Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00713 ATGGTGAACGTTCCCAAGACGAAGAAGACTTACTGCAAGAGCAAGGAATGCAAAAAGCATACCCTGCACAAGGTTACCCAGTACAAAAAGGGTAAGGACAGTCTTGCTGCCCAAGGAAAGCGTCGTTATGATCGTAAACAATCAGGATACGGAGGCCAGACCAAGCCCGTCTTTCACAAGAAGGCAAAAACTACCAAGAAGATTGTGCTGAGGTTGCAATGCCAGGGTTGCAAGCATGTGTCACAGCATGCCATTAAGAGATGCAAGCATTTTGAGATTGGTGGAGACAAGAAGGGAAAGGGAACTTCACTTTTTTAG 318 45.91 MVNVPKTKKTYCKSKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 105
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 5675047 5676774 + Cp4.1LG17g07830.1 Cpe17g00713 484031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00713 105 ProSitePatterns Ribosomal protein L44e signature. 63 74 IPR000552 GO:0003735|GO:0005840|GO:0006412
Cpe17g00713 105 Pfam Ribosomal protein L44 19 94 IPR000552 GO:0003735|GO:0005840|GO:0006412
Cpe17g00713 105 PANTHER 60S RIBOSOMAL PROTEIN L44-LIKE 2 105 - -
Cpe17g00713 105 Gene3D - 1 105 - -
Cpe17g00713 105 SUPERFAMILY Zn-binding ribosomal proteins 2 94 IPR011332 GO:0006412
Cpe17g00713 105 MobiDBLite consensus disorder prediction 28 57 - -
Cpe17g00713 105 MobiDBLite consensus disorder prediction 28 48 - -
Cpe17g00713 105 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 2 105 IPR000552 GO:0003735|GO:0005840|GO:0006412
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01195 Cpe17g00713 CCT
Cpe12g00853 Cpe17g00713 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00853 Cpe-Chr12:7519593 Cpe17g00713 Cpe-Chr17:5675047 4.70E-71 wgd
Cpe17g00713 Cpe-Chr17:5675047 Cpe02g01558 Cpe-Chr2:13212320 3.50E-70 wgd
Cpe17g00713 Cpe-Chr17:5675047 Cpe03g00837 Cpe-Chr3:5268019 8.66E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00713 K02929 - ini:109148838 214.927