Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00589 AGAATGGCCATGGCGACTTGGAATCAAACTCCCTTTGATTGCTTCATCATCCTGCTTTTGCTTGTAGCGTTTTCAAACGCTCAATCTGATGTATTGACACAAGGCCAGGAACTAACACCTGGGTCTTGGCTAATCTCAGCCACAGGGGCTTTTTCCCTCGGGTTTTACAGTCCTAGTCTACTCAACAACAGTCACATAGCCATTTGGTATGAAGGAGATCCAAAGAACCCAGTGTGGATAGCCAATCCAAATTTTGCATTTCCCAGAGATTTTGGGATGCCCTGTCTCACAATCGACAGCAACGGCAGCTTGAAGATTGTACCTAAACAAAGAAATGGACATGCCTATAGTTTCTATCTCTATGAAGCTGAAGAGCCCATGAACAGCAGCGCCATTCTACTCGACAATGGCAATTTTATATTAGGTGTGTTGAATCCTGATGGGTCAATCAAGCAACAGCTATGGCAGAGCTTTGATCATCCAACCGACACTCTTCTACCTGGGATGAAAATTGGGATCAATCATAAAACTGGATCTACTTGGTCTATAACATCACAAAGAGGAGATTATTCTGTTCTATCAGGGTCTTTCACACTCACAATGAATCCCAACAATACAAACCAGTTACTGCTATTACATAGAGGAGCTATTTTCTGGACTAGTGGAAACTGGCGGGATGGCCGGTTTGAATTCTCAGAAGAACTTTCAAGCATCAACAATCAAGAATTCGTGTTCAGGCGATTTTCGAATGAGAATGAGACCTTCTTCAATTACTCAACCTCCAACTTGAACAATGGAGTGATTGAAATTCAACCCCGGTTGAGATTGGTAAACGATGGAAGATTGGTGGGGAGTAAGTGGGATTTGAAAGTTGAATGTCCCTATTTTGAGAACGAGTTGTTTGAGGTGGCTAAGGGTGTTTCTGGAGATGGGTGTGTGGGGAAGAAGCAGCACAAAGTACCAGAATGTCGAAATCCGCCGAAACGATTTTCGACCACGCAGAGATTTGGTAACATGGAGAGAAATAGTTTGAGATACAGTGACAGTGAGAATCTCACAATTTATGATTGTGAAAAGATATGCATTTCAAGCTGTGGTTGCATAGCTTTTAGTTCTACGAATGAAGAAGGCACTGGCTGTGAGACATGGAATGTGGGAGCAATGTTTGTTCCTGGGAAGGGAAGCAGGCGGATTATTTGGTCCATTCAGGAGACTGAAGGGAAAGGAAAAAAAAGGGTATGGTTGGAAGTAACAATCGGTGTAATAGTACCTACAACTCTTCTCCTATTGTGTTTTATTTTCTATCTCAAATGGAAAACACAAATACACAAAGCTATAAGAAAACTGAGGAAGGATTCAGAGCATCAAAATTTTCTACAACAAATGGGGGCCAAATCTAATAGTTCTAACATTCTGAAAACTAAGAACAAGCAGAGAAGAGATATAAAGAACTCCGAACTGCAGTTCTTCACATTTGAAAATGTAGTTTCTGCAACAAATAATTTCGCTGACAATTGTAGGCTGGGAGAAGGTGGTTTTGGACCCGTTTATAAGGTACATCCAGTGAGAAATTTAGTACTAGATTGGGACAAACGACTGCACATAATCCAAGGGATAATTCAAGGACTACTTTACCTTCACACCTATTCTAGATTACGAATAGTTCATCGAGATTTAAAAGTTAGCAACATCTTGCTTGATGATGAAATGAATGCAAAAATATCGGATTTTGGCATGGCTAGAATCTTTAAGCCCACGGAACAAGAAGCAAATACTAGTCACATTGTTGGTACATATGGTTATATATCACCTGAATTTGTAATGGGCGGTACTTTCTCGATAAAATCAGATGTCTACAGCTTTGGAGTGCTGTTATTAGAGATCATAACAGCTCAAAAAAACTACAACAATTATGACGTTGGACGGCCTATCAATCTCATAGGACATGCATGGGAACTGTGGATGGAAGGCAGAGGAGAAGAACTGATTGATTCAACTTTGTACAACTCCGATCAGAAACAAAAAGCTCTAAGATGCATCCATGTTAGTCTTCTATGCGTCCAACAAATGCCAGCAGATAGACCTACCATGCTTGATGTTCATTCCATGATTCTTAATGATACTACTCAACTTCCATTGCCTAAACAGCCTCCATTTTTCATCACCCAGAACGCCAAATTGGAAGGGATGATAGATGGCACAGAGATCAAATCAGAATCAACAACAGAAATACGTTCTTCGAATAACATGTCAGTCTCTATTATGAATCAGTTCTCTTTAAGACCGTCAAATTTTCGTCCTATAAATTCATTGGTTGAAAGCAATGAAATTGAGGTAGGAATCATTATCGCAGAAATTTGCTTACTCGTTCCCATTTCACCGTTTGCCCCTCCAAATGGTGTAAAGGCTACACGAATCACCCTGCCCATGGACCAA 2436 40.56 