Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe17g00726 | ATGAAGCCAAGTGTCGATGAGGAAACGTTAACGTGGCTTCACAGGCAAGTCTCTGTAACGGCGTTACGTGCTCCGTCTCCTTCCACGAATTTACTCCCTCCCGCGGCGGCTCCCACTATATATCCCTTCTTCATTGCCGACTTCTTTATTACTGAAATTTCCTCATATCATTATTCTCAAATTTCCATAGCAGAGAGAGAGAAAAATCCGATTCCAACTCCAACTTACATTTCTGCAGATTATAGCGATTTTGATCTCTCAGTTGAAGAATCTGATTTTTTGGTAAATGTAAAAATGGTGGCTGAAACTAAGGTTGTTGTGTGTTCGAAGAGCCTCCCTGTTTTGGAGGTCCCTTATTTCGGTAAAGAGGCTCATCTTGTTGATGAAATGAAGTCCATCGACGGTGCGATTCCCGTTGATCCGACTCTCGATCGTGTTCGCGCTTCCGAATCGGTTTGTTCGAGTTCTCAATCGGATGTGAAGCAAATTCCAGATACCGACGTCGATTCGATGGAGCAGAGGGAATTTCCAAGTCTCCGGTCGGGGAGCTTTGCTGATATTGGACCTAGGAGAGACATGGAGGATGAACACATAAGGATTGACGATCTGTGTTCACAGTTAGGCTCGCTCTTTAAGTTTTCTAAGCCAAGTGGTTTCTATGGGGTGTTTGATGGACATGGAGGACCTGAAGCAGCAGCTTATATAAGAAAGAATATTCTTAGACTCTTTTTTGAAGATGTTAGGTTTCCTCACATGCCTGATGTTGATGAACTCCGGCCGGAGGAGATTGAAAATTTCTTACGAGAAGCATTTCTTCTGGCCGATCAAGCTTTGGCCGATGATTCTGGTATTAGTAATTTGTCTGGGACGACGGCCCTCACTGCTCTTGTGCTTGGAAGGCTTCTAATGGTGGCTAATGTTGGAGATTGCCGGGCTGTTCTTAGTCGGAAGGGAGAGGCAGTAGATATGTCTCAAGACCACAGGCCAATTTATTCACCGGAGAAGGAACGAGTAGAAGAGTTGGGTGGCTTCGTCGACGGTGGCTATCTTAACGGCCTTTTATCAGTTTCCAGAGCCTTGGGGGATTGGGACATGAAGCTCCTCCCCCATGGTTCTCCTTCACCCCTCATTGCAGAACCAGAATGCAGGCAGGTGGTTCTAACAGAGGAGGATGAGTTCTTAATCATAGCCTGCGACGGGATTTGGGACGTGATGTCGAGCCAACATGCAGTCGATGTAGTTCGCCGGGGACTTCAGCGACATGACAACCCTGAGCGTTGCGCTCGAGATCTCGTCCTGCGGGCTTTGGGACTAGACTCATTCGATAATCTCACCGTTGTTATTGTTTGCTTCTCTAGTTTCCATAGGGACAACTCTCCACAACCACAGCAACGAAAATTGAGATACTGCAGCCTCTCTGCTCAAGCCCTTTGTAGCTTGCAGAGATCGTTGGATAAGAGTGGATGCCAATGA | 1473 | 47.11 | MKPSVDEETLTWLHRQVSVTALRAPSPSTNLLPPAAAPTIYPFFIADFFITEISSYHYSQISIAEREKNPIPTPTYISADYSDFDLSVEESDFLVNVKMVAETKVVVCSKSLPVLEVPYFGKEAHLVDEMKSIDGAIPVDPTLDRVRASESVCSSSQSDVKQIPDTDVDSMEQREFPSLRSGSFADIGPRRDMEDEHIRIDDLCSQLGSLFKFSKPSGFYGVFDGHGGPEAAAYIRKNILRLFFEDVRFPHMPDVDELRPEEIENFLREAFLLADQALADDSGISNLSGTTALTALVLGRLLMVANVGDCRAVLSRKGEAVDMSQDHRPIYSPEKERVEELGGFVDGGYLNGLLSVSRALGDWDMKLLPHGSPSPLIAEPECRQVVLTEEDEFLIIACDGIWDVMSSQHAVDVVRRGLQRHDNPERCARDLVLRALGLDSFDNLTVVIVCFSSFHRDNSPQPQQRKLRYCSLSAQALCSLQRSLDKSGCQ | 490 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 5769558 | 5772535 | - | Cp4.1LG17g07610.1 | Cpe17g00726 | 484044 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe17g00726 | 490 | SMART | PP2C_4 | 170 | 449 | IPR001932 | - | |
Cpe17g00726 | 490 | CDD | PP2Cc | 180 | 451 | IPR001932 | - | |
Cpe17g00726 | 490 | ProSitePatterns | PPM-type phosphatase domain signature. | 219 | 227 | IPR000222 | GO:0043169 | |
Cpe17g00726 | 490 | Pfam | Protein phosphatase 2C | 190 | 442 | IPR001932 | - | |
Cpe17g00726 | 490 | ProSiteProfiles | PPM-type phosphatase domain profile. | 180 | 451 | IPR001932 | - | |
Cpe17g00726 | 490 | SMART | PP2C_SIG_2 | 195 | 451 | IPR001932 | - | |
Cpe17g00726 | 490 | PANTHER | PROTEIN PHOSPHATASE 2C 49-RELATED | 99 | 470 | - | - | |
Cpe17g00726 | 490 | PANTHER | PROTEIN PHOSPHATASE 2C | 99 | 470 | IPR015655 | GO:0004722|GO:0006470 | |
Cpe17g00726 | 490 | SUPERFAMILY | PP2C-like | 173 | 453 | IPR036457 | - | |
Cpe17g00726 | 490 | Gene3D | - | 159 | 458 | IPR036457 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe12g00869 | Cpe17g00726 | CCT | |
Cpe12g00869 | Cpe17g00726 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00026 | Cpe-Chr2:140957 | Cpe17g00726 | Cpe-Chr17:5769558 | 5.08E-99 | dispersed | |
Cpe06g00012 | Cpe-Chr6:44878 | Cpe17g00726 | Cpe-Chr17:5769558 | 4.37E-102 | dispersed | |
Cpe07g01145 | Cpe-Chr7:10019791 | Cpe17g00726 | Cpe-Chr17:5769558 | 3.21E-56 | dispersed | |
Cpe11g01025 | Cpe-Chr11:8632574 | Cpe17g00726 | Cpe-Chr17:5769558 | 2.80E-06 | dispersed | |
Cpe17g00726 | Cpe-Chr17:5769558 | Cpe14g00210 | Cpe-Chr14:1175110 | 6.30E-39 | dispersed | |
Cpe12g00869 | Cpe-Chr12:7607690 | Cpe17g00726 | Cpe-Chr17:5769558 | 0 | wgd | |
Cpe17g00084 | Cpe-Chr17:475767 | Cpe17g00726 | Cpe-Chr17:5769558 | 3.73E-113 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe17g00726 | K14803 | - | csv:101216626 | 632.869 |