Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00420 ATGGGGGAAAACTGGGTGATTGATTTGAGGCGCTCATATGATTCCTGTTCTGCGCAGAGAGGGAGGACGATGGGTTTAGGGAGTAGAGAGAAGACAATGAATTGGAGGTGGATGGAGATGGTTTCTCTCATCGTTCTTTGCATTCTGGGGTTGAAGCTTACCTCCATTGAAGCTGCCACAGATCCATCAGATGCCTCTGCTTTAAGAGTTTTGTATACCAGCTTGAACTCGCCCCCTCAGTTAACCCAGTGGAATGCTAATGGCGATGATCCATGTGGACAATCATGGAAAGGGATTACTTGCTCTGGCACACGGGTTACAGAAATAAACTTGTCTGGCCTCGCTCTCAGTGGATCGATGGGATACCAACTTGCAAGTTTGACATCGTTAACCAACCTAGATATGAGCAATAACAATATTGGAGGCAATATAGTCTACCAACTTCCACCATTCCTGCAGAGACTAAATCTTGCTCAAAACAGCTTCACTGAAGGCATCCCTTATTCCATTTCACAGATGACAACTCTTCGATACCTAAATCTCAGTCATAATCAGCTTCAGAATCCATTGATTGATATGTATGGGCAGCTTACTTCCCTATCCACATTGGATCTGTCTTTCAATGCTATGTCAGGCGAACTGCCTCAGAGTTTTAGCTCGCTTTCGAGCATCAGCACTATGAATTTGCAAAACAATCAGTTCACTGGCACAATTAATGTCCTCGGAAATCTTCCTCTGGATAACCTGAACGTTGAAAACAACCGTTTCTCTGGCTGGATCCCTGAGCAACTGAAAAGCATCAATCTTCAGACAAATGGCAACTCCTGGAACTCAGGTCCTGCACCCCCTCCTCCTCCTGGTACACCTCCGGCAACTAGAAGGAACCGAAATCACGATTCTGGTGGCAATAGTCCATCAAATGGTGGTTCTGGTGAAGGTCAGAAATCAGGAATTAGTGGTGGTGCCATTGCAGGAATTATCATCTCTGTGCTCGTCGTTGGAGCTGTAGTAGCATTCTTCATTGTTAGGAAGAGATCCAGGAGATCATCATCTGCAGACATTGAAAAGCTCGACAATCAACCCCCGCAACCTCGTCAAATGACTCCAGCACAAGAAATAAAGTCCGAAGAAACTTCCTCCACATTTTATCCAACATCATTTGATACTTCTGCTGCAATTAATCTCAAACCCCCTCCTAGTGATCGTCATAAATCACTTGATGAAGACGACTTTGCTAAAAGAGCTGTTGTCAAGAAGGCTAGTGCAGCTCCTATTAATGTAAAGTCATATTCGATAGCAGACCTGCAATTGGCTACTGGTAGCTTCAATTTTGAAAATCTTCTTGGTGAGGGATCGTTTGGACGTGTTTATCGGGCTGAGTTTGATGATGGGAAGATTCTTGCCGTGAAAAAAATCAATTCGGCTGTACTACCTGGGGATTTATCTGAAGATTTCACCGACATTGTTTCGAAAGTCTCCGAGTTACACCATCCCAATATAACCGAGCTCGTGGGTTATTGCTCTGAGCATGGGCAGCATTTGCTTGTGTATGAGTTCCATAAAAATGGCTCGCTTTATGATTTCTTGCATCATTCAGACGAATACAACCAGCCACTGATATGGAATAGTCGTGTTAAGATTGCTTTGGGAACAGCCCGTGCACTAGAGTATCTTCATGAAGTTTGCTCCCCATCAATTGTTCATAGAAACATCAAGTCAGCTAACATACTGCTGGATGCGGAACTCAGCCCCCACCTCTCTGATTCTGGACTGGAAAGCTTTGTACCAAATGCAGATCAGGCACTGGATCACAATGCAAGTTCAGGATACACTGCCCCCGAGGTCACGATGTCTGGCCTTTATACGCTGAAAAGCGATGTCTACAGCTTTGGAGTAGTCATGTTGGAACTGTTGACTGGGCGCAAACCATTCGACAGTTCAAGACCAAGGACCGAGCAATCCTTGGTTCGATGGGCTACACCCCAGCTTCATGACATTAATGCGTTGACCAAGATGGTGGATCCAGAACTCCAAGGACTATATCCAGTTAAATCTCTCTCCCGATTTGCAGATGTGATTGCACTTTGCGTCCAGACCGAACCAGAGTTCAGACCTCCAATGTCGGAAGTGGTGGAAGCATTGGTTCGACTTGTCCAGCGAGCTAACATGAGTAAGAGAACATATGGAAATGATAACGCAGCAGCGTCTCCCAGAGGAGGGGGGAACATGGGTGGGGAGGATACACCATAA 2250 45.47 MGENWVIDLRRSYDSCSAQRGRTMGLGSREKTMNWRWMEMVSLIVLCILGLKLTSIEAATDPSDASALRVLYTSLNSPPQLTQWNANGDDPCGQSWKGITCSGTRVTEINLSGLALSGSMGYQLASLTSLTNLDMSNNNIGGNIVYQLPPFLQRLNLAQNSFTEGIPYSISQMTTLRYLNLSHNQLQNPLIDMYGQLTSLSTLDLSFNAMSGELPQSFSSLSSISTMNLQNNQFTGTINVLGNLPLDNLNVENNRFSGWIPEQLKSINLQTNGNSWNSGPAPPPPPGTPPATRRNRNHDSGGNSPSNGGSGEGQKSGISGGAIAGIIISVLVVGAVVAFFIVRKRSRRSSSADIEKLDNQPPQPRQMTPAQEIKSEETSSTFYPTSFDTSAAINLKPPPSDRHKSLDEDDFAKRAVVKKASAAPINVKSYSIADLQLATGSFNFENLLGEGSFGRVYRAEFDDGKILAVKKINSAVLPGDLSEDFTDIVSKVSELHHPNITELVGYCSEHGQHLLVYEFHKNGSLYDFLHHSDEYNQPLIWNSRVKIALGTARALEYLHEVCSPSIVHRNIKSANILLDAELSPHLSDSGLESFVPNADQALDHNASSGYTAPEVTMSGLYTLKSDVYSFGVVMLELLTGRKPFDSSRPRTEQSLVRWATPQLHDINALTKMVDPELQGLYPVKSLSRFADVIALCVQTEPEFRPPMSEVVEALVRLVQRANMSKRTYGNDNAAASPRGGGNMGGEDTP 749
