Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00683 TTGCAGGGAAGAGAACTAACCATGGCTGATCAGGTTCAACATCCCACCATCTATCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCGGGATTCCGTGCTTGTGATGATGGCTTCAGGAACCCTGCACTTTACCAGAGACGTGCATCAATTAGAAATTATTCAAATGCTGCTTTTCAATACCCTGCTGTGCAATCCTGCGTTGCTACAACTGATCTTTCTAGGGTTGCCACGACAGCCTCCCCCATTTTTGTTCCGGCCCCTGCTGAGAAAGGAAACTTTATGCTTGACTTTCTCATGGGCGGTGTCTCTGCCGCTGTATCCAAGACAGCCGCTGCCCCAATTGAACGTGTCAAGCTTTTGATCCAGAACCAGGACGAGATGATTAAAGCTGGACGTCTGTCTGAGCCATACAAGGGTATTGGTGATTGTTTCAAGCGTACAATCCAAGATGAGGGTTTTGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTCAAGAGACTTTTCAACTTCAAGAAAGATAAGGATGGTTACTGGAAATGGTTTGCCGGTAACCTGGCATCAGGTGGTGCAGCTGGTGCTTCATCCCTTCTTTTCGTTTACTCTCTTGACTATGCTCGAACCCGATTGGCAAACGATGCCAAAGCTGCCAAGAAAGGTGGTGGTGGAAGGCAATTCAATGGACTGGTTGATGTTTACAGGAAGACATTGCAGTCCGATGGTATTGCTGGTCTTTACCGTGGATTTAACATTTCTTGTGTTGGTATCATCGTGTACCGTGGTTTATACTTCGGTATGTACGATTCTCTGAAGCCTGTTCTCTTGACCGGAAAGTTGCAGGATAGCTTCTTCGCTAGTTTCGCCCTCGGTTGGTTGATCACCAACGGTGCTGGCCTTGCATCCTACCCAATCGACACTGTCCGTAGAAGAATGATGATGACATCTGGTGAAGCCGTGAAGTACAAGAGCTCAATGGATGCCTTCTCTCAGATCCTGAAGAACGAAGGTGCCAAGTCTCTGTTCAAGGGTGCCGGAGCTAACATTCTCCGTGCCGTTGCTGGCGCTGGTGTGCTCGCCGGTTACGACAAGCTGCAGATTCATAGGGAAGAACTAACCATGGCTGATCAGGTTCAACATCCCACCATCTATCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCGGGATTCCGTGCTTGTGATGATGGCTTCAGGAACCCTGCACTTTACCAGAGACGTGCATCAATTAGAAATTATTCAAATGCTGCTTTTCAATACCCTGCTGTGCAATCCTGCGTTGCTACAACTGATCTTTCTAGGGTTGCCACGACTGCCTCCCCCATTTTTGTTGCGGCCCCTGCTGAGAAAGGAAACTTTATGCTTGACTTTCTCATGGGTGGTGTCTCTGCCGCTGTATCCAAGACAGCCGCTGCCCCAATTGAACGTGTCAAGCTTTTGATTCAAAACCAGGACGAGATGATTAAAGCTGGACGTCTGTCTGAGCCATACAAGGGTATTGGTGATTGTTTCAAGCGTACAATCCAAGATGAGGGTTTTGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTCAAGAGACTCTTCAACTTCAAGAAAGATAAGGATGGTTACTGGAAATGGTTTGCTGGTAACCTGGCATCAGGTGGTGCAGCTGGTGCTTCATCCCTCCTTTTCGTTTACTCTCTTGACTATGCTCGTACCCGATTGGCAAACGATGCCAAAGCTGCTAAGAAAGGTGGTGGTGGAAGGCAATTCAATGGACTGGTTGATGTTTACAGGAAGACATTGCAGTCCGATGGTATTGCTGGTCTTTACCGTGGATTTAACATTTCTTGTGTTGGTATCATCGTGTACCGTGGTTTATACTTCGGTATGTACGATTCTCTGAAGCCTGTTCTCTTGACCGGAAAGTTGCAGGATAGCTTCTTCGCTAGTTTCGCCCTCGGTTGGTTGATCACCAACGGTGCTGGCCTTGCATCCTACCCAATCGACACTGTCCGTAGAAGAATGATGATGACATCTGGTGAAGCCGTGAAGTACAAGAGCTCAATGGATGCCTTCTCTCAGATCTTGAAGAACGAAGGTGCCAAGTCTCTGTTCAAGGGTGCCGGAGCTAACATTCTCCGTGCCGTTGCTGGCGCTGGTGTGCTCGCCGGTTACGACAAGCTGCAGGTGATCGTGTTCGGAAAGAAATACGGATCAGGCGGAAACTTTATGCTTGACTTTCTCATGGGTGGTGTCTCTGCCGCTGTATCCAAGACAGCCGCTGCCCCAATTGAACGTGTCAAGCTTTTGATCCAAAACCAGGACGAGATGATTAAAGCTGGACGTCTGTCTGAGCCATACAAGGGTATTGGTGATTGTTTCAAGCGTACAATCCAAGATGAGGGTTTTGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTCAAGAGACTCTTCAACTTCAAGAAAGATAAGGATGGTTACTGGAAATGGTTTGCTGGTAACCTGGCATCAGGTGGTGCAGCTGGTGCTTCATCCCTCCTTTTCGTTTACTCTCTTGACTATGCTCGTACCCGATTGGCAAACGATGCCAAAGCTGCCAAGAAAGGTGGTGGTGGAAGGCAATTCAATGGACTGGTTGATGTTTACAGGAAGACATTGCAGTCCGATGGTATTGCTGGTCTTTACCGTGGATTTAACATTTCTTGTGTTGGTATCATCGTGTACCGTGGTTTATACTTCGGTATGTACGATTCTCTGAAGCCTGTTCTCTTGACCGGAAAGTTGCAGGATAGCTTCTTCGCTAGTTTCGCCCTCGGTTGGTTGATCACCAACGGTGCTGGCCTTGCATCCTACCCAATCGACACTGTCCGTAGAAGAATGATGATGACATCTGGTGAAGCCGTGAAGTACAAGAGCTCAATGGATGCCTTCTCTCAGATCTTGAAGAACGAAGGTGCCAAGTCTCTGTTCAAGGGTGCCGGAGCTAACATTCTCCGTGCCGTTGCTGGCGCTGGTGTGCTCGCCGGTTACGACAAGCTGCAGGTGATCGTGTTCGGAAAGAAATACGGATCAGGCGACATGGCCGATCAGGTTCGACATCCCACCATCCATCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCTGGGGTTGCTTCAGGTTTCCGAGCTTGTGATGATGGCTTCAGGAACCCTGCACTTTACCAGAGACGTGCATCAATCAGCAATTATTCAAATGCTGCTTTTCAATACCCTGCTGTGCAATCCTGCGTTGCTACAACTGATCTTTCTAGGGTTGCCTCTACTGCCTCCCCCATTTTTGTTGCGGCCCCTGCTGAGAAAGGAAACTTTATGCTTGATTTTCTCATGGGTGGTGTCTCTGCCGCTGTATCCAAGACTGCCGCTGCCCCAATTGAACGTGTCAAGCTCTTAATTCAAAACCAGGACGAGATGATTAAAGCTGGACGTCTGTCTGAGCCATACAAGGGTATTGGTGATTGTTTCAAGCGTACAATCCAAGATGAGGGTTTTGGTTCATTGTGGAGAGGAAACACTGCCAATGTTATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCATTTAAAGATTACTTCAAGAGGCTGTTCAACTTCAAGAAAGATAGAGATGGTTACTGGAAATGGTTTGCTGGTAACCTGGCATCAGGTGGTGCAGCTGGTGCCTCATCCCTTCTTTTCGTTTACTCTCTTGACTATGCTCGTACCCGATTGGCAAATGATGCCAAAGCTGCGAAGAAAGGTGGTGGAGGAAGGCAATTCAATGGACTGGTTGATGTTTACAGGAAGACATTGCAGTCCGATGGTATTGCTGGTCTTTACCGTGGATTTAACATTTCTTGTGTTGGTATCATCGTGTACCGTGGTCTATACTTCGGAATGTACGATTCCTTGAAGCCCGTTCTTTTGACCGGAAAGTTGCAGGATAGCTTCTTCGCTAGTTTCGCCCTTGGTTGGCTGATCACCAACGGTGCTGGGCTTGCATCATACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCTGGTGAAGCAGTGAAGTACAAGAGCTCATTGGATGCCTTCTCTCAAATCTTGAAGAACGAGGGTGCGAAGTCTCTGTTCAAGGGTGCCGGAGCTAACATCCTCCGTGCCGTTGCTGGTGCTGGTGTGCTCGCTGGTTACGACAAGTTGCAGGTTATCGTGTTCGGAAAGAAATACGGATCCGGTGGCGGCTAA 4428 47.9 LQGRELTMADQVQHPTIYQKVAGQLSLQSRVASGFRACDDGFRNPALYQRRASIRNYSNAAFQYPAVQSCVATTDLSRVATTASPIFVPAPAEKGNFMLDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTIQDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQIHREELTMADQVQHPTIYQKVAGQLSLQSRVASGFRACDDGFRNPALYQRRASIRNYSNAAFQYPAVQSCVATTDLSRVATTASPIFVAAPAEKGNFMLDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTIQDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGNFMLDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTIQDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGDMADQVRHPTIHQKVAGQLSLQSGVASGFRACDDGFRNPALYQRRASISNYSNAAFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGNFMLDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTIQDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGG 1475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 5467714 5479527 + Cp4.1LG17g08100.1 Cpe17g00683 484001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00683 1475 SUPERFAMILY Mitochondrial carrier 480 768 IPR023395 -
Cpe17g00683 1475 PRINTS Adenine nucleotide translocator signature 141 162 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe17g00683 1475 PRINTS Adenine nucleotide translocator signature 306 322 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe17g00683 1475 PRINTS Adenine nucleotide translocator signature 200 213 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe17g00683 1475 PRINTS Adenine nucleotide translocator signature 97 109 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe17g00683 1475 PRINTS Adenine nucleotide translocator signature 174 186 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe17g00683 1475 Gene3D Mitochondrial carrier domain 98 389 IPR023395 -
Cpe17g00683 1475 Gene3D Mitochondrial carrier domain 1175 1471 IPR023395 -
Cpe17g00683 1475 Gene3D Mitochondrial carrier domain 785 1081 IPR023395 -
Cpe17g00683 1475 Gene3D Mitochondrial carrier domain 483 779 IPR023395 -
Cpe17g00683 1475 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 9 386 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe17g00683 1475 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 1086 1474 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe17g00683 1475 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 783 1083 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe17g00683 1475 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 394 782 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe17g00683 1475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 887 980 IPR018108 -
