Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe17g00371 | ATGGAACCTCAATCTCAAGTGGGTAATCTTCGTTTTCGAATTTTCGATTTGGGTTTCTTGTCAATTTTGATATCATCACTTCCTCCTTTGGACCTCCGGAGTGTCAATGGAGTCCGTGCTGCTACTAATTCAGAAACAAATGAGGAGGTTGCTATTAAGAAGGTTGGCAATGCATTTGACAATAGGATTGATGCTAAAAGAACCTTGCGGGAAATCAAGCTTCTTCGTCACATGGATCATGAAAATATCATTGCTCTTAAAGATATTATAAGACCTCCTCAGAAGGAGAATTTCAATGATGTGTACCTTGTTTATGAACTGATGGATACTGATCTAAATCAGATAATACGGTCCAACCAATCGTTGACTGATGACCATTGTCGGTTCTTTCTGTACCAGTTGTTACGAGGCCTAAAATACGTACATTCCGCTAATGTTCTACATCGTGATCTGAAACCAAGCAATTTGTTCCTCAATGCAAACTGTGACCTAAAACTTGGGGACTTTGGGCTTGCAAGGACAACTTCTGAGACTGATTTTATGACTGAGTACGTTGTTACTCGGTGGTACCGTGCACCGGAATTGCTTCTTAATTGTTCGGAATACACTGGAGCAATAGATATTTGGTCTGTTGGCTGTATACTTGGTGAAATTATGCACAGAAAACCACTGTTTCCTGGAAAAGATTATGTCCATCAGCTAAAACTTATTACTGAGCTCATTGGGTCACCTGACGACTCGAGCCTCGGGTTCTTACGAAGTGACAATCCACGAAAATATTTTAAAAATATTCCTCACTTCCCGAGGCAACCGTTCTCCACTAAATTTCCTACGATGTCTCCTGCTGCTATCGACTTGCTGGAGAAGATGCTCGTCTTTGATCCTACTAAACGCATTACAGTTGATGAGGCGTTGAGGCATCCATACTTGGCACCTCTTCATGATATCAATGAGGAGCCTGTATGTCCGAGGCTTTTCAGTTTTGACTTCGAGCAACCGTCGTTTACCGAAGAAAACATCAAGGAACTTAATGGAACTAAGTGGAATTCGTCTTCAAATCTTAGCTGTATCATGAGGTGTGATGGTTCCATTTGGACCCTATCAAACGCGTTTCTTCTGAATTCTCTTCCAATGGAGTTTCTTAAGCTAATTCTCTTTACCCTGTTACTTTCTTCCTCCGCCGTTCCAATTCTTTCCTATTCTCATTTCTCTCCGGTCGATCATTACCTCGTCGACTGTGGGTCAACCCTAAAGTCCACCGTCGATCATCGCATCTTCCTCTCCGATTCATCCCCTTCAAACTCTCCTTTTCTCACCGCTCCTCACTCTTTCTCCCTCAGAAATGAACACCCCTTCGAGGGTTTGCCCCCGATTTACAGCTCGGCTCGCGTTTTCGAGGCACCGTCCAAGTACGAGTTTCAGATCAGAGATAAAGGGACGCATATGGTACGTCTCCATTTTCAAACTTTTAGTTCCTCAAATTTGGATTTGATTCGTGCTCAATTCCACGTTCTGGTTAATGGGTATGTGATTTTGAGTAATTTTAGTGGGGTCTCTGCTGTAAACCCTAGAATTAAGGAGTTCCTTATCTGGATTGGAACTGAAACCCTTGAAATTACCTTTGTCCCTGTTAAGAAATCCAATTTGGCTTTTGTTAATGCGATTGAAGTTATTTCTGCGCCTAAAGATCTTGTTGCTGATACTGCAAAATACTTGAGTTATGAACATAGTGGAGTTGTTGATGGTTTGTCCAAGCAAGGGCTTGAAGTTTTGTACAGGGTCAATGTTGGGGGCCCTAAAGTGACCCCGTTTAATGATTCTTTCTGGAGGACTTGGCTTCCTGATGATGAACACTTTGAATCCATTTGGGGATCAAAGAAAGTGTATTCTACTGGAAGAATGAAGTATCAAGCAGGTGGCGCTAGTCGTGAAGTTGGTCCTGACAATGTTTACAACTCCGCCAGAGTGATCCAAAGTACAAATTCTTCGGTTCCATATATGAACATGACATGGACATTCCCTGTAATTGATGGATACAATTACATTGTTCGCTTGCATTTTTGTGATATTGCAAGTATATCAATTGGTTTTCTGTTTTTCAATATCTATGTTAACGGGTACATGGCGTATGAGAATTTCGATCTCTCGAGCGCTACTAATTGGGAACTTTCTTCTCCATTCTATGTTGATTTCATGGTTAATGCTGGTCAAGAAGGAGTTCTTAGAATTGGTATTGGAAGCTCTAATCAGAGTGTCCCATATGCTGTAGATGGTCTACTAAATGGAATTGAGATCATGAAATTGAACAACTCTTTGGGTAGCTTTGATGGTAGCCTATCTGCAGAGATGGTTTTGAAGGGATGTCGAGGATACACCGTTAATTTAGTTCCATATGTAGTGATTTTGTGCTTGATCGTAAGCGTGTCGCTGATGTTACGTCGGAAGGTGATCGGGAGGGACGAGTCTTTCTCGTGGTCGAAACTTCCCGTGTCATCAGCAATGAGTAAACAAGATAAGAAGAAGAAACCCAAATCCCCTTGCCATTTACTCCAGAGTTTTCCTGATTCCAAACGTCCACCACCGACGGAGCTTCTAATAGTCAAATTTCAGTCCTTTCACCACCTCAATTATTTCACTGAAATCGCAACCCAAATCCCACTTGTCTCTGCTCCAACCAAAATTCCTATTTGCTCCCACCGTCACCAATTCCCATAA | 2715 | 41.92 | MEPQSQVGNLRFRIFDLGFLSILISSLPPLDLRSVNGVRAATNSETNEEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENIIALKDIIRPPQKENFNDVYLVYELMDTDLNQIIRSNQSLTDDHCRFFLYQLLRGLKYVHSANVLHRDLKPSNLFLNANCDLKLGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTGAIDIWSVGCILGEIMHRKPLFPGKDYVHQLKLITELIGSPDDSSLGFLRSDNPRKYFKNIPHFPRQPFSTKFPTMSPAAIDLLEKMLVFDPTKRITVDEALRHPYLAPLHDINEEPVCPRLFSFDFEQPSFTEENIKELNGTKWNSSSNLSCIMRCDGSIWTLSNAFLLNSLPMEFLKLILFTLLLSSSAVPILSYSHFSPVDHYLVDCGSTLKSTVDHRIFLSDSSPSNSPFLTAPHSFSLRNEHPFEGLPPIYSSARVFEAPSKYEFQIRDKGTHMVRLHFQTFSSSNLDLIRAQFHVLVNGYVILSNFSGVSAVNPRIKEFLIWIGTETLEITFVPVKKSNLAFVNAIEVISAPKDLVADTAKYLSYEHSGVVDGLSKQGLEVLYRVNVGGPKVTPFNDSFWRTWLPDDEHFESIWGSKKVYSTGRMKYQAGGASREVGPDNVYNSARVIQSTNSSVPYMNMTWTFPVIDGYNYIVRLHFCDIASISIGFLFFNIYVNGYMAYENFDLSSATNWELSSPFYVDFMVNAGQEGVLRIGIGSSNQSVPYAVDGLLNGIEIMKLNNSLGSFDGSLSAEMVLKGCRGYTVNLVPYVVILCLIVSVSLMLRRKVIGRDESFSWSKLPVSSAMSKQDKKKKPKSPCHLLQSFPDSKRPPPTELLIVKFQSFHHLNYFTEIATQIPLVSAPTKIPICSHRHQFP | 904 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 2686582 | 2698419 | - | Cp4.1LG17g03810.1 | Cpe17g00371 | 483689 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe17g00371 | 904 | PANTHER | OS03G0124300 PROTEIN | 383 | 842 | - | - | |
Cpe17g00371 | 904 | SUPERFAMILY | Protein kinase-like (PK-like) | 38 | 317 | IPR011009 | - | |
Cpe17g00371 | 904 | Pfam | Protein kinase domain | 38 | 310 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe17g00371 | 904 | PANTHER | OS03G0124300 PROTEIN-RELATED | 383 | 842 | - | - | |
Cpe17g00371 | 904 | ProSitePatterns | MAP kinase signature. | 59 | 162 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Cpe17g00371 | 904 | SMART | serkin_6 | 30 | 310 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe17g00371 | 904 | MobiDBLite | consensus disorder prediction | 834 | 856 | - | - | |
Cpe17g00371 | 904 | Gene3D | Transferase(Phosphotransferase) domain 1 | 108 | 328 | - | - | |
Cpe17g00371 | 904 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 146 | 158 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe17g00371 | 904 | ProSiteProfiles | Protein kinase domain profile. | 24 | 310 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe17g00371 | 904 | Gene3D | - | 408 | 562 | - | - | |
Cpe17g00371 | 904 | Gene3D | - | 587 | 770 | - | - | |
Cpe17g00371 | 904 | Gene3D | Phosphorylase Kinase; domain 1 | 37 | 329 | - | - | |
Cpe17g00371 | 904 | Pfam | Malectin-like domain | 411 | 767 | IPR024788 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe17g00371 | Cpe-Chr17:2686582 | Cpe20g00780 | Cpe-Chr20:6989381 | 1.63E-160 | dispersed | |
Cpe17g00606 | Cpe-Chr17:5017980 | Cpe17g00371 | Cpe-Chr17:2686582 | 4.80E-68 | dispersed | |
Cpe12g00387 | Cpe-Chr12:2759463 | Cpe17g00371 | Cpe-Chr17:2686582 | 0 | wgd | |
Cpe14g00089 | Cpe-Chr14:483688 | Cpe17g00371 | Cpe-Chr17:2686582 | 3.91E-88 | wgd | |
Cpe17g00371 | Cpe-Chr17:2686582 | Cpe09g00072 | Cpe-Chr9:423972 | 3.60E-69 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62942 | PF12819 | Malectin_like | 5.30E-30 | CL0202 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe17g00371 | K20600 | - | cmax:111494456 | 901.353 |