Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00601 ATGAGAAAAGAAGAAAATCACATCAGGGTTAATATTGGAGAATTCCCTGGTAGAATTACGCGTGCTCGGGCTGCTGCATTTAGTGCATCAGCACAGCTGCCTCCAAGAGTACCTGCGCAACAAGAGAAGCGGGTTGCACAAGCCAATCGGAAAAGAGCTGCTTCAGAAGAAAAGAGCTGCCATTCTATTGATAAATCATTACGACCATATAAACGGAGGGCCGTGCTTCAGGATGTCAGCAATGTATGCTGTGAACCTTCATACTCGGAATGTTTTGATGCAGCTAAAGTTCAGGCCAATTGTAGTAAGCCGACTATCAGAAACCGTTTCAAGAAGTCCAAAGGAGCTTCATCAGTTTGTGTGGCTAACTCCAAGGTTCCTCTTGACCGTAGAACTGAAGGAGCCTCATCAGTTGGTGTGGTTTACTCCAAGGTCCCTCTTGACCTTAGAGCAGAAGATGTACAAGAAAATGTCAAATCAAAAGCTAAGTTGAAAGTTGAACATTCAAGTAATTCTGAAGACCATGGGACACATCATCGGGTGGGCGGTGGTATAAAGGAAGAGGTCACAAGTTATCTTCGGGATGATAATTCGAGATCTCTAAGTCCTTTAGAGTCTCAGAATTTTCAAAATAAAGAGAAAGTGTTGCCTCTGGGGACAAGAAGCAACCTGGACGTTACGGACATCGATTGTAATGACAAAGATGCTCAACTGTGCTCTGTCTACGCCCATGAGATCTACAACAATTTACGTGTTGCTGAGCTAACCAGAAGGCCACGTCCAGATTTCATGGAAACAGTGCAAACAGATATTACCCAAAGCATGCGGGGTATATTGGTTGATTGGCTTGTAGAGGTATCGGAGGAATACAAGTTAGTACCAGACACTCTCTACCTAACTGTATTTTTCGTCGATTGGTTTCTCTCCCAAAATTACATCGAGAGACAAAAGCTTCAACTGTTGGGTATCACTTGCATGTTAATTGCTTCGAAGTACGAAGAAATTTGTTCCCCACGCGTTGAAGACTTTTGTTTCATCACTGACAGCACCTACACAAAAGAGGAGGTTTTGAATATGGAAGGTCAGATATTGAAGCATATGGGCTTTCAACTTTCTGCACCAACTGTAAAATCTTTCCTCAGGAGATACGTTCGTGCTGCACAAACAACTTTCAAGACCCCTAGTCTTGAACTCGAGTGCCTTGCCAACTATCTAGCCGAATTAACACTGGTCGACTATGGTTTCTTGAATTTTCTTCCCTCGGTCATAGCTGCATCAGCTGTATTTCTTTCAAAATGGTCGTTGGATCAGTCGGGTCACCCATGGAATTCAACCCTGGAATACTATACCTCATATAAAGCATCAGATCTGAAACCAACTGTTCTTGCTTTACAAGATTTACAGTTGAACACCAATGGTTGTCCTCTCAGTTCGATTCGTGTCAAGTATCGACAAGAAAAGTTCAAAGCCGTCGCAACTTTGTCGTCTCCGAAATTACTTGATACGCTATTCTGA 1515 42.97 MRKEENHIRVNIGEFPGRITRARAAAFSASAQLPPRVPAQQEKRVAQANRKRAASEEKSCHSIDKSLRPYKRRAVLQDVSNVCCEPSYSECFDAAKVQANCSKPTIRNRFKKSKGASSVCVANSKVPLDRRTEGASSVGVVYSKVPLDLRAEDVQENVKSKAKLKVEHSSNSEDHGTHHRVGGGIKEEVTSYLRDDNSRSLSPLESQNFQNKEKVLPLGTRSNLDVTDIDCNDKDAQLCSVYAHEIYNNLRVAELTRRPRPDFMETVQTDITQSMRGILVDWLVEVSEEYKLVPDTLYLTVFFVDWFLSQNYIERQKLQLLGITCMLIASKYEEICSPRVEDFCFITDSTYTKEEVLNMEGQILKHMGFQLSAPTVKSFLRRYVRAAQTTFKTPSLELECLANYLAELTLVDYGFLNFLPSVIAASAVFLSKWSLDQSGHPWNSTLEYYTSYKASDLKPTVLALQDLQLNTNGCPLSSIRVKYRQEKFKAVATLSSPKLLDTLF 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 4969863 4976551 - Cp4.1LG17g09010.1 Cpe17g00601 483919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00601 504 CDD CYCLIN 374 464 IPR013763 -
Cpe17g00601 504 SUPERFAMILY Cyclin-like 374 499 IPR036915 -
Cpe17g00601 504 PANTHER CYCLINS 50 504 IPR039361 -
Cpe17g00601 504 Pfam Cyclin, C-terminal domain 374 496 IPR004367 -
Cpe17g00601 504 SMART cyclin_7 281 365 IPR013763 -
Cpe17g00601 504 SMART cyclin_7 378 466 IPR013763 -
Cpe17g00601 504 Gene3D - 245 493 - -
Cpe17g00601 504 PIRSF Cyclin_A_B_D_E 31 503 IPR039361 -
Cpe17g00601 504 Gene3D - 259 372 - -
Cpe17g00601 504 SMART Cyclin_C_2 374 497 IPR004367 -
Cpe17g00601 504 CDD CYCLIN 275 364 IPR013763 -
Cpe17g00601 504 SUPERFAMILY Cyclin-like 235 371 IPR036915 -
Cpe17g00601 504 Pfam Cyclin, N-terminal domain 245 371 IPR006671 -
Cpe17g00601 504 MobiDBLite consensus disorder prediction 163 185 - -
Cpe17g00601 504 PANTHER CYCLIN-A2-4 50 504 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g00714 Cpe17g00601 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00263 Cpe-Chr7:1707425 Cpe17g00601 Cpe-Chr17:4969863 3.68E-102 dispersed
Cpe13g00635 Cpe-Chr13:6074518 Cpe17g00601 Cpe-Chr17:4969863 1.80E-103 dispersed
Cpe12g00714 Cpe-Chr12:6723254 Cpe17g00601 Cpe-Chr17:4969863 0 wgd
Cpe17g00601 Cpe-Chr17:4969863 Cpe06g00355 Cpe-Chr6:1977645 3.15E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00601 K06627 - csv:101222299 838.18