Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe17g00688 | ATGGAAACAGGAGAATCTGTGGCAAAGGTTATGAAGAACATGGGCCCCCACACCTGTCAAATATGTGGAGATAACGTTGGGAAGACCATTGAGGGTGAAGTGTTTGTTGCTTGTGATGTTTGCACATTTCCTGTTTGCAGACCATGTTATGAGTACGAGAGAAAAGATGGGAATCAGTCTTGTCCTCAATGTAAAAGCAGATACAAGAGACACAAAGCACAAGATCTCCCGCCTCCAAATTATGACAAAGAAGTTTCTTTAAATCACATTCCCTTGCTCACCAATGGGCAGGTTTCCGGAGAACTTTCAGCTGCATCGCCCGAGCATCATTCAATGGCATCACCTGGACATCCTCGTGGGAAGCCGATATATTCTCTTTCTTACGCAGCTGATATCAACCAATCACCTAATGTGCGAGACGTGGACGCTACAAAGGAGTATAATTCATCAGGGCTAGGCAACGTAGCGTGGAAAGAGAGAGTCGATGGCTGGAAGATGAAACAAGAGAAGAATGCTGTTCCAATGAGCACAGCCCATGCTGCATCCGAAAGGGGAGGTGGAGATATCGATGCCTGCACGGATGTGCTTGTCGATGATTCCTTATTAAATGATGAAGCTCGTCAGCCTCTCTCGCGAAAGGTTTCTATTCCATCATCAAGGATAAACCCTTACCGATTGGTGATTGTTCTTCGGCTCGTGATTATTTGCTTTTTCTTGCACTACCGAATAACGAATCCTGTACGTAATGCATACGCTCTATGGCTGGTATCTGTTATATGTGAGATCTGGTTTGCAATATCCTGGATATTAGATCAGTTTCCGAAGTGGTTTCCTGTAAACCGTGAGACATATCTCGATCGGCTTGCATTAAGATATGATAGGGAAGGAGAACCGTCACAGCTTGCTGCCGTTGACATTTTCGTGAGTACAGTTGACCCACTGAAGGAGCCTCCACTTGTCACAGCCAACACTGTGCTATCCATTCTCGCTGTTGACTACCCCGTTGACAAGGTCTCGTGCTATGTCTCTGATGACGGAGCTGCCATGTTGACATTCGAAGCATTATCTGAGACATCAGAGTTTGCAAGATCATGGGTGCCTTTCTGCAAGAAGTACAGCATTGAGCCTCGGGCTCCCGAATGGTACTTCGCTCAGAAAATTGATTACTTGAAGGATAAAGTTCATCCATCGTTTGTCAAAGATCGAAGAGCGATGAAGAGAGACTACGAGGAGTTTAAGGTTCGGATCAACGGCCTGGTATCGAAGGCGCAGAAGGTTCCCGAAGAAGGATGGATTATGCAAGATGGAACGCCATGGCCTGGAAATAATACTAGAGACCATCCAGGAATGATCCAGGTTCGGGTGTCAGCTGTTCTTACGAATGGCCCATTCTTGTTGAATCTCGACTGTGATCACTACATAAACAATAGCAAGGCGTTGAGGGAAGCAATGTGTTTCATGATGGATCCAAACCTAGGAAAATATGTCTGTTATGTTCAGTTTCCTCAAAGATTTGACGGTATCGATAAGAACGATCGATACGCCAACCGTAATACTGTTTTCTTTGATATAAATTTAAGAGGTTTAGATGGTATTCAAGGACCAGTTTATGTGGGTACTGGATGTGTTTTCAATAGAACTGCACTGTATGGTTACGAACCTCCTCTCAAACCGAAGCGTCGGAAACCAGGGGTTCTGTCGTTACTCTGTGGTGGATCGAGAAAGAAAAATTCAAAATCAAGTAAAAAGAGTCCCGACAAGAAGAAGTCGAACAAGCACGTGGACCCGACAGTGCCAATTTTCAATCTCGACGATGTTGAAGAAGTCGTTGAAGCTGTTTTCGTTGCCTCGACCCTTATGGAAAACGGCGGCATTCCTCAATCTGCAACACCTGAATCTCTTCTGAAGGAGGCTATTCATGTTATCAGCTGCGGATACGAAGACAAAACCGACTGGGGATCTGAGATTGGATGGATTTATGGCTCTGTCACTGAAGATATCCTTACAGGATTCAAAATGCATGCTCGTGGTTGGCGGTCGATTTACTGCATACCAAAACGTCCTGCCTTTAAAGGGTCGGCGCCTATCAATCTTTCAGATCGACTAAACCAAGTTCTTCGATGGGCGCTCGGTTCCGTGGAGATTCTTCTGAGTAGGCATTGCCCTATGTGGTATGGCTATGGTGGAAGGCTCAAATGGCTCGAAAGGTTTGCGTATGTAAACACGACAATCTATCCGATCACCGCTGTTCCTCTTCTCATGTACTGTACGTTACCAGCCGTGTGTCTGCTGACAAACAAATTCATTATTCCCCAGATTAGTAACATTGCAAGTATATGGTTTATATCCCTCTTCCTCTCCATCTTCGCAACGGGAATTCTCGAGATGAGATGGAGCGGAGTCGGGATCGACGAGTGGTGGAGAAACGAACAATTCTGGGTGATCGGTGGCGTTTCAGCTCACCTGTTTGCTGTTTTCCAAGGTTTGCTCAAGGTTCTAGCTGGAATCGACACGAACTTCACCGTCACGTCCAAGGCATCGGATGAAGATGGCGACTTCGCCGAGCTTTACTTGTTCAAATGGACAACTCTTCTCATTCCACCAACTACACTCCTTATAGTAAACCTGGTTGGTGTCGTTGCAGGCATATCTTATGCAATCAACAGCGGATACCAATCATGGGGACCGTTGTTTGGCAAGCTATTCTTTGCCTTTTGGGTGATCATCCATCTCTATCCCTTCTTGAAAGGTTTAATGGGTCGTCAAAACAGAACGCCGACCATCGTCGTCGTG | 2793 | 45.72 | METGESVAKVMKNMGPHTCQICGDNVGKTIEGEVFVACDVCTFPVCRPCYEYERKDGNQSCPQCKSRYKRHKAQDLPPPNYDKEVSLNHIPLLTNGQVSGELSAASPEHHSMASPGHPRGKPIYSLSYAADINQSPNVRDVDATKEYNSSGLGNVAWKERVDGWKMKQEKNAVPMSTAHAASERGGGDIDACTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRLVIVLRLVIICFFLHYRITNPVRNAYALWLVSVICEIWFAISWILDQFPKWFPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARSWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVHPSFVKDRRAMKRDYEEFKVRINGLVSKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKYVCYVQFPQRFDGIDKNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKRRKPGVLSLLCGGSRKKNSKSSKKSPDKKKSNKHVDPTVPIFNLDDVEEVVEAVFVASTLMENGGIPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCIPKRPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPMWYGYGGRLKWLERFAYVNTTIYPITAVPLLMYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIVNLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVV | 931 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 5498729 | 5504466 | - | Cp4.1LG17g08020.1 | Cpe17g00688 | 484006 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe17g00688 | 931 | Pfam | Cellulose synthase | 453 | 931 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
Cpe17g00688 | 931 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 2 | 85 | IPR013083 | - | |
Cpe17g00688 | 931 | PANTHER | CELLULOSE SYNTHASE | 125 | 453 | - | - | |
Cpe17g00688 | 931 | PANTHER | CELLULOSE SYNTHASE | 611 | 931 | - | - | |
Cpe17g00688 | 931 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 318 | 777 | IPR029044 | - | |
Cpe17g00688 | 931 | MobiDBLite | consensus disorder prediction | 563 | 595 | - | - | |
Cpe17g00688 | 931 | CDD | mRING-HC-C4C4_CesA_plant | 17 | 67 | - | - | |
Cpe17g00688 | 931 | SUPERFAMILY | RING/U-box | 5 | 75 | - | - | |
Cpe17g00688 | 931 | PANTHER | CELLULOSE SYNTHASE | 6 | 84 | - | - | |
Cpe17g00688 | 931 | PANTHER | CELLULOSE SYNTHASE | 453 | 602 | - | - | |
Cpe17g00688 | 931 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 6 | 84 | - | - | |
Cpe17g00688 | 931 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 125 | 453 | - | - | |
Cpe17g00688 | 931 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 453 | 602 | - | - | |
Cpe17g00688 | 931 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 611 | 931 | - | - | |
Cpe17g00688 | 931 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 382 | 553 | IPR029044 | - | |
Cpe17g00688 | 931 | Pfam | Zinc-binding RING-finger | 9 | 73 | IPR027934 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe10g01182 | Cpe-Chr10:8775512 | Cpe17g00688 | Cpe-Chr17:5498729 | 0 | dispersed | |
Cpe17g00688 | Cpe-Chr17:5498729 | Cpe18g00576 | Cpe-Chr18:6213170 | 0 | dispersed | |
Cpe17g00688 | Cpe-Chr17:5498729 | Cpe19g00060 | Cpe-Chr19:447906 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe17g00688 | K10999 | - | csv:101206590 | 1754.95 |