Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe17g00524 | ATGTCGTGGCAAACTTACGTCGATGATCACCTCATGTGTGAGATTGAAGGCAACCATCTCACCTCCGCCGCCATCATTGGACATGACGCCAGTGTTTGGGCGCAGAGCGCCTCTTTCCCTCAGTTTAAGCCGGAGGAGATTGCAGCGGTTATGAAAGATTTTGATGAGCCTGGATCTCTTGCCCCAACTGGTTTACACCTTGCTGGAACCAAATACATGGTTATCCAGGGCGAGCCTGGAGCTGTTGTTCGTGGCAAAAAGGGCGCTGGTGGAATCACTGTGAAGAAAACAGAGAAAGCTGTGATTATTGGTATATACGATGAACCTGTGACTCCTGGACAATGCAATATGGTGGTGGAAAGGTTGGGAGATTACCTGATCGAACAGGGTCTGTAG | 396 | 49.49 | MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSLAPTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVERLGDYLIEQGL | 131 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 4370964 | 4373495 | + | Cp4.1LG17g05180.1 | Cpe17g00524 | 483842 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe17g00524 | 131 | PRINTS | Plant profilin signature | 1 | 14 | IPR005455 | GO:0003779 | |
Cpe17g00524 | 131 | PRINTS | Plant profilin signature | 27 | 40 | IPR005455 | GO:0003779 | |
Cpe17g00524 | 131 | PRINTS | Plant profilin signature | 52 | 66 | IPR005455 | GO:0003779 | |
Cpe17g00524 | 131 | PRINTS | Plant profilin signature | 71 | 80 | IPR005455 | GO:0003779 | |
Cpe17g00524 | 131 | PRINTS | Plant profilin signature | 84 | 99 | IPR005455 | GO:0003779 | |
Cpe17g00524 | 131 | PRINTS | Plant profilin signature | 104 | 117 | IPR005455 | GO:0003779 | |
Cpe17g00524 | 131 | PRINTS | Plant profilin signature | 117 | 130 | IPR005455 | GO:0003779 | |
Cpe17g00524 | 131 | SUPERFAMILY | Profilin (actin-binding protein) | 2 | 130 | IPR036140 | - | |
Cpe17g00524 | 131 | PRINTS | Profilin signature | 3 | 12 | IPR005455 | GO:0003779 | |
Cpe17g00524 | 131 | PRINTS | Profilin signature | 21 | 30 | IPR005455 | GO:0003779 | |
Cpe17g00524 | 131 | PRINTS | Profilin signature | 40 | 60 | IPR005455 | GO:0003779 | |
Cpe17g00524 | 131 | PRINTS | Profilin signature | 64 | 78 | IPR005455 | GO:0003779 | |
Cpe17g00524 | 131 | PRINTS | Profilin signature | 100 | 113 | IPR005455 | GO:0003779 | |
Cpe17g00524 | 131 | PRINTS | Profilin signature | 113 | 130 | IPR005455 | GO:0003779 | |
Cpe17g00524 | 131 | SMART | prof_2 | 1 | 131 | IPR005455 | GO:0003779 | |
Cpe17g00524 | 131 | CDD | PROF | 2 | 130 | IPR005455 | GO:0003779 | |
Cpe17g00524 | 131 | Gene3D | Dynein light chain 2a, cytoplasmic | 1 | 131 | - | - | |
Cpe17g00524 | 131 | PANTHER | PROFILIN-A | 1 | 131 | - | - | |
Cpe17g00524 | 131 | PANTHER | PROFILIN | 1 | 131 | IPR005455 | GO:0003779 | |
Cpe17g00524 | 131 | Pfam | Profilin | 1 | 130 | IPR005455 | GO:0003779 | |
Cpe17g00524 | 131 | ProSitePatterns | Profilin signature. | 1 | 8 | IPR027310 | GO:0003779 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g01090 | Cpe17g00524 | CCT | |
Cpe02g01699 | Cpe17g00524 | CCT | |
Cpe03g01090 | Cpe17g00524 | ECH | |
Cpe02g01699 | Cpe17g00524 | ECH | |
Cpe12g00643 | Cpe17g00524 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g01155 | Cpe-Chr11:9529439 | Cpe17g00524 | Cpe-Chr17:4370964 | 6.88E-82 | dispersed | |
Cpe12g00643 | Cpe-Chr12:6305539 | Cpe17g00524 | Cpe-Chr17:4370964 | 6.69E-93 | wgd | |
Cpe17g00524 | Cpe-Chr17:4370964 | Cpe02g01699 | Cpe-Chr2:13966508 | 6.40E-76 | wgd | |
Cpe17g00524 | Cpe-Chr17:4370964 | Cpe03g01090 | Cpe-Chr3:9000799 | 3.94E-77 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe17g00524 | K05759 | - | jre:108981956 | 243.047 |