Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe17g00796 | ATGGCTACCTCCATTAAAGTCCATGGAGTCCCCTTTTCCGGACCCACATGCAGAGTTCTAGCTTGTCTCTACGAGAAAGAACTTGAATACGAGTTCGTCAAACTCAAGATGCACGAAGGGGAACACAAGAAACAGCCATTTCTCTCCATCAATCCGTTTGGTCAAGTTCCTGGGTTCCAAGATGGAGATTTGACGCTTTTTGAATCCAGGGCAATCACGCAGTATATCGTAGGGAATTATGCTAATAATGGAACCCAATTGATTTTCCAAGACCCCAAGAAAGCGGCGATCGTATTGACATGGATTGAAGTGGAGAGCCACCATTATGATCCACCAGCCTCGAAGCTGGTCCTCGAGCTCTGCTTGAAGCCTTTGCTTGGGTGGGGCGAGACAGATGCTGCAGTAGTTGAGCAAAGTGAAGCTGAGCTAGCTAAAGTTCTTGATATCTATGAGGATAGGCTGGCTCAGTCCAAATACTTGGGAGGTGAGTCCTTCAGTTTAGCTGATTTGCACCATCTCCCAACCATAGACTACTTATTTGGGACACAGATGAAGAAACTGTTTGAATCTCGGCCCCATGTCAATGCATGGGCGGCTGATATCATGGGCAGGCCTGCTTGGGCTAAGGTGCTTGCTTTGCGCTAA | 645 | 47.6 | MATSIKVHGVPFSGPTCRVLACLYEKELEYEFVKLKMHEGEHKKQPFLSINPFGQVPGFQDGDLTLFESRAITQYIVGNYANNGTQLIFQDPKKAAIVLTWIEVESHHYDPPASKLVLELCLKPLLGWGETDAAVVEQSEAELAKVLDIYEDRLAQSKYLGGESFSLADLHHLPTIDYLFGTQMKKLFESRPHVNAWAADIMGRPAWAKVLALR | 214 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 6241127 | 6242323 | + | Cp4.1LG17g07080.1 | Cpe17g00796 | 484114 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe17g00796 | 214 | SFLD | Glutathione Transferase (cytosolic) | 4 | 212 | IPR040079 | - | |
| Cpe17g00796 | 214 | SUPERFAMILY | GST C-terminal domain-like | 75 | 212 | IPR036282 | - | |
| Cpe17g00796 | 214 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 84 | IPR004045 | - | |
| Cpe17g00796 | 214 | CDD | GST_C_Phi | 93 | 211 | IPR034347 | - | |
| Cpe17g00796 | 214 | Pfam | Glutathione S-transferase, N-terminal domain | 7 | 77 | IPR004045 | - | |
| Cpe17g00796 | 214 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 4 | 213 | - | - | |
| Cpe17g00796 | 214 | PANTHER | GLUTATHIONE S-TRANSFERASE F6-RELATED | 4 | 213 | - | - | |
| Cpe17g00796 | 214 | SFLD | Main.5: Phi-like | 4 | 212 | - | - | |
| Cpe17g00796 | 214 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 91 | 214 | IPR010987 | - | |
| Cpe17g00796 | 214 | Gene3D | Glutaredoxin | 3 | 88 | - | - | |
| Cpe17g00796 | 214 | Pfam | Glutathione S-transferase, C-terminal domain | 114 | 205 | IPR004046 | - | |
| Cpe17g00796 | 214 | Gene3D | - | 91 | 214 | - | - | |
| Cpe17g00796 | 214 | SUPERFAMILY | Thioredoxin-like | 4 | 84 | IPR036249 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe17g00796 | Cpe-Chr17:6241127 | Cpe03g01560 | Cpe-Chr3:12097087 | 1.05E-08 | dispersed | |
| Cpe17g00796 | Cpe-Chr17:6241127 | Cpe17g00797 | Cpe-Chr17:6242852 | 2.04E-107 | tandem | |
| Cpe07g00339 | Cpe-Chr7:2214690 | Cpe17g00796 | Cpe-Chr17:6241127 | 5.26E-58 | transposed | |
| Cpe12g00950 | Cpe-Chr12:8066961 | Cpe17g00796 | Cpe-Chr17:6241127 | 3.43E-118 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe17g00796 | K00799 | - | csv:101212536 | 343.199 |