Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00636 ATGATTATCACCGTGAAGGATTCGACGATGGTGAGACCAGCGGCGGAGACACCGCGCCGGAGTCTCTGGAACTCGAACGTCGATCTGGTGGTGCCGAGTATCCACACGCCGAGCGTCTACTTCTACCGACCAACCGGTGCTTCCAATTTCTTCGACAGTCAGGTTCTCAAGGATGGCCTAAGCAAGGCGCTGGTGCCGTTCTATCCAATGGCTGCACGGTTACGGCGCGATGAGGACGGTCGAATCGAGATCGATTGTAACGCTGAAGGTGTGCTTCTTGTCGAGGCTGAGACGACGGCGATTATCGATGATTTCGGTGATTTCACGCCGACGTTACGGCTCCGACAACTTATTCCGGCCGTCGATTATTCCGGCGGAATCGAATCGTATCCGTTGTTGGTGTTACAGGTACCACACATTCCGTGCCTCGTTTCTATTTGTCGAGTTTCGCTCGGCGTCGGGATGCAACACCACCTGGCCGATGGCTTCTCTGGTCTCCACTTCATCAACACTTGGTCCGACATGTCGCGTGGCCTCGACCTCAAGCTCTCACCATTCATCGACCGGAGCCCTCTCCGAGCGCGGGATCCACCTCAACCAATTTTTCGACATGTCGAATACCAACCGGCTCCGCCCATGAAAACCCCGGTCCAACCCGACCCGGAAGGGACCACCGTCTCCACCTTCAAATTGAGTCGCGAGCAGCTCAATCTACTCAAAGCCAAATCCAAGGAAAACGGCAACACTACCAACTACAGCTCCTACGAGATGCTCTCTGCCCACGTCTGGCGGTGCACGTGCAAGGCACGTAACCTGCCGGAAGATCAGGACACTAAGCTCTACATTCCCACCGACGGCCGTGCCCGGTTACGCCCGCCGCTTCCCAACGGCTACTTCGGTAACGTCATCTTCACGGCGACGCCGGTAGCCGTCGCAGGGGAACTGATGTCGAAACCGACATGGTTCGCCGCTGGCAAGATCCACGAAGCTTTGATTCAGATGGACAACGATTATTTGAGATCAGCTTTGGACTATCTCGAGGTTCAGCCGGACTTATCGGCGTTGGTTCGTGGGGCTCATACTTTCCGGAATCCGAATTTGGGGATCACGAGCTGGGTTCGGCTTCCGATTCACGACGCCGATTTCGGGTGGGGCCGGCCGATTTTTATGGGCCCCGGCGGAATTGCGTACGAGGGATTGTCGTTTGTAATCCCGAGTGCTTCCGACGACGGCAGCTTATCGGTGGCCATTTCTCTCCAGACTCAACATATGAAGGCGTTTGAGAAGCTGTTCTTTGATATCTGA 1305 55.63 MIITVKDSTMVRPAAETPRRSLWNSNVDLVVPSIHTPSVYFYRPTGASNFFDSQVLKDGLSKALVPFYPMAARLRRDEDGRIEIDCNAEGVLLVEAETTAIIDDFGDFTPTLRLRQLIPAVDYSGGIESYPLLVLQVPHIPCLVSICRVSLGVGMQHHLADGFSGLHFINTWSDMSRGLDLKLSPFIDRSPLRARDPPQPIFRHVEYQPAPPMKTPVQPDPEGTTVSTFKLSREQLNLLKAKSKENGNTTNYSSYEMLSAHVWRCTCKARNLPEDQDTKLYIPTDGRARLRPPLPNGYFGNVIFTATPVAVAGELMSKPTWFAAGKIHEALIQMDNDYLRSALDYLEVQPDLSALVRGAHTFRNPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFVIPSASDDGSLSVAISLQTQHMKAFEKLFFDI 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 5193780 5195318 + Cp4.1LG17g08640.1 Cpe17g00636 483954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00636 434 Pfam Transferase family 2 429 - -
Cpe17g00636 434 Gene3D - 1 209 IPR023213 -
Cpe17g00636 434 SUPERFAMILY CoA-dependent acyltransferases 202 424 - -
Cpe17g00636 434 Gene3D - 214 434 IPR023213 -
Cpe17g00636 434 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 433 - -
Cpe17g00636 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 433 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00096 Cpe-Chr14:517412 Cpe17g00636 Cpe-Chr17:5193780 3.63E-45 dispersed
Cpe17g00636 Cpe-Chr17:5193780 Cpe19g00203 Cpe-Chr19:1635651 1.23E-72 dispersed
Cpe12g00779 Cpe-Chr12:7055464 Cpe17g00636 Cpe-Chr17:5193780 0 wgd
Cpe17g00636 Cpe-Chr17:5193780 Cpe06g00304 Cpe-Chr6:1683716 5.93E-26 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00636 K13065 - csv:101214857 772.311