Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00698 ATGGCGAGGACTAGGGTTCGTGAGCCATCGCGATTGTTAGCTGGTAATACATGCAGGATTCGCCTCAGTGAAATTTTCGGGAGGGCGACCCGGTCTATTTTGGGCTTTTTTCTCATGATGGGTCTTTGCAATGGCGTGCATTACCTTTTTAGGCCTTTTTCTCAACCTCGTATTAGCTCTGATACGATCGTAGGTTTGGTTGTTGGGAACTTCATAAGGAAACAACTCGATTTATCAACGCTTAAGACGCTGCGTTATATCGTTGACTTTGGTATGATATGCTATATGTTCTCGCTGGGTTTGGAGATGGATCCATACATACTCTTCAAAGCACCTACACGTGATGCTAAAGTAGCTTACGCCGGGATGATTTCGACACTGGTCTTAGCCTGTTCCATAACCCCATTTATCAGTTTTTCAAAGACAAAAGAGATCAGTTTCATCCTCTCCCTCTCAATTGTCCTCTCTAGCACAGCTTCTCCTGTGCTAACCCGTTTGATCACCCGTCTTAAAATAGGCAAGTCGGATATAGGTCGACTTGTTATTGCTGCTGGGATGCATTCTGATTTTATATCCACTCTCATTATCTGTATTGGTTATCTCTTTTGCAAATGTCAAGAGGTACGCCTCTCCACGACACGAGGTTTTCAATTAGGTTTTGTGTTATTGATACAGATGATAGTCGCAGCAAAGGTTTCGCCTGTATTTATGAACTGGGTTAATAACGAAAACCCCGAGGGTAAACCTATGAAAGGTCCTCACCTGGTTCTTGCAGTTGCTTTCATGGCCTTCCTTTGCAGCTGCCCTACTATACTCGGTTACAATCCGATTCTCAGTGCATTCTTAGCGGGAACGTTTTTACCTCGAGAAGGTCGAGTATCGAGATGGGCCATTGGCAAAATTAACTACCTGCTTAGTACCGTTTTCTATCCCATCTTCTTCTTTTGGATGGGGGCTGAATCCAAGTGGAGCGACTTTGAACCTGGACAAATAATGACATGGGTCAGGTTGATTCTTCTTTTTGTCATTGCAACCGTAGGAAAAGTTGTTGGTACTGTGATTGCTGGGGCAATTTTGGGGTTTCATTGGCCTGAATCAAACACTGCAGCAGCCATTAACATCATGGAGATTTCTCGGGGGATGGCTAAACCTGGAGTTGTTGTATATCTCACAGACATGATTGAACTTACAGATGAAATAGCAGCCACATTAGTGCAGGTTGAAGGAGAGGACACCCTGACTGTAACTCACGCGGGAGTGAGACAAATGAGAGACCAAATTACTGCTGTGGTTCAGAGCTATGTAGACGAAAATGGAGACGGAATTACACTTGGAAGAATGCTAGCTCTCTCAGCATTCAATTCTATGGCTCAGGACATATGCATTTTGGCTGAGGAATTGATGGGAGCTCTTATCATACTGCCATTTCACAAGAGCCAGCGTGCTGATGGGTCTTTGAGTGAGGGCAATGCGGGTTTTCGCTACGTCAACCGCAAGGTTCTCAGGAATGCCCCATGCTCTGTGGGAATCCTAGTGGATCGAGGTCTTGGAACAGTAGAGAAAATTTCGAGATCGTATGCATCTCTGAATGTGGCAGTCATCTTCATCAGCGGTAAAGATGACCGAGAAGCATTAGCGTATGCAGCTCGAGTAGCAAGGCATCCTGGAGTTAAACTCTCTGTGATTAGATTCTTGGTGGATGCTGCTGCAGAGAATGCTGCAAGAAGAGCTGGGACCTACAGGATAAGTGTTGCTGAGCAGGAAGAGGAAATGAGACTAGACGATGAATGTTTTGCTACTTTTTACGAACGACACGTGGCTGGTGGGCACGTTGCTTATGTCGAAAAGCACCTTGCGAGTTCTGCGGAGACATATTCTACATTGAAATTACTGGAAGGGCAATATGCACTCATAATCGTCGGTCGAGGTGGGAAGGTGAACACGGTGTTAACTTTTGGGATGAATGACTGGCAACAATGTCCAGAACTTGGTCCTATAGGGGATGTTCTTTCGGGGTCTGAATTCTCTGTTAGGACCTCGGTTTTAGTCATCCAACAACACAATCTAAAAGGAGAACTAGATGGACTTGATGATGATTTTTCTATTATGGAGATGTCAAGAAACCGATGA 2130 44.84 MARTRVREPSRLLAGNTCRIRLSEIFGRATRSILGFFLMMGLCNGVHYLFRPFSQPRISSDTIVGLVVGNFIRKQLDLSTLKTLRYIVDFGMICYMFSLGLEMDPYILFKAPTRDAKVAYAGMISTLVLACSITPFISFSKTKEISFILSLSIVLSSTASPVLTRLITRLKIGKSDIGRLVIAAGMHSDFISTLIICIGYLFCKCQEVRLSTTRGFQLGFVLLIQMIVAAKVSPVFMNWVNNENPEGKPMKGPHLVLAVAFMAFLCSCPTILGYNPILSAFLAGTFLPREGRVSRWAIGKINYLLSTVFYPIFFFWMGAESKWSDFEPGQIMTWVRLILLFVIATVGKVVGTVIAGAILGFHWPESNTAAAINIMEISRGMAKPGVVVYLTDMIELTDEIAATLVQVEGEDTLTVTHAGVRQMRDQITAVVQSYVDENGDGITLGRMLALSAFNSMAQDICILAEELMGALIILPFHKSQRADGSLSEGNAGFRYVNRKVLRNAPCSVGILVDRGLGTVEKISRSYASLNVAVIFISGKDDREALAYAARVARHPGVKLSVIRFLVDAAAENAARRAGTYRISVAEQEEEMRLDDECFATFYERHVAGGHVAYVEKHLASSAETYSTLKLLEGQYALIIVGRGGKVNTVLTFGMNDWQQCPELGPIGDVLSGSEFSVRTSVLVIQQHNLKGELDGLDDDFSIMEMSRNR 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 5553126 5557634 - Cp4.1LG17g07980.1 Cpe17g00698 484016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00698 709 PANTHER CATION/H(+) ANTIPORTER 28 367 700 - -
Cpe17g00698 709 Gene3D - 29 397 IPR038770 -
Cpe17g00698 709 PANTHER CATION/H + ANTIPORTER 367 700 - -
Cpe17g00698 709 Pfam Sodium/hydrogen exchanger family 43 371 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cpe17g00698 709 PANTHER CATION/H + ANTIPORTER 22 366 - -
Cpe17g00698 709 PANTHER CATION/H(+) ANTIPORTER 28 22 366 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g00834 Cpe17g00698 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe17g00698 Cpe-Chr17:5553126 Cpe16g00093 Cpe-Chr16:1768499 1.52E-77 dispersed
Cpe12g00834 Cpe-Chr12:7403559 Cpe17g00698 Cpe-Chr17:5553126 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00698 - - csv:101211645 640.573