Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00570 ATGGGGATGAACTCCAATCGAGTTGAGAGCTTGGAATGTCGTGAAACGGTGTTGAGAATTCCGCCGGAGGAAATGTCGGCGCCTCCGCAACAGACGGAGGAGATTCACAAAGTCTGCTTGCCGCCTACGCAGACTACACTTCAGAAACTCAAGCATAAGCTCTCTGAGGTGTGCTTCCCGGATGATCCGTTTTACAGATTCAAGAACCAAACGTGGTTCACAAAACTGCTTTTAGGCCTTCAATTTCTGTTTCCTATTTTCCAATGGGGACCTGATTATACCCTAGCTCTTTTCAAGTCTGACATCGTTTCTGGTCTCACAATTGCTAGCCTTGCTATTCCTCAGGGAATAAGTTATGCGAAACTTGCGAATTTGCCGCCAATCATCGGTTTATATTCAAGTTTTGTGCCTCCACTGATATATTCTGTTCTTGGAAGCTCTAGACATCTTGCTGTTGGTCCTGTTTCTATCGCCTCTTTGGTCATGGGATCGATGATCACTGAGGCAGTCTCTTTTAATGAACAGCCAACTCTGTTTCTTAAGTTAGCTTTTACAGCCACCTTCTTTGCTGGTGTATTCCAAGCATCTTTAGGTTTGTTAAGGCTAGGCTTTGTCATTGATTTTCTGTCAAAGGCTACTTTAGTTGGGTTTATGGCTGGTGCAGCAGTCATCGTGTCATTGCAACAGCTCAAAGGGTTGCTTGGAATCATCCATTTCACCAACAAAATGCAATTTATTCCTGTCATGTCGTCTGTCTTTCACCACAAAGATGAGTGGTCTTGGCAAACTATTGTTTTAGGCTTCATTTTCCTACTCTTTCTTCTGGGAACGAGGCATATAAAAATGAACATAAATCACAAGAACAATAGTTCTGGTTCTAATTCGTTCTATCGTACACGACTACAGAGTATCAAGAAACCAAAGCTTTTCTGGATTTCAGCAGCTGCTCCACTGACATCAGTTATATTGTCCACTATTTTAGTCTTCCTTCTTAGAGACAAAGTTCCTGGAATCTCAGTGATTGGTCATTTGCCAAAGGGCATCAATCCACCATCTTTGAACATGCTGTACTTTACTGGTCCTCAATTGGCACTTGCCATAAAAACTGGCATTATAACTGGAATTCTCTCGCTGACTGAAGGAATTGCCGTAGGAAGGACGTTTGCTGGTTTGAAAAACTATCAAGTGGATGGGAATAAAGAAATGATGGCCATTGGTTTTATGAACATGGCTGGATCTTGTTCTTCCTGCTATGTCACAACAGGGTCATTTTCTCGGTCGGCTGTGAATTATAATGCCGGGGCACAAACAGCAGTCTCAAATGTAGTGATGTCTGCAACCGTGCTCATAACGTTGTTGTTTCTGATGCCACTGTTCCATTATACTCCAAATTTCATCCTAGCAGCCATCATTATAACAGCAGTAATTGGGCTAATTGATTACCAAGCAGCCTGTAGGTTATGGAAAGTTGACAAGCTTGATTTCGTAGCTTGTGTTTGTTCTTTCTTCGGCGTTCTTTTCATCTCGGTTCCGTTGGGTCTTGCCATTGCAGTTGGAGTATCTATTTTCAAGATTCTTCTGCATGTCACGAGGCCGAACACCATGGTCTTGGGGAATATTTCTGGGACTCAAATATTCCAAAACATCGACCGATACCGAGAAGCCTTAAGGGTGCCTTCGTTCCTCATTCTTGCCATTGAATCTCCAATCTACTTTGCAAACTCGACATACCTACAAGAAAGGATTCTAAGGTGGATTAGGGAAGACGAAGAGCGAATAAAAGCGACGAACGACAGTCCACTGAAATGTGTAATCCTAGACATGACAGCTGTGACATCCATAGACACAAGTGGTATAGAAGCAGTATGTGAAATTAGGAAGATCTTGATGCAAAAATCACTACAGTTTGTTCTTGCAAATCCAGTTGCAAACGTGACGGAAAAACTGTATAAATCAAAGGCCTTGGAGCAATTCGAGTTTAACGGTCTCTACCTCTCAGTCGGAGAAGCTGTGATGGACATTTCTTCTTTGTGGAAGAGGCAGCCATAA 2049 42.65 MGMNSNRVESLECRETVLRIPPEEMSAPPQQTEEIHKVCLPPTQTTLQKLKHKLSEVCFPDDPFYRFKNQTWFTKLLLGLQFLFPIFQWGPDYTLALFKSDIVSGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSVLGSSRHLAVGPVSIASLVMGSMITEAVSFNEQPTLFLKLAFTATFFAGVFQASLGLLRLGFVIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIIHFTNKMQFIPVMSSVFHHKDEWSWQTIVLGFIFLLFLLGTRHIKMNINHKNNSSGSNSFYRTRLQSIKKPKLFWISAAAPLTSVILSTILVFLLRDKVPGISVIGHLPKGINPPSLNMLYFTGPQLALAIKTGIITGILSLTEGIAVGRTFAGLKNYQVDGNKEMMAIGFMNMAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNVVMSATVLITLLFLMPLFHYTPNFILAAIIITAVIGLIDYQAACRLWKVDKLDFVACVCSFFGVLFISVPLGLAIAVGVSIFKILLHVTRPNTMVLGNISGTQIFQNIDRYREALRVPSFLILAIESPIYFANSTYLQERILRWIREDEERIKATNDSPLKCVILDMTAVTSIDTSGIEAVCEIRKILMQKSLQFVLANPVANVTEKLYKSKALEQFEFNGLYLSVGEAVMDISSLWKRQP 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 4661197 4665074 - Cp4.1LG17g05800.1 Cpe17g00570 483888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00570 682 PANTHER SULFATE TRANSPORTER 28 681 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe17g00570 682 Pfam STAS domain 552 670 IPR002645 -
Cpe17g00570 682 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271|GO:0008272
Cpe17g00570 682 ProSiteProfiles STAS domain profile. 551 674 IPR002645 -
Cpe17g00570 682 Pfam Sulfate permease family 98 499 IPR011547 GO:0016021
Cpe17g00570 682 Gene3D STAS domain 531 676 IPR036513 -
Cpe17g00570 682 PANTHER SULFATE TRANSPORTER 3.4-RELATED 28 681 IPR030317 -
Cpe17g00570 682 SUPERFAMILY SpoIIaa-like 556 671 IPR036513 -
Cpe17g00570 682 CDD STAS_SulP_like_sulfate_transporter 552 667 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g00701 Cpe17g00570 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe13g00577 Cpe-Chr13:5683783 Cpe17g00570 Cpe-Chr17:4661197 0 dispersed
Cpe15g00240 Cpe-Chr15:2196356 Cpe17g00570 Cpe-Chr17:4661197 0 dispersed
Cpe17g00570 Cpe-Chr17:4661197 Cpe17g00870 Cpe-Chr17:6736358 0 dispersed
Cpe12g00701 Cpe-Chr12:6618880 Cpe17g00570 Cpe-Chr17:4661197 0 wgd
Cpe17g00570 Cpe-Chr17:4661197 Cpe18g00445 Cpe-Chr18:5470892 0 wgd
Cpe17g00570 Cpe-Chr17:4661197 Cpe04g01145 Cpe-Chr4:9837186 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00570 K17471 - csv:101203079 1153.27