Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe17g00412 | ATGACGTCTCGTGGTTCATCGGCTTCGGGCAATGGCCTATTTCCGCTCAACGCTTCCACGTCCGGCCGGCAAGACGATGTTGAGGCTGGGCTCTCCTCCGGCAAAAGCATTAACAAGGAGGAGGAAGAAGAGGTTTCCGATCCTTTTGATGTCGACAATACCAAAAACGTCCCGCTCGAGATACTCAAGCGATGGAGGCAAGCTGCGTTGGTGCTTAATGCATCTCGGAGATTTCGATATACTTTGGATTTAAAAAAGGAGGAAGAGAAAGAGAAAAGAAGAAGGATGATTAGAGCCCACTCTCAAGTTATAAGGGCAGCACTGCTTTTCAAATTGGCAGGGGAACAACAAACTGGTTTCTCAGTACCACCTCCAACGTCAACTGGTGACTATGGCATTAATTTAGAACATCTTGTCTCACTGACCCGTGAACAAAACTTTTCTTCTCTACAACAATATGGAGGAGTCAAAGGCTTATCAAATTTATTGAAAACAAATACCGATAAAGGAATACCGGGGGATGAAACTGATTTACTAAAAAGAAGAAATACCTTTGGATCAAATACATATCCACGTAAAAAAGGACGGAGTTTCTTGAGATTTCTTTGGGAAGCCTGGCAAGATTTAACCCTAATCATCTTGATTATAGCTGCAGTGGCATCATTAGCTTTGGGAATGAAAACAAAGGGTGTAAAGGAAGGATGGTATGACGGAGGAAGCATTTCCTTTGCTGTGTTTCTTGTCATAATGGTCACAGCGGTCAGTGATTATCGACAGTCTCTTCAGTTTCAAAACTTAAATGAGGAAAAACAGAACATACAAGTAGAGATCTTGAGGGATGGTAGAACTTTAAAGGTCTCAATATTTGATATCGTTGTTGGAGATGTTGTACCTCTTAAAATTGGAGATCAGATCCCTGCTGATGGAATATTAATCACCGGTCATTCACTTGCCATAGATGAATCTAGCATGACTGGCGAAAGCAAGATTGTAACTGCTGTTGGAATCAATACTGAATGGGGATTGTTGATGGCCAGTATCTCAGAGGATACTGGGGAAGAAACTCCCTTGCAGGTCCGGTTGAACGGAGTTGCAACTTTCATAGGCATAGTTGGGCTTGCGGTTGCAGTCTCTGTGCTAGCTATCCTTTTGGGCAGATACTTCACTGGAAATACACATGATGCAAATGGAAACATTGAATTTCAGCGTGGGCATACGAGTCTAGGTGATGCTGTAAATGGAGTAATTAGAATCGTTACTGTTGCTGTTACTATTGTGGTTGTTGCAGTGCCTGAAGGACTTCCTTTGGCTGTCACTCTAACATTAGCGTACTCCATGCGGAAAATGATGGCCGATAAAGCATTGGTTCGTAGACTGTCTGCTTGCGAAACTATGGGTTCTGCAACAACAATTTGCAGTGATAAGACTGGAACGTTGACTTTAAATCAGCCNGTGGTCGAGGCATGTGTTGGCAAGAAAATGATGAATCCCCCAGATGAGCCACTGGAGTTGCAGTCACTGGTTCTCAATCTGCTATATGAGGGCATTGCTCAGAACAGCGCAGGCAATGTTTTTGTTGCTATGGATGGGAGAAGTATAGAGGTCACTGGATCTCCTACAGAAAAGGCTATTTTATCTTGGGCTGTCAAGCTGGGAATGAAGTATGATGTTGTCAAATCAGAGTCTGAAGTTCTTCATGTTGTCCCGTTCAATTCAGAAAAGAAGCGAGGAGGTGTTGCGATAAAGCGGGCTGACTCAGAAGTCTACATACACTGGAAAGGAGCGGCAGAGATGGTCTTATCTTCTTGTACAAAGTATATGGGAATGAATTGTGAAGTGCACTCAATGGAAGGCAATGAGGATTATTTTAAGGCAGCTATTAATGATATGGCTGCAAGAAGTTTGCGTTGTGTTGCGATTGCATATAGACCATATGAATTAGAGAAGGTTCCAGTAGATGAACAGGGTTTGGATCAATGGGAATTGCCTGCTGATGATCTTATTCTGCTTGCAATTGTTGGTATAAAGGATCCTTGTCGTGCTGGTGTTAAAGAGGCTGTGAAAGTGTGCACGGATGCTGGCGTCAAGGTGCGCATGGTAACTGGAGACAATATACAGACCGCCAAAGCTATAGCAATAGAGTGTGGAATACTTAGCGCAACAGACGATGCTTCTGAGCCGACAGTAATTGAAGGAAAAGAATTCCGTGTATTGTCTGAGAAGGAAAGAGAACAAGTTGCCCCAAAAATAACGGTGATGGGGAGGTCTTCACCCAATGACAAGCTCTTGCTTGTTCAAGCATTAAGAAAGGGAGGAGACGTCGTTGCTGTAACAGGCGATGGGACAAATGATGCCCCTGCACTCCACGAGGCAGATATCGGTCTTTCTATGGGCATACAAGGCACTGAAGTTGCGAAAGAAAGTTCTGATATTGTTATCTTGGATGATAACTTTGCTTCAGTTGTAAAGGTTGTCCGGTGGGGGCGTTCTGTGTATGCAAACATTCAGAAGTTCATCCAGTTTCAGCTCACTGTAAATGTTGCCGCTCTTGTGATTAATGTTGTTGCCGCTGTGTCTTCCGGTGATGTTCCTTTAAATACTGTGCAGCTTCTCTGGGTTAACCTGATCATGGACACACTCGGTGCTCTAGCATTAGCTACTGAACCACCAACGGACCACTTGATGCATCGGTCACCTGTTGGTCGAAGGAATTTGATTGTACAGGCTTTGTATCAAGTTGCTGTCCTTCTTGTTCTCAACTTCTATGCCACTGATATTCTTCAATTGAATACTGATAGCAAGGAGCACGCCTTTAATGTGAAGAATACAGTGATTTTCAATGCCTTTGTCCTCTGCCAAATATTCAATGAATTTAACGCTCGAAAACCAGATGAAATGAACGTATTCAGTGGCGTGACGAAAAATTACCTCTTTATGGGAATAGTTGGAACAACGTTCTTGCTTCAGATTATCATCGTCGAATTTCTAGGAAAATTTACTTCCACAGTAAAACTTGATGGGAAGCAATGGCTTATCTGCATTGCTATCGGCCTTGTGAGCTGGCCTCTGGCTGTCGTCGGCAAACTGATTCCAGTTCCTGAGACTCCATTGGGTAAATACTTCACAAAGCTAGTTCAACGGTACAGGAGGTCACATGGTGCTTAA | 3165 | 43.44 | MTSRGSSASGNGLFPLNASTSGRQDDVEAGLSSGKSINKEEEEEVSDPFDVDNTKNVPLEILKRWRQAALVLNASRRFRYTLDLKKEEEKEKRRRMIRAHSQVIRAALLFKLAGEQQTGFSVPPPTSTGDYGINLEHLVSLTREQNFSSLQQYGGVKGLSNLLKTNTDKGIPGDETDLLKRRNTFGSNTYPRKKGRSFLRFLWEAWQDLTLIILIIAAVASLALGMKTKGVKEGWYDGGSISFAVFLVIMVTAVSDYRQSLQFQNLNEEKQNIQVEILRDGRTLKVSIFDIVVGDVVPLKIGDQIPADGILITGHSLAIDESSMTGESKIVTAVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLAVAVSVLAILLGRYFTGNTHDANGNIEFQRGHTSLGDAVNGVIRIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQPVVEACVGKKMMNPPDEPLELQSLVLNLLYEGIAQNSAGNVFVAMDGRSIEVTGSPTEKAILSWAVKLGMKYDVVKSESEVLHVVPFNSEKKRGGVAIKRADSEVYIHWKGAAEMVLSSCTKYMGMNCEVHSMEGNEDYFKAAINDMAARSLRCVAIAYRPYELEKVPVDEQGLDQWELPADDLILLAIVGIKDPCRAGVKEAVKVCTDAGVKVRMVTGDNIQTAKAIAIECGILSATDDASEPTVIEGKEFRVLSEKEREQVAPKITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRRNLIVQALYQVAVLLVLNFYATDILQLNTDSKEHAFNVKNTVIFNAFVLCQIFNEFNARKPDEMNVFSGVTKNYLFMGIVGTTFLLQIIIVEFLGKFTSTVKLDGKQWLICIAIGLVSWPLAVVGKLIPVPETPLGKYFTKLVQRYRRSHGA | 1054 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 3084095 | 3100346 | + | Cp4.1LG17g04530.1 | Cpe17g00412 | 483730 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe17g00412 | 1054 | SUPERFAMILY | HAD-like | 470 | 883 | IPR036412 | - | |
Cpe17g00412 | 1054 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 332 | 1046 | - | - | |
Cpe17g00412 | 1054 | Pfam | E1-E2 ATPase | 272 | 331 | - | - | |
Cpe17g00412 | 1054 | Pfam | E1-E2 ATPase | 330 | 450 | - | - | |
Cpe17g00412 | 1054 | SMART | Cation_ATPase_N_a_2 | 152 | 226 | IPR004014 | - | |
Cpe17g00412 | 1054 | PRINTS | P-type cation-transporting ATPase superfamily signature | 802 | 814 | - | - | |
Cpe17g00412 | 1054 | PRINTS | P-type cation-transporting ATPase superfamily signature | 778 | 797 | - | - | |
Cpe17g00412 | 1054 | PRINTS | P-type cation-transporting ATPase superfamily signature | 472 | 486 | - | - | |
Cpe17g00412 | 1054 | PRINTS | P-type cation-transporting ATPase superfamily signature | 671 | 682 | - | - | |
Cpe17g00412 | 1054 | PRINTS | P-type cation-transporting ATPase superfamily signature | 320 | 334 | - | - | |
Cpe17g00412 | 1054 | PRINTS | P-type cation-transporting ATPase superfamily signature | 693 | 703 | - | - | |
Cpe17g00412 | 1054 | Pfam | Cation transporter/ATPase, N-terminus | 154 | 221 | IPR004014 | - | |