Cpe17g00683 1475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 782 875 IPR018108 -
Cpe17g00683 1475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 585 678 IPR018108 -
Cpe17g00683 1475 PRINTS Mitochondrial carrier protein signature 163 183 IPR002067 GO:0055085
Cpe17g00683 1475 PRINTS Mitochondrial carrier protein signature 266 284 IPR002067 GO:0055085
Cpe17g00683 1475 PRINTS Mitochondrial carrier protein signature 215 233 IPR002067 GO:0055085
Cpe17g00683 1475 PRINTS Mitochondrial carrier protein signature 310 332 IPR002067 GO:0055085
Cpe17g00683 1475 PRINTS Mitochondrial carrier protein signature 100 113 IPR002067 GO:0055085
Cpe17g00683 1475 PRINTS Mitochondrial carrier protein signature 113 127 IPR002067 GO:0055085
Cpe17g00683 1475 SUPERFAMILY Mitochondrial carrier 95 383 IPR023395 -
Cpe17g00683 1475 Pfam Mitochondrial carrier protein 1173 1269 IPR018108 -
Cpe17g00683 1475 Pfam Mitochondrial carrier protein 1379 1463 IPR018108 -
Cpe17g00683 1475 Pfam Mitochondrial carrier protein 96 192 IPR018108 -
Cpe17g00683 1475 Pfam Mitochondrial carrier protein 199 296 IPR018108 -
Cpe17g00683 1475 Pfam Mitochondrial carrier protein 989 1073 IPR018108 -
Cpe17g00683 1475 Pfam Mitochondrial carrier protein 687 771 IPR018108 -
Cpe17g00683 1475 Pfam Mitochondrial carrier protein 481 577 IPR018108 -
Cpe17g00683 1475 Pfam Mitochondrial carrier protein 886 983 IPR018108 -
Cpe17g00683 1475 Pfam Mitochondrial carrier protein 302 383 IPR018108 -
Cpe17g00683 1475 Pfam Mitochondrial carrier protein 784 879 IPR018108 -
Cpe17g00683 1475 Pfam Mitochondrial carrier protein 1276 1373 IPR018108 -
Cpe17g00683 1475 Pfam Mitochondrial carrier protein 584 681 IPR018108 -
Cpe17g00683 1475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 301 387 IPR018108 -
Cpe17g00683 1475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1378 1464 IPR018108 -
Cpe17g00683 1475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1277 1370 IPR018108 -
Cpe17g00683 1475 SUPERFAMILY Mitochondrial carrier 783 1070 IPR023395 -
Cpe17g00683 1475 SUPERFAMILY Mitochondrial carrier 1172 1460 IPR023395 -
Cpe17g00683 1475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 200 293 IPR018108 -
Cpe17g00683 1475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 95 188 IPR018108 -
Cpe17g00683 1475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 988 1074 IPR018108 -
Cpe17g00683 1475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 686 772 IPR018108 -
Cpe17g00683 1475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1172 1265 IPR018108 -
Cpe17g00683 1475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 480 573 IPR018108 -
Cpe17g00683 1475 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 9 386 - -
Cpe17g00683 1475 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 1086 1474 - -
Cpe17g00683 1475 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 783 1083 - -
Cpe17g00683 1475 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 394 782 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00812 Cpe-Chr15:8106468 Cpe17g00683 Cpe-Chr17:5467714 2.91E-168 dispersed
Cpe17g00683 Cpe-Chr17:5467714 Cpe07g00564 Cpe-Chr7:3740229 4.20E-31 dispersed
Cpe17g00683 Cpe-Chr17:5467714 Cpe20g00091 Cpe-Chr20:483199 7.92E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00683 K05863 - csv:101203733 723.005