Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00574 ATGAAAAAATTCCGACTTCACTGCGTCTCTCTGCAAATCCAAGTGAGAATGGAAGGTCCTTCGCTTCACGGTACGCTTCACGCCACAATCTATGAAGTCGACAGGTTGCATACTGGTGGTGGATCCAACGTCTTCAGCAAGTTAATGCAAAACCTTGAGGAGGCGGTTGGAATTGGCAAAGGAGTTACCAGACTATATGCAACTATAGATTTAGAAAAGGCTAGAGTCGGGAGGACACGAAAATTGGAAAATGAACCCCATAACCCTAGATGGTATGAATCTTTTCACGTCTACTGTGCCCATAGGGCATCAAATAGACAAGGTTGTAAAGTCTCTTTGTATCAAGATGCTCATATCCCTGATAATTTTGTTCCTAAAATACCTCTTGCTGGAGGAAAGAATTATGCTCCGTCCAGATGTTGGGAAGATATTTTCGACGCTATACAAAATGCAAAACACATGATCTACATCACAGGATGGTCTGTTTATACAGAAATCGCCTTGATAAGAGACTCAAGGAGGTCAAAGCCCGGAGGAGACACCATGCTTGGTGAGCTGCTTAGGAAGAAAGCAAGTGAAGGCGTCAGAGTTCTTATGCTTGTCTGGGATGACAGAACATCAGTCGGTTTACTAAAGAAGGATGGTCTGATGGCTACTCATGATGAAGAAACTGAACAGTTCTTTCGAGATACTGATGTCCACTGTATCTTGTGCCCTCGTAATCCTGACGATGGTGGAAGCATTGTTCAAGACCTACAAATCTCTACAATGTTCACTCACCATCAGAAGATTGTTGTTGTGGATAGCCCAATGCCAAGTGGAGATTCGGATAAGAGGAGAATTGTGAGTTTCGTTGGTGGCCTTGATCTTTGTGATGGCAGGTATGACACACCCTTTCATTCCCTCTTCAGGACATTGGATACTGCACATCACGATGATTTCCATCAACCCAACTTTCCTGGTGCATTAATAACAAAAGGTGGACCAAGGGAACCTTGGCACGACATCCATTCCCGACTTGAAGGGCCCATTGCCTGGGATGTCTTATTCAATTTTGAGCAAAGGTGGAAGAAACAAGGTGGGAAGGATGTCCTTGTGCAGCTTCGAGAGCTTGATGAAATAATTATTCCTCCATCTCCTGTTATGTACCCAGATGATCATGAAACCTGGAATGTTCAATTGTTTAGATCTATAGATGGTGGGGCAGCCTTTGGCTTTCCTGAGACCCCCGAAGATGCTGCTAGAGCTGGGCTAGTTAGTGGGAAAGATAACATTATTGATCGAAGTATTCAAGACGCTTACATTAATGCTATTCGGCGGGCTAAGAATTTTATTTACATTGAAAACCAATATTTCCTTGGAAGTTGTTTTGGATGGTCTCCTGAGGATATCAAGCCTGAGGATATTGGAGCCTTGCACTGTATCCCAAGAGAGCTTTCCCTTAAGATCGTAAGTAAGATTGCAGCAGGAGAAAGGTTCACTGTCTATGTAGTTGTCCCAATGTGGCCAGAAGGAATACCAGAAAGTGGATCGGTTCAGGCAATATTAGATTGGCAGAGGAGGACATTTGAAATGATGTATAAAGACGTGATTCAGGCTCTTAGAGATAACGGTATCGAGGAGGACCCCCGTAACTACTTGACATTCTTCTGTCTTGGCAATCGGGAAGTGAAGAGGTCTGGAGAATATGAACCTCCAGAGGCACCAGAGGAGGATTCCGATTACATGAAAGCCCAGCAGGCCAGGCGTTTCATGATTTATGTTCACACCAAGATGATGATTGTTGATGATGAGTACATAATTGTTGGATCGGCCAATATCAACCAGAGATCCATGGATGGAGCAAGGGACTCTGAGATAGCTATGGGCGGTTATCAGCCATATCATCTGTCAACCCATGAACCTGCACGTGGTCAAGTTCACGGATTCCGAATGTCCCTATGGTATGAACACCTTGGTATGCTTGATGAATCTTTCCTTCGGCCAGAAAGCGAAGAATGTGCTTCGAAGGTTAACAGAATTGCTGATAAGTATTGGGATATGTATTCAAGTGAAGCACTTGAGAGGGACTTGCCCGGTCACCTCCTCCGCTATCCCATCGGCATAAGCAGTGAAGGTAATGTGACAGAGCTCCCAGGATTTGAGTTCTTCCCCGACACCAAAGCACGTATACTCGGAACCAAATCTGACTACCTCCCTCCCATCCTCACTACTTAG 2217 44.61 