Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe17g00473 | ATGGCGGACCGTTCTTCCGATCGCGAAATTGATTCAGGCTTTGATCAGGGCTCATCCCAACCACGTCTTTACAACCCTTACAAGGATCTCCAGGTTCCTTACCGAAACTTCCAGCTTCCAACCTCACCGGAGTTTCTCTTCGATGAAGAAGCTCGCCGCCAGCGTCGATCTTGGGGCGAGAATCTCACCTTCTACACCGGTTGCGGTTACCTCGCTGGTGCAGTCGGCGGAGCGTCTACGGGCTTCGTTTCCGGCGTCAAATCTTTCGAATCAGGTGATACTATGAAACTTCGGATCAATCGGATCCTGAACTCTTCTGGTCATTCAGGGCGTCTCTGGGGGAATCGACTCGGTGTGATTGGGTTACTATATGCTGGTTTGGAGAGCGGAATTGAGGCTGTGAGGGATACGGACGACGTATGGAACTGTGTCGCAGCGGGACTTGGCACCGGTGCGCTTTATCGTGCGGCAAGAGGAGTGAGATCAGCGGCCGTGGCCGGTGCTATTGGCGGCGTTGTGGTTGGAGTGGCGGTGACGGGTAAGCAGATGTTGAAGCGGTACGTGCCGATTTGA | 573 | 54.97 | MADRSSDREIDSGFDQGSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVGGASTGFVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAIGGVVVGVAVTGKQMLKRYVPI | 190 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 3526139 | 3526711 | + | Cp4.1LG17g04770.1 | Cpe17g00473 | 483791 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe17g00473 | 190 | Pfam | Tim17/Tim22/Tim23/Pmp24 family | 64 | 173 | - | - | |
| Cpe17g00473 | 190 | PANTHER | MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-2-LIKE | 17 | 190 | - | - | |
| Cpe17g00473 | 190 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Cpe17g00473 | 190 | PANTHER | TIM23 | 17 | 190 | IPR045238 | GO:0022857 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe17g00473 | Cpe-Chr17:3526139 | Cpe07g01033 | Cpe-Chr7:9310594 | 6.45E-06 | dispersed | |
| Cpe12g00606 | Cpe-Chr12:6042466 | Cpe17g00473 | Cpe-Chr17:3526139 | 2.36E-119 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe17g00473 | K17794 | - | csv:101221925 | 327.02 |