Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe17g00544 | ATGGCTTGGTTCACCATTGGAAGCTTCCAAGATTCCTTTAGCTTGCGCTCTTGCAAGGCGTATCTTGCTGAGTTCATCTCCACCTTGCTCTTCGTTTTCGCCGGCGTCGGTTCCGCCATTGCCTACGATAAAATAACATCCTCTGCAGCTTTAGACCCAGCGGGGCTGGTGGCGGTGGCGGTTTGCCATGGATTTGCTCTGTTTGTTGCAGTCTCTGTCGGAGCCAACATCTCCGGTGGCCATGTCAACCCAGCGGTGACATTCGGCCTTCTTCTTGGTGACCAAATCAGCCTAATTACGACCATATTTTACTGGATTGCTCAGCTTCTTGGCTCCATTGTCGCCTGCTACCTTCTCAAATATGTCACTGGCGGCCTGGCAGTTCCGGTCCACAGCGTGGCGGCCGGCATCGGAGCAGCGGAAGGAGTTGTGATGGAAATTGTCATCACATTCGGTCTGGTTTACACGGTCTATGCGACGGCGGCCGACCCAAAGAAGGGATCTTTGGGCACAATTGCGCCAATTGCCATCGGATTCATCGTCGGAGCAAACATTTTGGCAGCCGGACCGTTTTCCGGCGGATCGATGAACCCGGCCCGGTCATTTGGACCGGCGGTGGTCAGTGGGGACTTTCACGACAACTGGATTTACTGGGTTGGGCCACTCGTTGGCGGTGGCTTAGCTGGGCTTATCTACTTTTACGCCTTTATGGCCTATGGGCCCAGCCCAATTCCAAGCGATTACTAA | 747 | 54.22 | MAWFTIGSFQDSFSLRSCKAYLAEFISTLLFVFAGVGSAIAYDKITSSAALDPAGLVAVAVCHGFALFVAVSVGANISGGHVNPAVTFGLLLGDQISLITTIFYWIAQLLGSIVACYLLKYVTGGLAVPVHSVAAGIGAAEGVVMEIVITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFHDNWIYWVGPLVGGGLAGLIYFYAFMAYGPSPIPSDY | 248 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 4517086 | 4522524 | + | Cp4.1LG17g05510.1 | Cpe17g00544 | 483862 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe17g00544 | 248 | Gene3D | Glycerol uptake facilitator protein. | 2 | 240 | IPR023271 | - | |
Cpe17g00544 | 248 | PANTHER | AQUAPORIN-8 | 1 | 248 | IPR034294 | - | |
Cpe17g00544 | 248 | Pfam | Major intrinsic protein | 15 | 232 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe17g00544 | 248 | ProSitePatterns | MIP family signature. | 81 | 89 | IPR022357 | - | |
Cpe17g00544 | 248 | SUPERFAMILY | Aquaporin-like | 14 | 242 | IPR023271 | - | |
Cpe17g00544 | 248 | PRINTS | Major intrinsic protein family signature | 19 | 38 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe17g00544 | 248 | PRINTS | Major intrinsic protein family signature | 63 | 87 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe17g00544 | 248 | PRINTS | Major intrinsic protein family signature | 100 | 119 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe17g00544 | 248 | PRINTS | Major intrinsic protein family signature | 145 | 163 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe17g00544 | 248 | PRINTS | Major intrinsic protein family signature | 178 | 200 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe17g00544 | 248 | PRINTS | Major intrinsic protein family signature | 215 | 235 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe17g00544 | 248 | PANTHER | MIP PROTEIN | 1 | 248 | - | - | |
Cpe17g00544 | 248 | CDD | MIP | 19 | 232 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe17g00544 | 248 | TIGRFAM | MIP: MIP family channel proteins | 23 | 232 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00205 | Cpe-Chr3:1022954 | Cpe17g00544 | Cpe-Chr17:4517086 | 5.15E-95 | dispersed | |
Cpe05g00252 | Cpe-Chr5:1436359 | Cpe17g00544 | Cpe-Chr17:4517086 | 4.58E-120 | dispersed | |
Cpe07g00219 | Cpe-Chr7:1415743 | Cpe17g00544 | Cpe-Chr17:4517086 | 4.16E-83 | dispersed | |
Cpe13g00078 | Cpe-Chr13:604864 | Cpe17g00544 | Cpe-Chr17:4517086 | 4.85E-40 | dispersed | |
Cpe17g00544 | Cpe-Chr17:4517086 | Cpe19g00437 | Cpe-Chr19:3899285 | 4.25E-84 | dispersed | |
Cpe17g00544 | Cpe-Chr17:4517086 | Cpe10g00246 | Cpe-Chr10:1431950 | 2.42E-99 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe17g00544 | K09873 | - | csv:101218611 | 460.685 |