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 3144363 3149215 + Cp4.1LG17g04370.1 Cpe17g00420 483738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00420 749 MobiDBLite consensus disorder prediction 270 316 - -
Cpe17g00420 749 MobiDBLite consensus disorder prediction 728 749 - -
Cpe17g00420 749 Gene3D Phosphorylase Kinase; domain 1 404 519 - -
Cpe17g00420 749 Pfam Leucine Rich repeat 127 145 IPR001611 GO:0005515
Cpe17g00420 749 Pfam Leucine Rich repeat 173 188 IPR001611 GO:0005515
Cpe17g00420 749 PANTHER OS01G0253100 PROTEIN 51 735 IPR045271 GO:0004714|GO:0006468
Cpe17g00420 749 MobiDBLite consensus disorder prediction 293 314 - -
Cpe17g00420 749 SUPERFAMILY L domain-like 60 266 - -
Cpe17g00420 749 CDD STKc_IRAK 448 717 - -
Cpe17g00420 749 MobiDBLite consensus disorder prediction 355 380 - -
Cpe17g00420 749 ProSitePatterns Protein kinases ATP-binding region signature. 448 471 IPR017441 GO:0005524
Cpe17g00420 749 ProSiteProfiles Protein kinase domain profile. 442 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe17g00420 749 Gene3D Ribonuclease Inhibitor 61 285 IPR032675 -
Cpe17g00420 749 SUPERFAMILY Protein kinase-like (PK-like) 425 714 IPR011009 -
Cpe17g00420 749 Pfam Leucine rich repeat N-terminal domain 62 102 IPR013210 -
Cpe17g00420 749 Gene3D Transferase(Phosphotransferase) domain 1 521 737 - -
Cpe17g00420 749 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 51 735 - -
Cpe17g00420 749 MobiDBLite consensus disorder prediction 350 380 - -
Cpe17g00420 749 Pfam Protein tyrosine and serine/threonine kinase 443 714 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01752 Cpe17g00420 CCT
Cpe12g00545 Cpe17g00420 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00968 Cpe-Chr2:8570055 Cpe17g00420 Cpe-Chr17:3144363 1.61E-156 dispersed
Cpe02g01752 Cpe-Chr2:14286057 Cpe17g00420 Cpe-Chr17:3144363 0 dispersed
Cpe17g00420 Cpe-Chr17:3144363 Cpe20g00626 Cpe-Chr20:3917624 0 dispersed
Cpe13g00020 Cpe-Chr13:181595 Cpe17g00420 Cpe-Chr17:3144363 2.45E-177 transposed
Cpe12g00545 Cpe-Chr12:5586848 Cpe17g00420 Cpe-Chr17:3144363 0 wgd
Cpe17g00420 Cpe-Chr17:3144363 Cpe03g01037 Cpe-Chr3:8458185 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62944 PF07714 PK_Tyr_Ser-Thr 5.90E-43 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00420 - - csv:101213107 1132.09