Cpe17g00412 | 1054 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 412 | 493 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe17g00412 | 1054 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 745 | 858 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe17g00412 | 1054 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 153 | 1032 | IPR023298 | - | |
Cpe17g00412 | 1054 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 47 | 89 | IPR024750 | GO:0005516 | |
Cpe17g00412 | 1054 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
Cpe17g00412 | 1054 | SFLD | C1.7: P-type atpase like | 454 | 830 | - | - | |
Cpe17g00412 | 1054 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Cpe17g00412 | 1054 | Pfam | haloacid dehalogenase-like hydrolase | 469 | 792 | - | - | |
Cpe17g00412 | 1054 | Gene3D | - | 349 | 1022 | - | - | |
Cpe17g00412 | 1054 | SFLD | p-type atpase | 454 | 830 | IPR044492 | - | |
Cpe17g00412 | 1054 | SUPERFAMILY | Calcium ATPase, transduction domain A | 273 | 335 | IPR008250 | - | |
Cpe17g00412 | 1054 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 330 | 1032 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
Cpe17g00412 | 1054 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 474 | 480 | IPR018303 | - | |
Cpe17g00412 | 1054 | Gene3D | - | 204 | 259 | - | - | |
Cpe17g00412 | 1054 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 479 | 675 | IPR023299 | GO:0000166 | |
Cpe17g00412 | 1054 | Gene3D | - | 59 | 112 | - | - | |
Cpe17g00412 | 1054 | PANTHER | CATION TRANSPORTING ATPASE | 332 | 1046 | - | - | |
Cpe17g00412 | 1054 | PANTHER | CATION TRANSPORTING ATPASE | 35 | 332 | - | - | |
Cpe17g00412 | 1054 | Gene3D | - | 482 | 678 | IPR023299 | GO:0000166 | |
Cpe17g00412 | 1054 | Gene3D | - | 331 | 348 | - | - | |
Cpe17g00412 | 1054 | Pfam | Cation transporting ATPase, C-terminus | 863 | 1030 | IPR006068 | - | |
Cpe17g00412 | 1054 | Gene3D | - | 177 | 330 | - | - | |
Cpe17g00412 | 1054 | Gene3D | - | 469 | 823 | IPR023214 | - | |
Cpe17g00412 | 1054 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 35 | 332 | - | - | |
Cpe17g00412 | 1054 | PRINTS | Sodium/potassium-transporting ATPase signature | 239 | 259 | - | - | |
Cpe17g00412 | 1054 | PRINTS | Sodium/potassium-transporting ATPase signature | 590 | 608 | - | - | |
Cpe17g00412 | 1054 | PRINTS | Sodium/potassium-transporting ATPase signature | 850 | 871 | - | - | |
Cpe17g00412 | 1054 | PRINTS | Sodium/potassium-transporting ATPase signature | 465 | 486 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g00645 | Cpe-Chr11:4243340 | Cpe17g00412 | Cpe-Chr17:3084095 | 0 | dispersed | |
Cpe17g00412 | Cpe-Chr17:3084095 | Cpe17g00875 | Cpe-Chr17:6800597 | 0 | dispersed | |
Cpe17g00412 | Cpe-Chr17:3084095 | Cpe07g00763 | Cpe-Chr7:6709252 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe17g00412 | K01537 | - | csv:101214801 | 1756.5 |