Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe17g00770 | ATGATAAGCGTAGAATCTAGTGGAGATGAGGGCAATCCTATCCCGGTTTACAAAATCCGGTTGGGGCCAGTTCTAACCCGGGTCAAAATCTTACTCCAGCTAGGGTTTTCCCGAAATCCACAAACCAGTTTCCCATCGGCTTATCCAGGAAAATCTCATCCCCAAAATTCCCATTCCTCTCCAACACTTACCGAAGCTCCATCCTCGGCTCTCACTCTCAAGACACGGAATAGTAACGATCGGCTTAGAACAGTTTGGACGCCTGAAATGGATAGATATTTCATAGACCTTATGTTGGAACAAGTTAACAAAGGGAACAGATTTGACGAGCATTTGTTCAGTAAACGAGCGTGGAGATTTATGATCTCTCTGTTCAATGCAAAATTCAAATTCGAGTATGAAAAGGATGTTTTGAAGAATCGACATAAAACGTTGAGGAATCTGTTCAAAGCTGTGAAGAATCTCCTTGATCAGAGGGGTTTCAGCTGGGACGAAGTGCGGCAAATGGTGACTGCTGAGAATCATGTCTGGGATGAATATGTTAAGGAACACCCCGAGGCACGATCTTTTAGAATTAAGAGCATCCCATATTACAATGATCTGTGTATAATATATGGAGGCGCGACAGTCGGACAAAAAGGGATCTATTCGCAGGAGTCGTCTCATTCAGGTGATAATGAGACGATGTATACGAAGCCGCTGGGGACAGCCAGTGAGGGAGATGTTGAAGCACTTAATGGAATCATGATCGGTGAAGACTATAAAATCTCTGTGTCTGGAGATGTTGATGAGCTACCACAAATGTCAACTACAGCAACCACAGCCATTTCTCGTTCCCGAACGTATTGGCAGCCTCCTATGGACAGATTCTTCATAGACCTTATGTTGGAGCAAGTGCAGAAAGGCAACCAAATAGATGGGATTTTTCGGAAACACTCGTGGGCTGAGATGATTGCATCATTCAATGCTAAGTTTGGTTTCAATTATGATGTGGATGTATTGAAGAATAGGTATAAAACTCTGAGGAGGCAGTATAATGTCATAAAGAATCTATTAGACTTGGACGGATTTCTCTGGGACGAGACACGTCAAATGATTACCGCTGACGATTACATTTGGCAAGACTATATCAAGGCACATACAGACGCTCGACAATTCATGACACGGCCAGTGCCATATTATAAGGATCTGTGTGTGATCTGCGATCCGAGTTTTGACGAAAGAGAGTGCTCTCCAGGACAAGGTATAGAGCAGCACCACGACGCCGAGGACGGAAAACTTTCAATAGGTTTCCAGTCTCCTATTACATCAGTTTCAAGTGAAGAACAAGCAAGCGAGAAGGAATCAACACATTTAGGTCCAAAGAACAAGAGGGAATTAGAAAGCATGTCTAGTTTTGATCATAACAAGAAGCTAAGAGGTGAAGATGAGAGCATGGCGAGTGCCCTTCGAGAGATGGCAAGCTTCGTTTCTTCCTTATCAGACAAGAAGAAAAACGACGATAACTCGAGTTCCATCTCGATTGAGACAGTAATTGAAGCTATCCAAGCATTGCCAAACATGGATGAGGACCTTGTATTGGATGCTTGTGATCTCCTTGAGGATGAAAAGAAGGCAAAAACGTTTATCGCGTTGGATGTCAAATTACGACGAAAGTGGTTGATACGAAAACTTCGACCCGAGGGGGCAGACCAAAATGGAATTGAATGGCTGAAATCAGATTTCATTTCAGGACCCATTTGCGGCGAGTCGTCTCGTCGGGCCGCAACCGGGGCTCTTCTCTGTAATGCTGGAGCTGGTGCCGCTGCTGGAGTTCTTGCTGCTACGTTTGTGTGCCCTTTGGATGTTATCAAGACTAGATTTCAGGTTCATGGACTGCCAAACATTGGAAAAGGGAGTCTCATACTTGGTAGTCTGAAACAAATTGCTCATGCGGAGGGGCTGCGTGGAATGTATAGAGGACTCTCACCTACTGTGCTTGCACTACTTCCTAACTGGGCTCTTTCAATAGGTGCTAATATGTTGGCTGCTTCTGGTGCTGGGGCTGCTACAGCTATTGCAACTAATCCTCTATGGGTTGTTAAGACCAGACTTCAGGGAATGAAATCTGGTGTCCTACCGTATAGAAACACAGTTTCTGCCTTGAAGAGAATAGCCTATGAAGAAGGCATCCGTGGATTGTACAGTGGTCTTGTGCCTGCTCTGGCTGGTGTTAGTCACGTCGCGATCCAGTTTCCGACATATGAGAAAATAAAAGGCTATTTGGCTAGCAGAGATAATACGACGACGGATAAACTCTCCGCACGTGACGTTGCAGTCGCCTCATCTGTCTCCAAGATATTCGCGTCCACATTGACTTATCCACATGAGGTTGTACGTTCCAGGCTTCAGGAACAAGGGTTCCACTCCGAGAAGCGTTATTCGGGCGTAACCGATTGCGTAAAGAAAGTGTTTCAGCAAGATGGTCTCCCCGGTTTCTATCGAGGGTGCGCAGCCAACCTTCTTAGGACGACGCCTGCAGCTGCCATCACATTTACCAGCTTTGAAATGATCCACCGTTCTCTTCTCAACTTATTTCCTTCTGATCCACACCAACACACATTATGA | 2607 | 45.19 | MISVESSGDEGNPIPVYKIRLGPVLTRVKILLQLGFSRNPQTSFPSAYPGKSHPQNSHSSPTLTEAPSSALTLKTRNSNDRLRTVWTPEMDRYFIDLMLEQVNKGNRFDEHLFSKRAWRFMISLFNAKFKFEYEKDVLKNRHKTLRNLFKAVKNLLDQRGFSWDEVRQMVTAENHVWDEYVKEHPEARSFRIKSIPYYNDLCIIYGGATVGQKGIYSQESSHSGDNETMYTKPLGTASEGDVEALNGIMIGEDYKISVSGDVDELPQMSTTATTAISRSRTYWQPPMDRFFIDLMLEQVQKGNQIDGIFRKHSWAEMIASFNAKFGFNYDVDVLKNRYKTLRRQYNVIKNLLDLDGFLWDETRQMITADDYIWQDYIKAHTDARQFMTRPVPYYKDLCVICDPSFDERECSPGQGIEQHHDAEDGKLSIGFQSPITSVSSEEQASEKESTHLGPKNKRELESMSSFDHNKKLRGEDESMASALREMASFVSSLSDKKKNDDNSSSISIETVIEAIQALPNMDEDLVLDACDLLEDEKKAKTFIALDVKLRRKWLIRKLRPEGADQNGIEWLKSDFISGPICGESSRRAATGALLCNAGAGAAAGVLAATFVCPLDVIKTRFQVHGLPNIGKGSLILGSLKQIAHAEGLRGMYRGLSPTVLALLPNWALSIGANMLAASGAGAATAIATNPLWVVKTRLQGMKSGVLPYRNTVSALKRIAYEEGIRGLYSGLVPALAGVSHVAIQFPTYEKIKGYLASRDNTTTDKLSARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGFHSEKRYSGVTDCVKKVFQQDGLPGFYRGCAANLLRTTPAAAITFTSFEMIHRSLLNLFPSDPHQHTL | 868 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 6061544 | 6068956 | + | Cp4.1LG17g07390.1 | Cpe17g00770 | 484088 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe17g00770 | 868 | Coils | Coil | 331 | 351 | - | - | |
Cpe17g00770 | 868 | MobiDBLite | consensus disorder prediction | 43 | 68 | - | - | |
Cpe17g00770 | 868 | Pfam | Mitochondrial carrier protein | 772 | 856 | IPR018108 | - | |
Cpe17g00770 | 868 | Pfam | Mitochondrial carrier protein | 596 | 671 | IPR018108 | - | |
Cpe17g00770 | 868 | Pfam | Mitochondrial carrier protein | 669 | 756 | IPR018108 | - | |
Cpe17g00770 | 868 | PANTHER | EXPRESSED PROTEIN | 60 | 227 | - | - | |
Cpe17g00770 | 868 | MobiDBLite | consensus disorder prediction | 437 | 472 | - | - | |
Cpe17g00770 | 868 | Gene3D | Mitochondrial carrier domain | 671 | 857 | IPR023395 | - | |
Cpe17g00770 | 868 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 591 | 660 | IPR018108 | - | |
Cpe17g00770 | 868 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 766 | 854 | IPR018108 | - | |
Cpe17g00770 | 868 | PANTHER | EXPRESSED PROTEIN | 444 | 560 | - | - | |
Cpe17g00770 | 868 | Pfam | Myb/SANT-like DNA-binding domain | 86 | 180 | IPR024752 | - | |
Cpe17g00770 | 868 | Pfam | Myb/SANT-like DNA-binding domain | 282 | 376 | IPR024752 | - | |
Cpe17g00770 | 868 | MobiDBLite | consensus disorder prediction | 444 | 472 | - | - | |
Cpe17g00770 | 868 | PANTHER | MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN | 260 | 421 | - | - | |
Cpe17g00770 | 868 | PANTHER | MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN | 444 | 560 | - | - | |
Cpe17g00770 | 868 | SUPERFAMILY | Mitochondrial carrier | 595 | 850 | IPR023395 | - | |
Cpe17g00770 | 868 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 668 | 754 | IPR018108 | - | |
Cpe17g00770 | 868 | PANTHER | MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN | 60 | 227 | - | - | |
Cpe17g00770 | 868 | PANTHER | EXPRESSED PROTEIN | 260 | 421 | - | - | |
Cpe17g00770 | 868 | Gene3D | Mitochondrial carrier domain | 567 | 670 | IPR023395 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe12g00913 | Cpe17g00770 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe13g00396 | Cpe-Chr13:4303424 | Cpe17g00770 | Cpe-Chr17:6061544 | 9.53E-94 | dispersed | |
Cpe17g00770 | Cpe-Chr17:6061544 | Cpe11g00333 | Cpe-Chr11:1772571 | 2.58E-09 | dispersed | |
Cpe06g00286 | Cpe-Chr6:1565517 | Cpe17g00770 | Cpe-Chr17:6061544 | 3.42E-39 | transposed | |
Cpe13g00726 | Cpe-Chr13:6682834 | Cpe17g00770 | Cpe-Chr17:6061544 | 3.03E-15 | transposed | |
Cpe12g00913 | Cpe-Chr12:7892461 | Cpe17g00770 | Cpe-Chr17:6061544 | 9.38E-162 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe17g00770 | - | - | cmos:111460726 | 964.14 |