Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00770 ATGATAAGCGTAGAATCTAGTGGAGATGAGGGCAATCCTATCCCGGTTTACAAAATCCGGTTGGGGCCAGTTCTAACCCGGGTCAAAATCTTACTCCAGCTAGGGTTTTCCCGAAATCCACAAACCAGTTTCCCATCGGCTTATCCAGGAAAATCTCATCCCCAAAATTCCCATTCCTCTCCAACACTTACCGAAGCTCCATCCTCGGCTCTCACTCTCAAGACACGGAATAGTAACGATCGGCTTAGAACAGTTTGGACGCCTGAAATGGATAGATATTTCATAGACCTTATGTTGGAACAAGTTAACAAAGGGAACAGATTTGACGAGCATTTGTTCAGTAAACGAGCGTGGAGATTTATGATCTCTCTGTTCAATGCAAAATTCAAATTCGAGTATGAAAAGGATGTTTTGAAGAATCGACATAAAACGTTGAGGAATCTGTTCAAAGCTGTGAAGAATCTCCTTGATCAGAGGGGTTTCAGCTGGGACGAAGTGCGGCAAATGGTGACTGCTGAGAATCATGTCTGGGATGAATATGTTAAGGAACACCCCGAGGCACGATCTTTTAGAATTAAGAGCATCCCATATTACAATGATCTGTGTATAATATATGGAGGCGCGACAGTCGGACAAAAAGGGATCTATTCGCAGGAGTCGTCTCATTCAGGTGATAATGAGACGATGTATACGAAGCCGCTGGGGACAGCCAGTGAGGGAGATGTTGAAGCACTTAATGGAATCATGATCGGTGAAGACTATAAAATCTCTGTGTCTGGAGATGTTGATGAGCTACCACAAATGTCAACTACAGCAACCACAGCCATTTCTCGTTCCCGAACGTATTGGCAGCCTCCTATGGACAGATTCTTCATAGACCTTATGTTGGAGCAAGTGCAGAAAGGCAACCAAATAGATGGGATTTTTCGGAAACACTCGTGGGCTGAGATGATTGCATCATTCAATGCTAAGTTTGGTTTCAATTATGATGTGGATGTATTGAAGAATAGGTATAAAACTCTGAGGAGGCAGTATAATGTCATAAAGAATCTATTAGACTTGGACGGATTTCTCTGGGACGAGACACGTCAAATGATTACCGCTGACGATTACATTTGGCAAGACTATATCAAGGCACATACAGACGCTCGACAATTCATGACACGGCCAGTGCCATATTATAAGGATCTGTGTGTGATCTGCGATCCGAGTTTTGACGAAAGAGAGTGCTCTCCAGGACAAGGTATAGAGCAGCACCACGACGCCGAGGACGGAAAACTTTCAATAGGTTTCCAGTCTCCTATTACATCAGTTTCAAGTGAAGAACAAGCAAGCGAGAAGGAATCAACACATTTAGGTCCAAAGAACAAGAGGGAATTAGAAAGCATGTCTAGTTTTGATCATAACAAGAAGCTAAGAGGTGAAGATGAGAGCATGGCGAGTGCCCTTCGAGAGATGGCAAGCTTCGTTTCTTCCTTATCAGACAAGAAGAAAAACGACGATAACTCGAGTTCCATCTCGATTGAGACAGTAATTGAAGCTATCCAAGCATTGCCAAACATGGATGAGGACCTTGTATTGGATGCTTGTGATCTCCTTGAGGATGAAAAGAAGGCAAAAACGTTTATCGCGTTGGATGTCAAATTACGACGAAAGTGGTTGATACGAAAACTTCGACCCGAGGGGGCAGACCAAAATGGAATTGAATGGCTGAAATCAGATTTCATTTCAGGACCCATTTGCGGCGAGTCGTCTCGTCGGGCCGCAACCGGGGCTCTTCTCTGTAATGCTGGAGCTGGTGCCGCTGCTGGAGTTCTTGCTGCTACGTTTGTGTGCCCTTTGGATGTTATCAAGACTAGATTTCAGGTTCATGGACTGCCAAACATTGGAAAAGGGAGTCTCATACTTGGTAGTCTGAAACAAATTGCTCATGCGGAGGGGCTGCGTGGAATGTATAGAGGACTCTCACCTACTGTGCTTGCACTACTTCCTAACTGGGCTCTTTCAATAGGTGCTAATATGTTGGCTGCTTCTGGTGCTGGGGCTGCTACAGCTATTGCAACTAATCCTCTATGGGTTGTTAAGACCAGACTTCAGGGAATGAAATCTGGTGTCCTACCGTATAGAAACACAGTTTCTGCCTTGAAGAGAATAGCCTATGAAGAAGGCATCCGTGGATTGTACAGTGGTCTTGTGCCTGCTCTGGCTGGTGTTAGTCACGTCGCGATCCAGTTTCCGACATATGAGAAAATAAAAGGCTATTTGGCTAGCAGAGATAATACGACGACGGATAAACTCTCCGCACGTGACGTTGCAGTCGCCTCATCTGTCTCCAAGATATTCGCGTCCACATTGACTTATCCACATGAGGTTGTACGTTCCAGGCTTCAGGAACAAGGGTTCCACTCCGAGAAGCGTTATTCGGGCGTAACCGATTGCGTAAAGAAAGTGTTTCAGCAAGATGGTCTCCCCGGTTTCTATCGAGGGTGCGCAGCCAACCTTCTTAGGACGACGCCTGCAGCTGCCATCACATTTACCAGCTTTGAAATGATCCACCGTTCTCTTCTCAACTTATTTCCTTCTGATCCACACCAACACACATTATGA 2607 45.19 