Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00404 ATGTCCCTCTGGGTCTTCGCTTTGGCTTCTAAATGCTCGCCTCTCACCCAACCCAACGTCCTCTACTCCTTCCTCTTCCTATTCCTTATTTGGTTTCTTGTTTGCATTTTCCATTGGGCCCATCCTGGCGGCCCTGCTTGGGGCCGCCACCCACGGTGCCGCCGCAATTCCCCTCTCTCCACCACCACCATCCCTGGCCCAAGAGGCCTCCCCGTCATCGGGAGCATGACCCTCATGACTGGACTGGCCCACCACCGAATAGCTGCCATGGCCAAATCCCTAGGTGCCACAAGACTCATGGCCTTCTCACTCGCCAACACTCGCGTGATTGTCACGTGTAACCCGGATGTGGCTAAAGAAATCCTCAACAGCTCGGTCTTTGTGGACCGTCCGATTAAGGAATCTGCTTACTCCTTGATGTTCAATCGCGCCATTGGATTTGCCCCTTATGACGTCTATTGGCGGACACTCCGACGTATTGCTTCACAACATCTCTTCTGTCCTAAACAAATTAAATCCTCCGAATTCCAACGCCGCCAAATCGCTTCCCAAATGGTCGCAATCTTCGCTAACAACAACAACAACAACCACACCTCCTCTCATCACCAAGTTCGTGACACGCTCAAGCGAGCCTCTTTGAACCACATGATGGGCTCAGTCTTCGGCCAGGCTTACAATCTCTCAGACTCAAATAATCAAATCGAGCAGCTCAAGAGCCTCGTCGACGAAGGTTACGATTTATTGGGCCTTCTCAACTGGTCCGACCATCTCCCCTTTTTGGCTGATCTCGACCCACAGAGAATCCGGTTCAGATGCTCCCGGTTGGTCCCTAAAGTGAACCGGTTTCTAAACCGGATCATCGCGGATCACCGGTCCAAATCAACCCAACAAATCATGGATTTTGTCGACGTTCTTCTCTCTCTTCAACAAACCGAAAATCTCTCTGATTCCGATATCATCGCCGTTCTTTGGGAAATGATATTTAGAGGGACGGACACGGTGGCTGTGTTGATAGAATGGACCCTAGCGAGGATGGTGGTTCATAAGGAGGAGCAAGAGAAAGTACAAGAGGAATTAGATAAAGTGGTTGGTAGATCACGCGCCGTCGTGGAATCCGACATTCCGTCGTTGGAATATCTAACGGCGGTGGTTAAGGAAGCACTCGCGTGGACTACTGTAACCTTTTGGGTAGCTACTCTGTTGCATGAGTTTAAATGGTGGCAAAACGACGACGTTGACTTGTGTGAGAAACTCAAGCTGTCTTGTGAGATGGCGAATCCACTGACGGTTAAAGTATCCCGACGG 1305 50.8 MSLWVFALASKCSPLTQPNVLYSFLFLFLIWFLVCIFHWAHPGGPAWGRHPRCRRNSPLSTTTIPGPRGLPVIGSMTLMTGLAHHRIAAMAKSLGATRLMAFSLANTRVIVTCNPDVAKEILNSSVFVDRPIKESAYSLMFNRAIGFAPYDVYWRTLRRIASQHLFCPKQIKSSEFQRRQIASQMVAIFANNNNNNHTSSHHQVRDTLKRASLNHMMGSVFGQAYNLSDSNNQIEQLKSLVDEGYDLLGLLNWSDHLPFLADLDPQRIRFRCSRLVPKVNRFLNRIIADHRSKSTQQIMDFVDVLLSLQQTENLSDSDIIAVLWEMIFRGTDTVAVLIEWTLARMVVHKEEQEKVQEELDKVVGRSRAVVESDIPSLEYLTAVVKEALAWTTVTFWVATLLHEFKWWQNDDVDLCEKLKLSCEMANPLTVKVSRR 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 3008182 3009854 - Cp4.1LG17g04440.1 Cpe17g00404 483722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00404 435 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe17g00404 435 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe17g00404 435 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe17g00404 435 PRINTS E-class P450 group I signature 383 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe17g00404 435 PANTHER CYTOCHROME P450 78A7-RELATED 2 388 - -
Cpe17g00404 435 PANTHER CYTOCHROME P450 78A6 387 435 - -
Cpe17g00404 435 Pfam Cytochrome P450 65 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe17g00404 435 PANTHER CYTOCHROME P450 78A6 2 388 - -
Cpe17g00404 435 PANTHER CYTOCHROME P450 78A7-RELATED 387 435 - -
Cpe17g00404 435 SUPERFAMILY Cytochrome P450 64 435 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe17g00404 435 Gene3D Cytochrome P450 51 403 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe17g00404 Cpe-Chr17:3008182 Cpe20g00084 Cpe-Chr20:447622 1.48E-109 dispersed
Cpe12g00430 Cpe-Chr12:3286711 Cpe17g00404 Cpe-Chr17:3008182 4.56E-16 wgd
Cpe17g00404 Cpe-Chr17:3008182 Cpe03g01791 Cpe-Chr3:13468487 6.68E-42 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00404 K20619 - csv:101216159 577.785