Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00525 ATTGTTTATATCATAATCTTACGCATCAACTCATTAGATGAGAGCCCAAAAATCATCAAAATCGACACCTATCGAACTCGATCAAAGTCTCGTAGGTACATCTCTACATTATCTGATTATGGAGGAGACGAAACAGCACCTCTCCAACCAATCTCTTCGTTGTTGCCATGTCTAAATCGACCTCACCCGTTTACACTTGATTGTCACAATGTGCATCAAGACTTCGAATGGTACTTGATGGACGAAGACTACAAGTTCCCTACAGCTCACAGTATGTCCCAACTATCAAATTCATTCGTCTCCACCAACATAGAGAAAAACAGAGTACCCATTGGAGGATTTCGCCATTTTCTTGAATTCCAGAAGGTGGGGGTTGGTGGATCGTCATTTTTCTTGTGGGTTTTCTTCTTTCTCTCTCTAAACATGGGGAAAGCTACCAGATGGTTGAAGGGTCTGTTGGGAATCAAGAAAGACAAAGACCCATCTGGGAATTCCGATTCAAAACCAACGCCGGTGGTTTCCGACAGAAAGGAGAAGAAAAGATGGAGTTTTGCGAAGTCCGGTAGAGATTCCGGCCAAACGCCGCCGCCAACTGTGGCTGCTCGAAAAGCTCTACGAGCTCTCAAGGGACTGGTTAAGTTGCAGGCTGTCGTTCGAGGATTTCTCGTCCGAAAACGAGCTGCTGCAACTCTTCACAGTATGCAGGCACTTTTTAGAGCTCAAACTGCTCTTAGAACTCAAAGAGCTCGTCGATCTTTCAATAAAGAAAATAGGTTTATCCCCGAGATTCGACCCCGAAAATCTGCAGAACGTTTTGATGAAATAAGAAGTGAATTTCATAGTAAGAGATTGTCTATAGCATCATCTTACGAAACCTCCATCAACTCATTGGACGAGAGCCCAAAAATCGTCGAAATCGACACGTACCGAACCCGATCAAAGTCTCGTAGGTACATCTCTACATTGTCCGAATATGGAGGAGACGAAGCAGCACCACTTCAAGCAATCACTTCGCCATTGCCATATTCGAATCGACCTCGCACGTTTACGCTTGATTGTCACAATGTGCATCGAGACTTCGAATGGTGTTTGATGGGCGAAGACTGCAAGTTCCCTACAGCTCACAGCACGCCTCGGCTATCGAATTCATTCGCCTCAACGAACATGTCAGTCACCCCATCAAAGAGCGTCTGCGGGGACAGCTTCTTTAGGCCTTACATGAACTGCCCGAATTATATGGCGAACACGCAATCGTTCAAGGCGAAATTGAGGTCTCAAAGTGCCCCAAAACAAAGGCCAGAGCCAGGATCCAAGAAGAAGCTGTCGTTGAATGAAATAATGGCAGCAAGAAACAGCTTAAGCAGTAATGCAGAGACCAAGCAACCAAACTCTGCAAGAACA 1401 45.32 IVYIIILRINSLDESPKIIKIDTYRTRSKSRRYISTLSDYGGDETAPLQPISSLLPCLNRPHPFTLDCHNVHQDFEWYLMDEDYKFPTAHSMSQLSNSFVSTNIEKNRVPIGGFRHFLEFQKVGVGGSSFFLWVFFFLSLNMGKATRWLKGLLGIKKDKDPSGNSDSKPTPVVSDRKEKKRWSFAKSGRDSGQTPPPTVAARKALRALKGLVKLQAVVRGFLVRKRAAATLHSMQALFRAQTALRTQRARRSFNKENRFIPEIRPRKSAERFDEIRSEFHSKRLSIASSYETSINSLDESPKIVEIDTYRTRSKSRRYISTLSEYGGDEAAPLQAITSPLPYSNRPRTFTLDCHNVHRDFEWCLMGEDCKFPTAHSTPRLSNSFASTNMSVTPSKSVCGDSFFRPYMNCPNYMANTQSFKAKLRSQSAPKQRPEPGSKKKLSLNEIMAARNSLSSNAETKQPNSART 467
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
17 4376627 4379990 - Cp4.1LG17g05290.1 Cpe17g00525 483843
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00525 467 ProSiteProfiles IQ motif profile. 209 236 IPR000048 GO:0005515
Cpe17g00525 467 Pfam Protein of unknown function (DUF4005) 377 460 IPR025064 -
Cpe17g00525 467 PANTHER - 9 101 - -
Cpe17g00525 467 PANTHER IQ-DOMAIN 5-RELATED 142 194 - -
Cpe17g00525 467 MobiDBLite consensus disorder prediction 159 198 - -
Cpe17g00525 467 PANTHER IQ-DOMAIN 5-RELATED 201 455 - -
Cpe17g00525 467 PANTHER - 201 455 - -
Cpe17g00525 467 MobiDBLite consensus disorder prediction 422 442 - -
Cpe17g00525 467 PANTHER - 142 194 - -
Cpe17g00525 467 PANTHER IQ-DOMAIN 5-RELATED 9 101 - -
Cpe17g00525 467 MobiDBLite consensus disorder prediction 171 186 - -
       

Event-related genes


       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe17g00525 Cpe-Chr17:4376627 Cpe08g00280 Cpe-Chr8:1807896 9.94E-26 dispersed
Cpe12g00644 Cpe-Chr12:6309281 Cpe17g00525 Cpe-Chr17:4376627 6.34E-30 wgd
Cpe17g00525 Cpe-Chr17:4376627 Cpe18g00396 Cpe-Chr18:5187816 1.64E-07 wgd
Cpe17g00525 Cpe-Chr17:4376627 Cpe02g01697 Cpe-Chr2:13961624 2.66E-57 wgd
Cpe17g00525 Cpe-Chr17:4376627 Cpe03g01092 Cpe-Chr3:9011328 6.82E-08 wgd
Cpe17g00525 Cpe-Chr17:4376627 Cpe04g01092 Cpe-Chr4:9504874 8.99E-06 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00525 - - cmo:103500774 414.075