCTCAAAGCTTGGAAAACCGCCATATATTCTGACCCATATAACTTCACTGAAAATTGGGTTGGCAATGACGTCTGTCTTTATAGGGGCGTTTTTTGTACTACGGCGCTTGATGACTCCACCGTTGAGGTTGTGGCTGGCATTGATTTGAACCATGCTGACATTGCAGGCTACCTGCCACCCGAGCTTGGACTCTTGACAGATTTGGCATTGTTCCATATCAACTCTAATAGGTTTTGTGGGATAATTCCTCGTAGCTTTTCTAAGCTCACTCTCATGTTTGAGTTCGACGTCAGTAACAACCGGTTCGTTGGCCATTTTCCAGAGGTTGTCTTTCATTGGCGTATCGCTAAGTTCCTCGATCTTAGGTTCAACGACTTTGAAGGAGAAGTCCCACCAGCACTCTTCACTATGACCTTCGACGCCATATTCTTAAACAACAATAGATTTAGTTCCTTAATCCCGGATACCATTGGAAACTCCACTGTCTCCCTTGTGTCCTTTGCGTACAACTACTTCCATGGCTGCATTCCTAGTTCGGTCGGCCAAATGACCAGCCTCAACCAGGTTCTCTTTATCGGCAACAAACTCCATGGCTGTCTTCCAGTCGAGATCGGAAAGCTTGTCAATCTAACGGTTCTTGATATCAGCAATAATAGCTTTCCTGGCTGGTTGCCCGCATTGTCGGGGCTCAAGAATTTGCAGTATCTGGACGTTAGTTACAATGAATTTAGAGGCTCTGTTTCTGGGGAGATATGCAAATTGCCCCATTTGGGTAACTTTAATTTCTCCTTTAATTATTTTGATCAGCAAGATGCAAAGTGTGTGGCACCTAAAGATTCAAAAAAGGTTTTTGATGATGTTCATAATTGCTTACTTAATCGCCCGGAGCAAAGAGATGCTGAGACTTGTAGCTCTTTTATGATGAAATCGGTGGAGTGTAGAAATTGTGTTCCATCCTCACCTCCTCATCATCACGCGGGCGCACCCCCTGCTCCCCAAGTTGAGACTCACGCGGGCGCACCCCCTGCTCCCCAAGTTGAGGCTCCATCGGGCGGACCCCCTGCTCCCCAAGTTGAGGCTCCATCGGGCGGACCCCCTGTCACCCAAGTTGAGGCTCCATCGGGCGCGCCCCCTGTCACCCAAGTTGAGGCTCCATCGGGCGCGCCCCCTGTCACACAAGTTGAGGCTCCATCGGGCGCGCCCCCTGTCACACAAGTTGAGGCTCCATCGCCCCCTGCCACCCAAGTTGAGGCTCCATCGCCCCCTGCCACCCAAGTTGAGGCTCCATCGCCCCCTGCCACCCAAGTTGAGGCTCCATCGCCCCCTGCCACCCAAGTTGAGGCTCCATCGCCCCCTGCCACCCAAGTTGAGGCTCCATCGCCCCCTGCCACCCAAGTTGAGGCTCCATCGCCCCCTGCCACCCAAGTTGAGGCTCCATCGCCCCCTGCCACCCAAGTTGAGGCTCCATCGGGCGCACCCCCTGTCACCCAAGTTGCTCCATCGGGCGCACCCCCTGTCACCCAAGTTGCTCCATCGGGTGCACCCCCTGCCACCCAAGTTGAGGCTCCATTGGGCGCACCCCATATTTCTGAACCCCCTGCTCCGTCGGGCGCACCCCCTGTCACCCAAGTTGAGGCTCCGTCGGGCGCACCCCCTGTCACCCAAGTTGAGGCTCCGTCGGGCGCACCCCCTGCCACCCAAGTTGAGGCTCCGTCGGGCGCACCCCCTGCCACCCAAGTTGAGGCTCCATCGGGCGGACCCCCTGTCGCCCAAGTTGAGGCTCCATCGGGCGGACCCCATATTTCCGAACCCCCTGTCTCCCAAGCTCCGTCGGGCGCACCCCCTGCCAAACAAGTTGAGGCTCCGTCGGGCGCACCCCCTATTTCTGAACCCCCTGTCTCCCAGGTTGCGGCTCCATCGGGCGCACCCCCTGTCACCCAAGTTGAGGCTCCGTCGGGCGCACCCCCTGCCACCCAAGTTGAGGCTCCGTCGGGCGCACCCCCTGCCACCCAAGTTGAGGCTCCGTCGGGCGGACCCCCTGTCGCCCAAGTTGAGGCTCCATCGGGCGGACCCCATATTTCCGAACCCCCTGTCTCCCAAGCGCCATCGGGCGGACCCCCAGCGTCCCAAGTTGAGGCGCCATCGGGCGGACCCCCAGCGTCCCAAGTTGAGGCGCCATCGGGCGGACCCCCAGCGTCCCAAGTTGAGGCGCCATCGGGCGGACCCCCAGCGTCCCAAGTTGAGGCGCCATCGGGCGGACCCCCAGCGTCCCAAGTTGAGGCGCCATCGGGCGGACCCCCAGCGTCCCAAGTTGAGGCGCCATCGGGCGGACCCCCAGCGTCCCAAGTTGAGGCGCCATCGGGCGGACCCCCAGCGTCCCAAGTTGAGGCGCCATCGGGCGGACCCCCAGCGTCCCAAGTTGAGGCGCCATCGGGCGGACCCCCAGCGTCCCAAGTTGAGGCGCCATCGGGCGGACCCCCAGCGTCCCAAGTTGAGGCGCCATCGGGCGGACCCCCAGCGTCCCAAGTTGAGGCGCCATCGGGCGGACCCCCAGCGTCCCAAGTTGAGGCGCCATCGGGCGGACCCCCAGCGTCCCAAGTTGAGGCGCCATCGGGCGGACCCCCAGCGTCCCAAGTTGAGGCGCCATCGGGCGGACCCCCAGCGTCCCAAGTTGAGGCGCCATCGGGCGGACCCCCAGCGTCCCAAGTTNCCGCGTCTCCTCCGCCACCCGTCCCCTCTCCCCCACCTCCGACCGCGTCTCCTCCGCCACCCGTCCCCTCTCCCCCACCTCCGACCGCGTCTCCTCCGCCACCCGTCCCCTCTCCCCCACCTCCGACCGCATCTCCTCCACCACCCGTCCCCTCTCCCCCACCTCGGACCGCATCTCCTCCTCCTCCTGGCGCTTCTCCACCACCGGCGTTGGATGATCTCATCCTACCGCCAAACATTGGTTTCCAATATGCATCTCCACCACCACCACAAGAACACGATGAACTCCCAGATGACTACAAATATGAAGTTGAAGTTGATTCTCACGAAACTTTCTTAAATGAGAGGTTGAAGAAGGCTTTTGTTGCCCTTAAAGCTTGGAAAGCCGCCATGTATTCTGACCCATATAACTTCACTGAAAATTGGGTTGGCAATGATGTCTGTCTTTATAGGGGTGTTTTTTGTACTACGGCTCTTGATGACTCCACTGTTGAGGTTGTGGCTGGCATTGATTTGAACCATGCTGACATTGCAGGCTACTTGCCACCTGAGCTTGGACTCTTGACAGATTTGGCGTTGTTCCATATCAACTCTAATAGGTTTTGTGGGATAATTCCTCATAGCTTTTCTAAGCTCACTCTCATGTTTGAGTTTGATGTCAGTAACAATCGGTTCGTTGGCCATTTTCCAGAGGTTGTCTTTTATTGGCGTATCGCTAAGTACCTCGATCTTAGGTTCAACGACTTTGAAGGAGAGATCCCACCGGCACTTTTCACTATGACCTTCGACGCTATATTCTTAAACAACAATAGATTCAGTTCCTTCATCCCGGATACCATTGGAAACTCCACTGTCTCCGTTGTGTCCTTTGCGTATAACTACTTCCATGGCTGCATTCCTAGTTCGGTCGGCCAAATGAGCAGCCTCAAGCAGGTTCTCTTCATTGGCAACAACCTCGATGGCTGTCTCCCAGTCGAGCTTGGAAAGCTTGTCAATGTAACGGTGCTTGATATCAGCAACAATAGCTTTCCTGGTTGGTTGCCCACGTTGTCGGGACTCAAGAATTTGCAGTGGCTTGATGTTAGTCACAATGAATTCAGGGGCTCTGTTTCTGCAGAGATATGCAAATTACCTCATTTGGATAACTTTACTTACTCCTTTAATTATTTTAATCAGCAAGATGGAGAGTGTGTGACATCTAAGGATTCAAAAAAGATTTTTGGTGATGTTCATAATTGCTTGCCCAATCGCCCGGAGCAGAGAGATGCTGAAAGTTGTAGCTCTTTTATGATGAAGTCGTTAATCAATCTCCGACCAATCCGGTACGGGTTCGTAGGCAGCCACCTTCAGAATCGGGCGAACCCCCAGTTCCATCCTCACCTCCTCATCATCATCATCATCATCATCATGAATTCCATCATCACCGCCAACGACCGAATCTCCACCGCCAACGACCGAATCTCCACCGCCAACGACCAAATCTCCTCCGCCGACGACCGAATCTCCTCCGCCGACGACCGAATCCCCACCGCCGACGACCGAATCCCCACCGCCACCCTCTACTCTCCCCCACCTCCTACCGCATCTCCACCGCCACCAGTCTACTCTCCCCCACCTCCTACCGCATCTCCACCGCCACCAGTCTACTCTCCCCCACCTCCGACCGCATCTCCACCGCCACCAGTCTACTCTCCCCCGCCCCCGACCGCATCTCCACCGCCACCAGTCTACTCTCCACCGCCACCAGTCTACTCTCCACCACCACCACCACCAACCGCATCTCCACCGCCACCCGTCCACTCTCCACCGCCACCCGTCTACTCTCCACCGCCACCCGTCCACTCTCCACCGCCACCCGTCTACTCTCCACCGCCACCCATCTACTCTCCACCGCCACCCGTTCACTCTCCACCGCCTCCGACTGCATCTCCACCGCCACCCGTCCACTCTCCACCTCCTCCGACCGCATCTCCACCGCCACCCGTCCACTCTCCCCCACCTCCTACCGCATCTCCACCGCCACCCACCGCATCTCCTCCTCCTCCTCCTGGCGCTTCTCCACCACCGGCGTTCGAAGATCTAATCCTACCACCAAACATTGGTTTCCAATATGCATCTCCACCACCACCACAGTTCCCCGGATATTGA 5103 56.67 APISTVTKQLTMASLLLFLLLVVFTLPSVSLAVTKAEVSYLVGRQLLALREHDELPDDYKYDAEIDPHETFLNERLKKAFVALKAWKTAIYSDPYNFTENWVGNDVCLYRGVFCTTALDDSTVEVVAGIDLNHADIAGYLPPELGLLTDLALFHINSNRFCGIIPRSFSKLTLMFEFDVSNNRFVGHFPEVVFHWRIAKFLDLRFNDFEGEVPPALFTMTFDAIFLNNNRFSSLIPDTIGNSTVSLVSFAYNYFHGCIPSSVGQMTSLNQVLFIGNKLHGCLPVEIGKLVNLTVLDISNNSFPGWLPALSGLKNLQYLDVSYNEFRGSVSGEICKLPHLGNFNFSFNYFDQQDAKCVAPKDSKKVFDDVHNCLLNRPEQRDAETCSSFMMKSVECRNCVPSSPPHHHAGAPPAPQVETHAGAPPAPQVEAPSGGPPAPQVEAPSGGPPVTQVEAPSGAPPVTQVEAPSGAPPVTQVEAPSGAPPVTQVEAPSPPATQVEAPSPPATQVEAPSPPATQVEAPSPPATQVEAPSPPATQVEAPSPPATQVEAPSPPATQVEAPSPPATQVEAPSGAPPVTQVAPSGAPPVTQVAPSGAPPATQVEAPLGAPHISEPPAPSGAPPVTQVEAPSGAPPVTQVEAPSGAPPATQVEAPSGAPPATQVEAPSGGPPVAQVEAPSGGPHISEPPVSQAPSGAPPAKQVEAPSGAPPISEPPVSQVAAPSGAPPVTQVEAPSGAPPATQVEAPSGAPPATQVEAPSGGPPVAQVEAPSGGPHISEPPVSQAPSGGPPASQVEAPSGGPPASQVEAPSGGPPASQVEAPSGGPPASQVEAPSGGPPASQVEAPSGGPPASQVEAPSGGPPASQVEAPSGGPPASQVEAPSGGPPASQVEAPSGGPPASQVEAPSGGPPASQVEAPSGGPPASQVEAPSGGPPASQVEAPSGGPPASQVEAPSGGPPASQVEAPSGGPPASQVEAPSGGPPASQVXASPPPPVPSPPPPTASPPPPVPSPPPPTASPPPPVPSPPPPTASPPPPVPSPPPRTASPPPPGASPPPALDDLILPPNIGFQYASPPPPQEHDELPDDYKYEVEVDSHETFLNERLKKAFVALKAWKAAMYSDPYNFTENWVGNDVCLYRGVFCTTALDDSTVEVVAGIDLNHADIAGYLPPELGLLTDLALFHINSNRFCGIIPHSFSKLTLMFEFDVSNNRFVGHFPEVVFYWRIAKYLDLRFNDFEGEIPPALFTMTFDAIFLNNNRFSSFIPDTIGNSTVSVVSFAYNYFHGCIPSSVGQMSSLKQVLFIGNNLDGCLPVELGKLVNVTVLDISNNSFPGWLPTLSGLKNLQWLDVSHNEFRGSVSAEICKLPHLDNFTYSFNYFNQQDGECVTSKDSKKIFGDVHNCLPNRPEQRDAESCSSFMMKSLINLRPIRYGFVGSHLQNRANPQFHPHLLIIIIIIIMNSIITANDRISTANDRISTANDQISSADDRISSADDRIPTADDRIPTATLYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPVYSPPPPPPTASPPPPVHSPPPPVYSPPPPVHSPPPPVYSPPPPIYSPPPPVHSPPPPTASPPPPVHSPPPPTASPPPPVHSPPPPTASPPPPTASPPPPPGASPPPAFEDLILPPNIGFQYASPPPPQFPGY 1700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2640891 2654008 + Cp4.1LG17g03640.1 Cpe17g00367 483685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00367 1700 MobiDBLite consensus disorder prediction 428 443 - -