RMAMATWNQTPFDCFIILLLLVAFSNAQSDVLTQGQELTPGSWLISATGAFSLGFYSPSLLNNSHIAIWYEGDPKNPVWIANPNFAFPRDFGMPCLTIDSNGSLKIVPKQRNGHAYSFYLYEAEEPMNSSAILLDNGNFILGVLNPDGSIKQQLWQSFDHPTDTLLPGMKIGINHKTGSTWSITSQRGDYSVLSGSFTLTMNPNNTNQLLLLHRGAIFWTSGNWRDGRFEFSEELSSINNQEFVFRRFSNENETFFNYSTSNLNNGVIEIQPRLRLVNDGRLVGSKWDLKVECPYFENELFEVAKGVSGDGCVGKKQHKVPECRNPPKRFSTTQRFGNMERNSLRYSDSENLTIYDCEKICISSCGCIAFSSTNEEGTGCETWNVGAMFVPGKGSRRIIWSIQETEGKGKKRVWLEVTIGVIVPTTLLLLCFIFYLKWKTQIHKAIRKLRKDSEHQNFLQQMGAKSNSSNILKTKNKQRRDIKNSELQFFTFENVVSATNNFADNCRLGEGGFGPVYKVHPVRNLVLDWDKRLHIIQGIIQGLLYLHTYSRLRIVHRDLKVSNILLDDEMNAKISDFGMARIFKPTEQEANTSHIVGTYGYISPEFVMGGTFSIKSDVYSFGVLLLEIITAQKNYNNYDVGRPINLIGHAWELWMEGRGEELIDSTLYNSDQKQKALRCIHVSLLCVQQMPADRPTMLDVHSMILNDTTQLPLPKQPPFFITQNAKLEGMIDGTEIKSESTTEIRSSNNMSVSIMNQFSLRPSNFRPINSLVESNEIEVGIIIAEICLLVPISPFAPPNGVKATRITLPMDQ 812
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 4880840 4885359 + Cp4.1LG17g09090.1 Cpe17g00589 483907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00589 812 Pfam D-mannose binding lectin 77 187 IPR001480 -
Cpe17g00589 812 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 77 519 - -
Cpe17g00589 812 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 526 722 - -
Cpe17g00589 812 ProSiteProfiles Protein kinase domain profile. 385 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe17g00589 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 554 566 IPR008271 GO:0004672|GO:0006468
Cpe17g00589 812 ProSiteProfiles Bulb-type lectin domain profile. 29 154 IPR001480 -
Cpe17g00589 812 PIRSF SRK 292 521 IPR024171 GO:0004674
Cpe17g00589 812 PIRSF SRK 1 292 IPR024171 GO:0004674
Cpe17g00589 812 PIRSF SRK 519 757 IPR024171 GO:0004674
Cpe17g00589 812 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 77 519 - -
Cpe17g00589 812 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 526 722 - -
Cpe17g00589 812 SMART blect_4 29 161 IPR001480 -
Cpe17g00589 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 225 IPR036426 -
Cpe17g00589 812 Gene3D Transferase(Phosphotransferase) domain 1 527 706 - -
Cpe17g00589 812 Gene3D - 22 159 IPR036426 -
Cpe17g00589 812 SMART serkin_6 400 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe17g00589 812 Gene3D Phosphorylase Kinase; domain 1 471 526 - -
Cpe17g00589 812 Pfam Protein kinase domain 531 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe17g00589 812 SUPERFAMILY Protein kinase-like (PK-like) 486 723 IPR011009 -
Cpe17g00589 812 Pfam PAN-like domain 350 384 IPR003609 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00691 Cpe-Chr12:6565514 Cpe17g00589 Cpe-Chr17:4880840 2.04E-96 dispersed
Cpe17g00589 Cpe-Chr17:4880840 Cpe19g00983 Cpe-Chr19:6910868 5.05E-14 dispersed
Cpe17g00589 Cpe-Chr17:4880840 Cpe15g00772 Cpe-Chr15:7885245 1.63E-16 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62951 PF00069 Pkinase 1.20E-26 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00589 - - csv:101221041 831.247