Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00371 ATGGAACCTCAATCTCAAGTGGGTAATCTTCGTTTTCGAATTTTCGATTTGGGTTTCTTGTCAATTTTGATATCATCACTTCCTCCTTTGGACCTCCGGAGTGTCAATGGAGTCCGTGCTGCTACTAATTCAGAAACAAATGAGGAGGTTGCTATTAAGAAGGTTGGCAATGCATTTGACAATAGGATTGATGCTAAAAGAACCTTGCGGGAAATCAAGCTTCTTCGTCACATGGATCATGAAAATATCATTGCTCTTAAAGATATTATAAGACCTCCTCAGAAGGAGAATTTCAATGATGTGTACCTTGTTTATGAACTGATGGATACTGATCTAAATCAGATAATACGGTCCAACCAATCGTTGACTGATGACCATTGTCGGTTCTTTCTGTACCAGTTGTTACGAGGCCTAAAATACGTACATTCCGCTAATGTTCTACATCGTGATCTGAAACCAAGCAATTTGTTCCTCAATGCAAACTGTGACCTAAAACTTGGGGACTTTGGGCTTGCAAGGACAACTTCTGAGACTGATTTTATGACTGAGTACGTTGTTACTCGGTGGTACCGTGCACCGGAATTGCTTCTTAATTGTTCGGAATACACTGGAGCAATAGATATTTGGTCTGTTGGCTGTATACTTGGTGAAATTATGCACAGAAAACCACTGTTTCCTGGAAAAGATTATGTCCATCAGCTAAAACTTATTACTGAGCTCATTGGGTCACCTGACGACTCGAGCCTCGGGTTCTTACGAAGTGACAATCCACGAAAATATTTTAAAAATATTCCTCACTTCCCGAGGCAACCGTTCTCCACTAAATTTCCTACGATGTCTCCTGCTGCTATCGACTTGCTGGAGAAGATGCTCGTCTTTGATCCTACTAAACGCATTACAGTTGATGAGGCGTTGAGGCATCCATACTTGGCACCTCTTCATGATATCAATGAGGAGCCTGTATGTCCGAGGCTTTTCAGTTTTGACTTCGAGCAACCGTCGTTTACCGAAGAAAACATCAAGGAACTTAATGGAACTAAGTGGAATTCGTCTTCAAATCTTAGCTGTATCATGAGGTGTGATGGTTCCATTTGGACCCTATCAAACGCGTTTCTTCTGAATTCTCTTCCAATGGAGTTTCTTAAGCTAATTCTCTTTACCCTGTTACTTTCTTCCTCCGCCGTTCCAATTCTTTCCTATTCTCATTTCTCTCCGGTCGATCATTACCTCGTCGACTGTGGGTCAACCCTAAAGTCCACCGTCGATCATCGCATCTTCCTCTCCGATTCATCCCCTTCAAACTCTCCTTTTCTCACCGCTCCTCACTCTTTCTCCCTCAGAAATGAACACCCCTTCGAGGGTTTGCCCCCGATTTACAGCTCGGCTCGCGTTTTCGAGGCACCGTCCAAGTACGAGTTTCAGATCAGAGATAAAGGGACGCATATGGTACGTCTCCATTTTCAAACTTTTAGTTCCTCAAATTTGGATTTGATTCGTGCTCAATTCCACGTTCTGGTTAATGGGTATGTGATTTTGAGTAATTTTAGTGGGGTCTCTGCTGTAAACCCTAGAATTAAGGAGTTCCTTATCTGGATTGGAACTGAAACCCTTGAAATTACCTTTGTCCCTGTTAAGAAATCCAATTTGGCTTTTGTTAATGCGATTGAAGTTATTTCTGCGCCTAAAGATCTTGTTGCTGATACTGCAAAATACTTGAGTTATGAACATAGTGGAGTTGTTGATGGTTTGTCCAAGCAAGGGCTTGAAGTTTTGTACAGGGTCAATGTTGGGGGCCCTAAAGTGACCCCGTTTAATGATTCTTTCTGGAGGACTTGGCTTCCTGATGATGAACACTTTGAATCCATTTGGGGATCAAAGAAAGTGTATTCTACTGGAAGAATGAAGTATCAAGCAGGTGGCGCTAGTCGTGAAGTTGGTCCTGACAATGTTTACAACTCCGCCAGAGTGATCCAAAGTACAAATTCTTCGGTTCCATATATGAACATGACATGGACATTCCCTGTAATTGATGGATACAATTACATTGTTCGCTTGCATTTTTGTGATATTGCAAGTATATCAATTGGTTTTCTGTTTTTCAATATCTATGTTAACGGGTACATGGCGTATGAGAATTTCGATCTCTCGAGCGCTACTAATTGGGAACTTTCTTCTCCATTCTATGTTGATTTCATGGTTAATGCTGGTCAAGAAGGAGTTCTTAGAATTGGTATTGGAAGCTCTAATCAGAGTGTCCCATATGCTGTAGATGGTCTACTAAATGGAATTGAGATCATGAAATTGAACAACTCTTTGGGTAGCTTTGATGGTAGCCTATCTGCAGAGATGGTTTTGAAGGGATGTCGAGGATACACCGTTAATTTAGTTCCATATGTAGTGATTTTGTGCTTGATCGTAAGCGTGTCGCTGATGTTACGTCGGAAGGTGATCGGGAGGGACGAGTCTTTCTCGTGGTCGAAACTTCCCGTGTCATCAGCAATGAGTAAACAAGATAAGAAGAAGAAACCCAAATCCCCTTGCCATTTACTCCAGAGTTTTCCTGATTCCAAACGTCCACCACCGACGGAGCTTCTAATAGTCAAATTTCAGTCCTTTCACCACCTCAATTATTTCACTGAAATCGCAACCCAAATCCCACTTGTCTCTGCTCCAACCAAAATTCCTATTTGCTCCCACCGTCACCAATTCCCATAA 