Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe17g00635 | ATGGGGATATATCTGAGCTCCCCCAAAACAGAAAAGGCCTCGGATGATGGTGAGAACGAAAGACTTCGGTACGGCCTTTCCTCTATGCAAGGGTGGCGTGCAACCATGGAAGATGCTCATGCAGCCTGTCTAGATTTGGACACATCAACATCTTTCTTTGGTGTTTATGATGGCCATGGAGGTAAAGCAGTTTCTAAGTTCTGTGCCAAGTACCTTCACGGACAGGTGCTCAAGCATGAATCATACATGGCTGGAGATGTGGGAACTTCATTACAGAAGTCCTTTCTCAGAATGGATGAGATGATGCTTGGACAGAGGGGATGGAGAGAGTTAGCTGTTTTGGGAGACAAAATGGACAAGATTTCTGGTATGATAGAAGGATTTATATGGTCGCCCAAGAGTAGCGAAGCTAACAACCAAGTGGACAATTGGCCTGCGGAGGAGGGACCTCACTCTGACTTTCATGGACCAAATGCTGGAAGCACAGCTTGTGTTGCAATCATTCGAAATAACCAACTTGTGGTAGCAAATGCTGGTGATTCTCGCTGTGTCATTTCCAGAAAGGGCCAGGCATATAATCTATCTAAAGATCACAAGCCTGATCTTGAGGTTGAGAAGGACAGGATTCTGAAAGCTGGTGGTTTCATCCGAGTTGGTCGTGTCAATGGAAGTCTCAACTTGGCACGAGCTATAGGAGACATGGAATTTAAGCAGAACAAAAGTATGCCTGCAGAAAAGCAGATTGTAACAGCCAACCCAGATGTAACAACTGTTGAGCTTTGTGAGGATGACGAGTTTCTTGTAATTGCCTGTGATGGGATCTGGGATTGCATGTCTAGCCAACAACTGGTCGACTACATCGGAGATCAACTAAAAACAGAAAGCAAACTCTCAGTTATTTGCGAGAGAGTATTTGACAGATGTTTGGCACCTTCAGCTGGTGGTGAAGGATGTGACAACATGACCATGATCTTGGTTCAGTTTAAGAAACCCTTCAACCCAAATGCTGCTTCTGCTGAGGAGCTGCCTTCATCGTCCAATCAACTTAGATCTGATGATCCAAACGAAGGCTCTTCTAAAACCGAATAG | 1089 | 45.27 | MGIYLSSPKTEKASDDGENERLRYGLSSMQGWRATMEDAHAACLDLDTSTSFFGVYDGHGGKAVSKFCAKYLHGQVLKHESYMAGDVGTSLQKSFLRMDEMMLGQRGWRELAVLGDKMDKISGMIEGFIWSPKSSEANNQVDNWPAEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGDSRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNKSMPAEKQIVTANPDVTTVELCEDDEFLVIACDGIWDCMSSQQLVDYIGDQLKTESKLSVICERVFDRCLAPSAGGEGCDNMTMILVQFKKPFNPNAASAEELPSSSNQLRSDDPNEGSSKTE | 362 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 5186043 | 5191298 | - | Cp4.1LG17g08530.1 | Cpe17g00635 | 483953 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe17g00635 | 362 | PANTHER | PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED | 1 | 341 | - | - | |
Cpe17g00635 | 362 | ProSiteProfiles | PPM-type phosphatase domain profile. | 23 | 328 | IPR001932 | - | |
Cpe17g00635 | 362 | ProSitePatterns | PPM-type phosphatase domain signature. | 52 | 60 | IPR000222 | GO:0043169 | |
Cpe17g00635 | 362 | Pfam | Protein phosphatase 2C | 23 | 102 | IPR001932 | - | |
Cpe17g00635 | 362 | Pfam | Protein phosphatase 2C | 155 | 313 | IPR001932 | - | |
Cpe17g00635 | 362 | CDD | PP2Cc | 23 | 328 | IPR001932 | - | |
Cpe17g00635 | 362 | SUPERFAMILY | PP2C-like | 3 | 330 | IPR036457 | - | |
Cpe17g00635 | 362 | MobiDBLite | consensus disorder prediction | 338 | 354 | - | - | |
Cpe17g00635 | 362 | SMART | PP2C_4 | 13 | 326 | IPR001932 | - | |
Cpe17g00635 | 362 | Gene3D | - | 1 | 329 | IPR036457 | - | |
Cpe17g00635 | 362 | MobiDBLite | consensus disorder prediction | 336 | 362 | - | - | |
Cpe17g00635 | 362 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 341 | IPR015655 | GO:0004722|GO:0006470 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00317 | Cpe-Chr2:1677448 | Cpe17g00635 | Cpe-Chr17:5186043 | 0 | dispersed | |
Cpe17g00635 | Cpe-Chr17:5186043 | Cpe09g00038 | Cpe-Chr9:231284 | 1.31E-38 | dispersed | |
Cpe12g00778 | Cpe-Chr12:7048385 | Cpe17g00635 | Cpe-Chr17:5186043 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe17g00635 | K17499 | - | csv:101214132 | 681.404 |