Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00606 ATGTCATCATCTTCTTTGATGGCTTTCCTCCTGGTTTTCCTCTGCTTCATCCTTTACGCCCCGATCGCCCCCGCATTTGCCCTCAGCCCTGCCGGCCCTGGCTCCGGCGCCGCCTCCTTCATTCCTAAAGACAACTTTCTCCTTGACTGTGGTGCCACAAGGGAACTTGGTGCACTCCCTGATGGAAGAGTGTTCAAAACTGATGACCAATCCCTGCAGTTCCTAGATGCCAAGGATGAGATGGTAGCCACCGCCCCACCGGATACAAACGCGCCGTCCCCCGTCGATTTGACAGCCAGAGTCTTCCTCCAAGAAGCTGCTTACCATTTTCAGATGGCTGAGCCTGGATGGCATTGGCTGCGACTCCATTTCTTGCCTGTTAAAACCAATGACTTTGATCTCTTGGAGGCCAAATTTTCAGTTGTCACTGAAAAGTATGTGTTGCTTCACAGCTTCAACATCAACAATGAATCCACATTTGTTCTCAAGGAGTTTCTACTTAATATCACTGAACCAAAACTCTCAATCAAGTTCCTCCCAATGAAGAATTCAGCTGCTTTCATCAACGCCATCGAGGTCGTTTCTGCTCCGGAGGGCATGATCTCCGACTCCAACATGGAGCTGTCTCCGGTCGGGATGGTCGACGGCCTAAGCAAATATGCATTTCAGACAGTGTTTAGGCTGAACATGGGAGGTCCTGCAATCACTCCAAGAAATGACACTCTTGGGAGGACATGGGAGAGAGATGAAGCTTACAGGAAACCTTTAGCTGCTGGAAAGAATGTTGTTGTTCAGACCAACAGCATCAAATATCAAGACGGCCTGGAAGAAATTGGGAAGTTAATTGCGCCTCCAAGTGTCTATGCAAGTGCAGTTCAAATGGGAGATGTTCAATCCATGGAACCAAATTTCAATATCACATGGAGATTTGAGGCAGATCCCTCATTTGGGTATCTAATTCGCTTCCATTTCTGTGACATTGTCAGCAAAGTTCTAAACAATCTGTATTTCAATGTTTATGTAAATGGGAAGGCTGCCATAACCAACTTGGATTTGTCACACAAGCTAGGAGTTTTGGCAACTGCATACTACCAGGATGTTGTGGTTAATTCTTCTTTCATTGTAGAGGGATTGACAATTCAGATTAGTCCAGCAAGCGTCGATACGGGCGATAGGAATGCGATTCTAAATGGGTTAGAGGTAATGAAAATAAGCAATTCTGTTAATAGTCTGGATGGAGAGTTTGGAGTGGATGGTAAGTCTGCAAATGGGTCAAACCGTGGCACGGTTGCTGCTGTTGGGTTCGCAATGATGTTCGGGGCATTTGTCGGGCTCGGTGCGATGGTGATGAAATGGCACAAGAGACCTCAAGATTGGCAGAAGAGGAACAGTTTCTCTTCATGGTTGCTTCCTGTACATGCTGATGCACCAAACTCCGACAACCGCCCTGCTGCTGTGAAGCCAGAACAGAACAGGCAACCGGCAGAGGTCCCAAATCCCATTGATGATCACTCCGGCAGTGCAATGTTTGCTCATTTTTCTAATCTCAATGGTAGATGA 1560 47.05 MSSSSLMAFLLVFLCFILYAPIAPAFALSPAGPGSGAASFIPKDNFLLDCGATRELGALPDGRVFKTDDQSLQFLDAKDEMVATAPPDTNAPSPVDLTARVFLQEAAYHFQMAEPGWHWLRLHFLPVKTNDFDLLEAKFSVVTEKYVLLHSFNINNESTFVLKEFLLNITEPKLSIKFLPMKNSAAFINAIEVVSAPEGMISDSNMELSPVGMVDGLSKYAFQTVFRLNMGGPAITPRNDTLGRTWERDEAYRKPLAAGKNVVVQTNSIKYQDGLEEIGKLIAPPSVYASAVQMGDVQSMEPNFNITWRFEADPSFGYLIRFHFCDIVSKVLNNLYFNVYVNGKAAITNLDLSHKLGVLATAYYQDVVVNSSFIVEGLTIQISPASVDTGDRNAILNGLEVMKISNSVNSLDGEFGVDGKSANGSNRGTVAAVGFAMMFGAFVGLGAMVMKWHKRPQDWQKRNSFSSWLLPVHADAPNSDNRPAAVKPEQNRQPAEVPNPIDDHSGSAMFAHFSNLNGR 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 5017980 5020586 - Cp4.1LG17g08880.1 Cpe17g00606 483924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00606 519 Gene3D - 45 197 - -
Cpe17g00606 519 Gene3D - 220 406 - -
Cpe17g00606 519 MobiDBLite consensus disorder prediction 476 505 - -
Cpe17g00606 519 Pfam Malectin-like domain 48 404 IPR024788 -
Cpe17g00606 519 PANTHER BNAC03G60370D PROTEIN 30 474 - -
Cpe17g00606 519 PANTHER OS07G0166700 PROTEIN 30 474 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01482 Cpe-Chr4:11775534 Cpe17g00606 Cpe-Chr17:5017980 4.58E-141 dispersed
Cpe16g00577 Cpe-Chr16:6551378 Cpe17g00606 Cpe-Chr17:5017980 1.83E-81 dispersed
Cpe17g00606 Cpe-Chr17:5017980 Cpe17g00371 Cpe-Chr17:2686582 4.80E-68 dispersed
Cpe12g00709 Cpe-Chr12:6673911 Cpe17g00606 Cpe-Chr17:5017980 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00606 - - cpep:111778821 916.761