2715 41.92 MEPQSQVGNLRFRIFDLGFLSILISSLPPLDLRSVNGVRAATNSETNEEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENIIALKDIIRPPQKENFNDVYLVYELMDTDLNQIIRSNQSLTDDHCRFFLYQLLRGLKYVHSANVLHRDLKPSNLFLNANCDLKLGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTGAIDIWSVGCILGEIMHRKPLFPGKDYVHQLKLITELIGSPDDSSLGFLRSDNPRKYFKNIPHFPRQPFSTKFPTMSPAAIDLLEKMLVFDPTKRITVDEALRHPYLAPLHDINEEPVCPRLFSFDFEQPSFTEENIKELNGTKWNSSSNLSCIMRCDGSIWTLSNAFLLNSLPMEFLKLILFTLLLSSSAVPILSYSHFSPVDHYLVDCGSTLKSTVDHRIFLSDSSPSNSPFLTAPHSFSLRNEHPFEGLPPIYSSARVFEAPSKYEFQIRDKGTHMVRLHFQTFSSSNLDLIRAQFHVLVNGYVILSNFSGVSAVNPRIKEFLIWIGTETLEITFVPVKKSNLAFVNAIEVISAPKDLVADTAKYLSYEHSGVVDGLSKQGLEVLYRVNVGGPKVTPFNDSFWRTWLPDDEHFESIWGSKKVYSTGRMKYQAGGASREVGPDNVYNSARVIQSTNSSVPYMNMTWTFPVIDGYNYIVRLHFCDIASISIGFLFFNIYVNGYMAYENFDLSSATNWELSSPFYVDFMVNAGQEGVLRIGIGSSNQSVPYAVDGLLNGIEIMKLNNSLGSFDGSLSAEMVLKGCRGYTVNLVPYVVILCLIVSVSLMLRRKVIGRDESFSWSKLPVSSAMSKQDKKKKPKSPCHLLQSFPDSKRPPPTELLIVKFQSFHHLNYFTEIATQIPLVSAPTKIPICSHRHQFP 904
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2686582 2698419 - Cp4.1LG17g03810.1 Cpe17g00371 483689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00371 904 PANTHER OS03G0124300 PROTEIN 383 842 - -
Cpe17g00371 904 SUPERFAMILY Protein kinase-like (PK-like) 38 317 IPR011009 -
Cpe17g00371 904 Pfam Protein kinase domain 38 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe17g00371 904 PANTHER OS03G0124300 PROTEIN-RELATED 383 842 - -
Cpe17g00371 904 ProSitePatterns MAP kinase signature. 59 162 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cpe17g00371 904 SMART serkin_6 30 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe17g00371 904 MobiDBLite consensus disorder prediction 834 856 - -
Cpe17g00371 904 Gene3D Transferase(Phosphotransferase) domain 1 108 328 - -
Cpe17g00371 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Cpe17g00371 904 ProSiteProfiles Protein kinase domain profile. 24 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe17g00371 904 Gene3D - 408 562 - -
Cpe17g00371 904 Gene3D - 587 770 - -
Cpe17g00371 904 Gene3D Phosphorylase Kinase; domain 1 37 329 - -
Cpe17g00371 904 Pfam Malectin-like domain 411 767 IPR024788 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe17g00371 Cpe-Chr17:2686582 Cpe20g00780 Cpe-Chr20:6989381 1.63E-160 dispersed
Cpe17g00606 Cpe-Chr17:5017980 Cpe17g00371 Cpe-Chr17:2686582 4.80E-68 dispersed
Cpe12g00387 Cpe-Chr12:2759463 Cpe17g00371 Cpe-Chr17:2686582 0 wgd
Cpe14g00089 Cpe-Chr14:483688 Cpe17g00371 Cpe-Chr17:2686582 3.91E-88 wgd
Cpe17g00371 Cpe-Chr17:2686582 Cpe09g00072 Cpe-Chr9:423972 3.60E-69 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62942 PF12819 Malectin_like 5.30E-30 CL0202 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00371 K20600 - cmax:111494456 901.353