Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00475 ATGAAAATCGAGTCGATGAGACGGGGAAGGATAAGGGAGAGGATCCGGCGGAGCCATCTCTATACATTTGGTTGCATCCGGTCACAGAGTGCACATGAGGCCGACGATTCGAATCCATTAACAGGACCTGGTTTTTCACGAATTGTCTGTTGTAACCAACCTCATCTCCATGAGAGGCAGCCATTGAAATACTGCTTCAATTACATATCCACAACCAAGTATAATGTTCTTACTTTCTTGCCTAAGGCTCTCTTTGAGCAATTCAGGAGAGTTGCCAATTTGTACTTTCTTTTGGCTGCATTGTTGTCCCTCACACCAGTTGCCCCATTTTCTGCCATGAGCATGATTGCTCCTCTGGTATTTGTTGTTGGTCTCAGTATGGCTAAAGAAGCTCTCGAGGACTGGAGTCGATTCGTGCAGGATATGAAGGTTAATCTCAGGAAAGTGATTGTTCATAAAGGGGACGGTGTTTTTGGTCATAGACCTTGGCACAAGATTCGTGTAGGAGACATAGTGAAAGTAGAGAAGGATCAGTTCTTTCCCGCTGATCTACTTCTTTTGTCGTCGTGCTATGAGGACGGTATATGTTACGTGGAAACGATGAATTTGGATGGCGAGACTAATCTCAAAGTAAAGAGATCTTTGGAAGTAACCTTACCATTGGATGATGATGCTACCTTCAAAGACTTTACTGGAAAGATTTACTGTGAAGATCCAAACCCAAATCTTTACACATTTGTTGGTAACTTGGAGTATGATCGGCAGATTTATCCTCTTGATCCTAGCCAGATTCTCCTCAGAGATTCTAAATTGAGGAACACAGCTTATGCCTACGGGGTAGTGATATTTACTGGACATGATAGTAAAGTCATGCAGAATGCTACAAAATCTCCTTCCAAAAGAAGTAGAATAGAGAGAAAAATGGACAAGATTATTTACATCCTTTTTACCTTACTTGTATTGATATCATCAATGAGCTCAATAGGTTTTGCTGTGAAGACAAAGTACCAAATGACTGACTGGTGGTACTTACAAACTACTGGTGATGATCCACTGTATAACCCTCGTCAGCCAACCTTATCAGGGCTCATACATTTGATCACTGCTCTTATACTCTATGGATATTTGATACCGATCTCGCTCTATGTTTCCATCGAGGTTGTTAAGGTTCTACAAGCTTCCTTCATTAACCAAGATATTAACATGTATTGTGAAGAGACTAGTAATCCCGCTCGAGCTCGGACTTCAAATTTGAACGAGGAGTTGGGTCAGGTAGACACGATCCTATCCGACAAAACTGGCACTTTGACTTGTAATCAGATGGACTTTCTGAAATGTTCCATTGCTGGGACTGCGTATGGTGTTAAATCTAGTGAGGTTGAACTTGCAGCTGCAAGGCAGATGGCATATGACCTTGACGAGCAGGATGCAGATTATTCTGATGTTGTTGTGCAAAAAAATAGCCGACAGTCTTCCATGGCATGGGACCGAAAAGAATCGGAGATTGAATTGGAGACTGTTCTTACTTCAAGTGTTGTCAAAGAGCAGAAGTCTGCCATAAAGTATTTTGGTTTTGAGGACAGCCGTTTAACAAATGGAAACTGGTTGAATGAGCCTAATCATGACGTTCTTCTATTGTTCTTCAGAATTTTAGCAATTTGTCACACTGCAATTCCTGAGCTGAATGAGGAAACTGGTGCTTTTACTTATGAAGCAGAGTCCCCTGATGAAGGTGCTTTTCTTGTTGCAGCAAGAGAATTTGGTTTTGAGTTTTGTAAGAGAACACAATCAATCTTGGTTGTGCGTGAAAGATATCCTTCTCCTAACCAAGTAGTTGAAAGGGAATACAAAGTTTTAAATCTTTTGGATTTCACTAGCAAGAGAAAGAGAATGTCTGTAATTGTTAGGGATGAGTATGGCCATATTATTCTTCTCTGCAAAGGTGCTGATAGCATCATCTTCGATCGACTATCGAAGAACGGAAGAATGTATGAGGAAGCAACCACAAGGCATTTGAATGAATATGGAGAAGCTGGGTTGCGTACTCTGGCACTTGCTTATAGAAAGCTTGAGGAGTCCGAGTATACTGCTTGGAACAACGAGTTTCAGAAGGCTAAAACGTCCATTGGAGGAGATAGAGATGCAATGCTCGAGCGAGTGTCCGACCTCATGGAACGAGAATTAACCCTTGTTGGTGCTACCGCTGTGGAGGACAAGTTACAGAATGGGGTGCCCCAATGCATTGATAAACTTGCACAAGCTGGTCTTAAGATCTGGGTTTTGACTGGAGATAAAATGGAAACTGCCATCAACATAGGATATGCATGCAGTTTACTTCGACAGGGAATGAAGCGGATTTGCATATCAACAAGCTCAGATTCTTTAGCTCAGGAAGGAAAAGAGGCCATGAAAGAATATATTTTGAATCAAATCACCAATGCCTCGCAAATGATCAATCTGGAGAAGGATCCACACGCTGCATTCGCTTTAATCATTGATGGGAAGACTCTAACGTATGCTCTCGAAGATGATATGAAGTTTCAATTCCTTGGACTCGCTGTTGATTGTGCATCGGTCATTTGCTGTCGTGTCTCCCCCAAGCAAAAAGCCCTGGTAACAAGGTTAGTGAAAGAAGGTACTGGGAAAACCACTTTGGCAATTGGTGATGGCGCAAACGATGTGGGAATGATTCAAGAGGCCGATATTGGTGTCGGTATCAGCGGGGTTGAAGGTATGCAGGCTGTGATGGCTAGTGATTTCTCTATTGCCCAATTTCGGTTTCTTGAAAGGCTTCTGGTAGTCCATGGTCATTGGTGCTACAAGAGGATAGCGCAAATGATATGCTATTTCTTCTACAAGAATATCGCATTCGGATTAACGCTATTCTACTTCGAAGCATACGCGGGATTTTCTGGGCAATCAATATATGACGATTTCTACATGCTATCATTTAATGTCATACTCACCTCATTGCCTGTAATTTCCCTTGGAGTTTTTGAACAAGATGTCTCTTCTGAGGTGTGCCTACAGTTCCCTGCACTCTATCAGCAAGGCCCCCAAAACTTGTTCTTCGACTGGCCTCGAATTTTCGGATGGATGGGGAATGCTGTCTACTCCTCTATAGTTACTTTCTTCCTCAATCTCATCATCTTCTACGACCAGGCATTCCGCTCAGGCGGCCAAACTGCCGACATGACTGCTGTCGGAACCACCATGTTTACTTGCATCATATGGGCAGTAAATTGCCAGATTGCTCTCACAATGAGCCACTTCACCTGGATCCAACACCTTCTCGTCTGGGGTAGTATCGCCATGTGGTATTTGTTCATCTTACTCTATGGAATGGTCATTTCCTCTGGAAATGCATATAAAATATTCGTTGAAGCATTAGGACCTGCCCCTGTTTACTGGGTAGCCACCATCTTAGTAACAATTACCTGCAATCTCCCATATCTTGCCCATATATCCTTCCAGAGAAGCTTCCATCCAATGGATCATCACATAATCCAAGAAATCAAATACTACCGAAAGGATGTGGAAGACACACACATGTGGACCAGGGAAAGATCAAAAGCAAGGCAAAAAACCAAGATAGGATTCACAGCCAGAGTAGAAGCTAAGATCAGGCAGCTAAAAGGAAAGCTCCAAAAGAAGCACTCTTCCCTTGGAGCTCCTCCAACTGGTACTATTTCATGA 3696 42.67 MKIESMRRGRIRERIRRSHLYTFGCIRSQSAHEADDSNPLTGPGFSRIVCCNQPHLHERQPLKYCFNYISTTKYNVLTFLPKALFEQFRRVANLYFLLAALLSLTPVAPFSAMSMIAPLVFVVGLSMAKEALEDWSRFVQDMKVNLRKVIVHKGDGVFGHRPWHKIRVGDIVKVEKDQFFPADLLLLSSCYEDGICYVETMNLDGETNLKVKRSLEVTLPLDDDATFKDFTGKIYCEDPNPNLYTFVGNLEYDRQIYPLDPSQILLRDSKLRNTAYAYGVVIFTGHDSKVMQNATKSPSKRSRIERKMDKIIYILFTLLVLISSMSSIGFAVKTKYQMTDWWYLQTTGDDPLYNPRQPTLSGLIHLITALILYGYLIPISLYVSIEVVKVLQASFINQDINMYCEETSNPARARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVKSSEVELAAARQMAYDLDEQDADYSDVVVQKNSRQSSMAWDRKESEIELETVLTSSVVKEQKSAIKYFGFEDSRLTNGNWLNEPNHDVLLLFFRILAICHTAIPELNEETGAFTYEAESPDEGAFLVAAREFGFEFCKRTQSILVVRERYPSPNQVVEREYKVLNLLDFTSKRKRMSVIVRDEYGHIILLCKGADSIIFDRLSKNGRMYEEATTRHLNEYGEAGLRTLALAYRKLEESEYTAWNNEFQKAKTSIGGDRDAMLERVSDLMERELTLVGATAVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKRICISTSSDSLAQEGKEAMKEYILNQITNASQMINLEKDPHAAFALIIDGKTLTYALEDDMKFQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAYAGFSGQSIYDDFYMLSFNVILTSLPVISLGVFEQDVSSEVCLQFPALYQQGPQNLFFDWPRIFGWMGNAVYSSIVTFFLNLIIFYDQAFRSGGQTADMTAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLLVWGSIAMWYLFILLYGMVISSGNAYKIFVEALGPAPVYWVATILVTITCNLPYLAHISFQRSFHPMDHHIIQEIKYYRKDVEDTHMWTRERSKARQKTKIGFTARVEAKIRQLKGKLQKKHSSLGAPPTGTIS 1231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 3536107 3541164 - Cp4.1LG17g04800.1 Cpe17g00475 483793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00475 1231 SFLD C1.7: P-type atpase like 413 938 - -
