Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00772 ATGGCGGCCACCACATTCTCCTCTCTCATCCTCCTCTCCCTCTACATAACCACCGCTCAAATTCCCCTCTCCGCCGCCTCCGCCTCCGTCTGCACCTCCACCCCCGACCCCTCCTACTGCAAATCCACCCTCCCCAACCAAACCGGCAATGTGTATTCATACGGCCGCTCATCTTTCAGAAAATCCCTCTCATCCTCGCAAAAGTTTCTCCGGCTAGTCAAAAAGTACCTCCGGTCACGGTCGTCGTTGACGGTCCCCGCCGTCCGAGCACTGGAGGACTGCCAGCTGTTAGCGGGACTGAATATTGATTACTTAACGACGTCGTTCCGGACGGTGAATACGACGAGTTCAAAGCTGTCGGAGATGAAGGCGGACGACGTACAGAGCTTGTTGAGTGCGATATTGACGAACCAGCAGACGTGTTTGGATGGGCTCAAGGCGACGGCGGGTTCGTGGTCCGTCAAAAATGGCCTTGCCCTCCCACTTGCCTCTGACACCAAGCTGTACTCTATGTCCTTGGCTTTATTTACCAAAGGTTGGGTTCCGAAGAAGAAGAAACGGTCGACATGGACGGCGGCCGGGAGTCAGGGCGGGTTTAGAAACGGTCGGATGTCACTCAAAATGTCGAGCAGAGCGAAAGCGATTTACGAGATGGCGACGCGCCGGAATCTGCTGCAGACTGAAGGCGGCGGCGACGACCAGATTTCGATTAGAGACATCGTCATTACCGGCGTTCCGTACACCAGCGGCTTGACGGAGTAG 762 55.91 MAATTFSSLILLSLYITTAQIPLSAASASVCTSTPDPSYCKSTLPNQTGNVYSYGRSSFRKSLSSSQKFLRLVKKYLRSRSSLTVPAVRALEDCQLLAGLNIDYLTTSFRTVNTTSSKLSEMKADDVQSLLSAILTNQQTCLDGLKATAGSWSVKNGLALPLASDTKLYSMSLALFTKGWVPKKKKRSTWTAAGSQGGFRNGRMSLKMSSRAKAIYEMATRRNLLQTEGGGDDQISIRDIVITGVPYTSGLTE 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6075349 6077260 - Cp4.1LG17g07190.1 Cpe17g00772 484090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00772 253 SMART PMEI_2 22 175 IPR006501 GO:0004857
Cpe17g00772 253 CDD PMEI-like_3 29 180 - -
Cpe17g00772 253 Pfam Plant invertase/pectin methylesterase inhibitor 28 175 IPR006501 GO:0004857
Cpe17g00772 253 PANTHER PECTINESTERASE 21 243 - -
Cpe17g00772 253 PANTHER PECTINESTERASE 21 243 - -
Cpe17g00772 253 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 178 IPR035513 -
Cpe17g00772 253 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 178 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00345 Cpe-Chr2:1861733 Cpe17g00772 Cpe-Chr17:6075349 2.03E-51 dispersed
Cpe05g01083 Cpe-Chr5:7173452 Cpe17g00772 Cpe-Chr17:6075349 9.53E-43 dispersed
Cpe16g00041 Cpe-Chr16:503510 Cpe17g00772 Cpe-Chr17:6075349 3.19E-36 dispersed
Cpe17g00772 Cpe-Chr17:6075349 Cpe09g00348 Cpe-Chr9:2104944 8.41E-20 dispersed
Cpe12g00917 Cpe-Chr12:7916227 Cpe17g00772 Cpe-Chr17:6075349 2.90E-128 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00772 K01051 - csv:101205321 373.244