Cpe17g00367 1700 SUPERFAMILY L domain-like 83 371 - -
Cpe17g00367 1700 MobiDBLite consensus disorder prediction 983 1059 - -
Cpe17g00367 1700 MobiDBLite consensus disorder prediction 1483 1700 - -
Cpe17g00367 1700 MobiDBLite consensus disorder prediction 399 1085 - -
Cpe17g00367 1700 Pfam Leucine rich repeat N-terminal domain 82 114 IPR013210 -
Cpe17g00367 1700 Pfam Leucine rich repeat N-terminal domain 1108 1140 IPR013210 -
Cpe17g00367 1700 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 14 614 - -
Cpe17g00367 1700 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 1571 1695 - -
Cpe17g00367 1700 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 1077 1589 - -
Cpe17g00367 1700 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1571 1695 - -
Cpe17g00367 1700 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1077 1589 - -
Cpe17g00367 1700 MobiDBLite consensus disorder prediction 1504 1679 - -
Cpe17g00367 1700 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 14 614 - -
Cpe17g00367 1700 MobiDBLite consensus disorder prediction 486 560 - -
Cpe17g00367 1700 Gene3D Ribonuclease Inhibitor 1105 1394 IPR032675 -
Cpe17g00367 1700 Gene3D Ribonuclease Inhibitor 79 369 IPR032675 -
Cpe17g00367 1700 SUPERFAMILY L domain-like 1114 1377 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00897 Cpe-Chr6:6094169 Cpe17g00367 Cpe-Chr17:2640891 5.25E-09 dispersed
Cpe07g00999 Cpe-Chr7:9122216 Cpe17g00367 Cpe-Chr17:2640891 9.65E-119 dispersed
Cpe11g01106 Cpe-Chr11:9219685 Cpe17g00367 Cpe-Chr17:2640891 2.65E-120 dispersed
Cpe17g00367 Cpe-Chr17:2640891 Cpe18g00446 Cpe-Chr18:5474595 8.97E-106 dispersed
Cpe02g00154 Cpe-Chr2:794354 Cpe17g00367 Cpe-Chr17:2640891 1.31E-126 transposed
Cpe12g00384 Cpe-Chr12:2744480 Cpe17g00367 Cpe-Chr17:2640891 1.36E-170 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00367 - - cpep:111778746 1787.31