Cpe17g00475 1231 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 64 1171 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cpe17g00475 1231 Pfam Cation transport ATPase (P-type) 554 658 - -
Cpe17g00475 1231 SUPERFAMILY Calcium ATPase, transmembrane domain M 61 1159 IPR023298 -
Cpe17g00475 1231 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 530 693 IPR023299 GO:0000166
Cpe17g00475 1231 Gene3D - 426 440 IPR023214 -
Cpe17g00475 1231 PRINTS P-type cation-transporting ATPase superfamily signature 429 443 - -
Cpe17g00475 1231 PRINTS P-type cation-transporting ATPase superfamily signature 887 906 - -
Cpe17g00475 1231 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 6 1223 - -
Cpe17g00475 1231 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 6 1223 - -
Cpe17g00475 1231 Gene3D - 441 489 IPR023299 GO:0000166
Cpe17g00475 1231 Gene3D - 595 731 IPR023299 GO:0000166
Cpe17g00475 1231 ProSitePatterns E1-E2 ATPases phosphorylation site. 431 437 IPR018303 -
Cpe17g00475 1231 Pfam Phospholipid-translocating ATPase N-terminal 51 116 IPR032631 -
Cpe17g00475 1231 SFLD p-type atpase 413 938 IPR044492 -
Cpe17g00475 1231 SUPERFAMILY HAD-like 417 931 IPR036412 -
Cpe17g00475 1231 MobiDBLite consensus disorder prediction 1212 1231 - -
Cpe17g00475 1231 Pfam Phospholipid-translocating P-type ATPase C-terminal 915 1163 IPR032630 -
Cpe17g00475 1231 Gene3D - 732 927 IPR023214 -
Cpe17g00475 1231 CDD P-type_ATPase_APLT_Dnf-like 67 1046 - -
Cpe17g00475 1231 SUPERFAMILY Calcium ATPase, transduction domain A 152 294 IPR008250 -
Cpe17g00475 1231 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 363 477 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe17g00475 1231 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 859 968 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe17g00475 1231 Gene3D - 125 297 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe17g00475 Cpe-Chr17:3536107 Cpe20g00099 Cpe-Chr20:522155 0 dispersed
Cpe12g00609 Cpe-Chr12:6053066 Cpe17g00475 Cpe-Chr17:3536107 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00475 K01530 - csv:101221220 2290.38