MKKFRLHCVSLQIQVRMEGPSLHGTLHATIYEVDRLHTGGGSNVFSKLMQNLEEAVGIGKGVTRLYATIDLEKARVGRTRKLENEPHNPRWYESFHVYCAHRASNRQGCKVSLYQDAHIPDNFVPKIPLAGGKNYAPSRCWEDIFDAIQNAKHMIYITGWSVYTEIALIRDSRRSKPGGDTMLGELLRKKASEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETEQFFRDTDVHCILCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSPMPSGDSDKRRIVSFVGGLDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGALITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWKKQGGKDVLVQLRELDEIIIPPSPVMYPDDHETWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCFGWSPEDIKPEDIGALHCIPRELSLKIVSKIAAGERFTVYVVVPMWPEGIPESGSVQAILDWQRRTFEMMYKDVIQALRDNGIEEDPRNYLTFFCLGNREVKRSGEYEPPEAPEEDSDYMKAQQARRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGGYQPYHLSTHEPARGQVHGFRMSLWYEHLGMLDESFLRPESEECASKVNRIADKYWDMYSSEALERDLPGHLLRYPIGISSEGNVTELPGFEFFPDTKARILGTKSDYLPPILTT 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 4702323 4706963 - Cp4.1LG17g05780.1 Cpe17g00574 483892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00574 738 SUPERFAMILY Phospholipase D/nuclease 372 667 - -
Cpe17g00574 738 Gene3D Endonuclease Chain A 130 372 - -
Cpe17g00574 738 PANTHER PHOSPHOLIPASE D 105 738 IPR015679 -
Cpe17g00574 738 SUPERFAMILY Phospholipase D/nuclease 90 371 - -
Cpe17g00574 738 SMART pld_4 584 611 IPR001736 GO:0003824
Cpe17g00574 738 SMART pld_4 256 294 IPR001736 GO:0003824
Cpe17g00574 738 Pfam Phospholipase D C terminal 656 728 IPR024632 -
Cpe17g00574 738 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 256 294 IPR001736 GO:0003824
Cpe17g00574 738 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 584 611 IPR001736 GO:0003824
Cpe17g00574 738 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 21 118 IPR035892 -
Cpe17g00574 738 Gene3D Endonuclease Chain A 410 627 - -
Cpe17g00574 738 Pfam Phospholipase D Active site motif 256 294 IPR001736 GO:0003824
Cpe17g00574 738 Pfam Phospholipase D Active site motif 585 611 IPR001736 GO:0003824
Cpe17g00574 738 PANTHER PHOSPHOLIPASE D ALPHA 1 22 105 - -
Cpe17g00574 738 PANTHER PHOSPHOLIPASE D ALPHA 1 105 738 - -
Cpe17g00574 738 ProSiteProfiles C2 domain profile. 7 142 IPR000008 -
Cpe17g00574 738 PIRSF PLD_plant 103 738 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Cpe17g00574 738 PIRSF PLD_plant 12 105 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Cpe17g00574 738 PANTHER PHOSPHOLIPASE D 22 105 IPR015679 -
Cpe17g00574 738 Pfam C2 domain 52 118 IPR000008 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01652 Cpe17g00574 CCT
Cpe02g01652 Cpe17g00574 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01652 Cpe-Chr2:13756953 Cpe17g00574 Cpe-Chr17:4702323 4.50E-32 dispersed
Cpe11g00328 Cpe-Chr11:1747964 Cpe17g00574 Cpe-Chr17:4702323 1.44E-11 dispersed
Cpe17g00574 Cpe-Chr17:4702323 Cpe19g00883 Cpe-Chr19:6467980 0 dispersed
Cpe17g00574 Cpe-Chr17:4702323 Cpe12g00003 Cpe-Chr12:10623 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00574 K01115 - csv:101206113 1254.58