MISVESSGDEGNPIPVYKIRLGPVLTRVKILLQLGFSRNPQTSFPSAYPGKSHPQNSHSSPTLTEAPSSALTLKTRNSNDRLRTVWTPEMDRYFIDLMLEQVNKGNRFDEHLFSKRAWRFMISLFNAKFKFEYEKDVLKNRHKTLRNLFKAVKNLLDQRGFSWDEVRQMVTAENHVWDEYVKEHPEARSFRIKSIPYYNDLCIIYGGATVGQKGIYSQESSHSGDNETMYTKPLGTASEGDVEALNGIMIGEDYKISVSGDVDELPQMSTTATTAISRSRTYWQPPMDRFFIDLMLEQVQKGNQIDGIFRKHSWAEMIASFNAKFGFNYDVDVLKNRYKTLRRQYNVIKNLLDLDGFLWDETRQMITADDYIWQDYIKAHTDARQFMTRPVPYYKDLCVICDPSFDERECSPGQGIEQHHDAEDGKLSIGFQSPITSVSSEEQASEKESTHLGPKNKRELESMSSFDHNKKLRGEDESMASALREMASFVSSLSDKKKNDDNSSSISIETVIEAIQALPNMDEDLVLDACDLLEDEKKAKTFIALDVKLRRKWLIRKLRPEGADQNGIEWLKSDFISGPICGESSRRAATGALLCNAGAGAAAGVLAATFVCPLDVIKTRFQVHGLPNIGKGSLILGSLKQIAHAEGLRGMYRGLSPTVLALLPNWALSIGANMLAASGAGAATAIATNPLWVVKTRLQGMKSGVLPYRNTVSALKRIAYEEGIRGLYSGLVPALAGVSHVAIQFPTYEKIKGYLASRDNTTTDKLSARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGFHSEKRYSGVTDCVKKVFQQDGLPGFYRGCAANLLRTTPAAAITFTSFEMIHRSLLNLFPSDPHQHTL 868
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6061544 6068956 + Cp4.1LG17g07390.1 Cpe17g00770 484088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00770 868 Coils Coil 331 351 - -
Cpe17g00770 868 MobiDBLite consensus disorder prediction 43 68 - -
Cpe17g00770 868 Pfam Mitochondrial carrier protein 772 856 IPR018108 -
Cpe17g00770 868 Pfam Mitochondrial carrier protein 596 671 IPR018108 -
Cpe17g00770 868 Pfam Mitochondrial carrier protein 669 756 IPR018108 -
Cpe17g00770 868 PANTHER EXPRESSED PROTEIN 60 227 - -
Cpe17g00770 868 MobiDBLite consensus disorder prediction 437 472 - -
Cpe17g00770 868 Gene3D Mitochondrial carrier domain 671 857 IPR023395 -
Cpe17g00770 868 ProSiteProfiles Solute carrier (Solcar) repeat profile. 591 660 IPR018108 -
Cpe17g00770 868 ProSiteProfiles Solute carrier (Solcar) repeat profile. 766 854 IPR018108 -
Cpe17g00770 868 PANTHER EXPRESSED PROTEIN 444 560 - -
Cpe17g00770 868 Pfam Myb/SANT-like DNA-binding domain 86 180 IPR024752 -
Cpe17g00770 868 Pfam Myb/SANT-like DNA-binding domain 282 376 IPR024752 -
Cpe17g00770 868 MobiDBLite consensus disorder prediction 444 472 - -
Cpe17g00770 868 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 260 421 - -
Cpe17g00770 868 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 444 560 - -
Cpe17g00770 868 SUPERFAMILY Mitochondrial carrier 595 850 IPR023395 -
Cpe17g00770 868 ProSiteProfiles Solute carrier (Solcar) repeat profile. 668 754 IPR018108 -
Cpe17g00770 868 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 60 227 - -
Cpe17g00770 868 PANTHER EXPRESSED PROTEIN 260 421 - -
Cpe17g00770 868 Gene3D Mitochondrial carrier domain 567 670 IPR023395 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g00913 Cpe17g00770 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe13g00396 Cpe-Chr13:4303424 Cpe17g00770 Cpe-Chr17:6061544 9.53E-94 dispersed
Cpe17g00770 Cpe-Chr17:6061544 Cpe11g00333 Cpe-Chr11:1772571 2.58E-09 dispersed
Cpe06g00286 Cpe-Chr6:1565517 Cpe17g00770 Cpe-Chr17:6061544 3.42E-39 transposed
Cpe13g00726 Cpe-Chr13:6682834 Cpe17g00770 Cpe-Chr17:6061544 3.03E-15 transposed
Cpe12g00913 Cpe-Chr12:7892461 Cpe17g00770 Cpe-Chr17:6061544 9.38E-162 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00770 - - cmos:111460726 964.14