Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00796 ATGGCTACCTCCATTAAAGTCCATGGAGTCCCCTTTTCCGGACCCACATGCAGAGTTCTAGCTTGTCTCTACGAGAAAGAACTTGAATACGAGTTCGTCAAACTCAAGATGCACGAAGGGGAACACAAGAAACAGCCATTTCTCTCCATCAATCCGTTTGGTCAAGTTCCTGGGTTCCAAGATGGAGATTTGACGCTTTTTGAATCCAGGGCAATCACGCAGTATATCGTAGGGAATTATGCTAATAATGGAACCCAATTGATTTTCCAAGACCCCAAGAAAGCGGCGATCGTATTGACATGGATTGAAGTGGAGAGCCACCATTATGATCCACCAGCCTCGAAGCTGGTCCTCGAGCTCTGCTTGAAGCCTTTGCTTGGGTGGGGCGAGACAGATGCTGCAGTAGTTGAGCAAAGTGAAGCTGAGCTAGCTAAAGTTCTTGATATCTATGAGGATAGGCTGGCTCAGTCCAAATACTTGGGAGGTGAGTCCTTCAGTTTAGCTGATTTGCACCATCTCCCAACCATAGACTACTTATTTGGGACACAGATGAAGAAACTGTTTGAATCTCGGCCCCATGTCAATGCATGGGCGGCTGATATCATGGGCAGGCCTGCTTGGGCTAAGGTGCTTGCTTTGCGCTAA 645 47.6 MATSIKVHGVPFSGPTCRVLACLYEKELEYEFVKLKMHEGEHKKQPFLSINPFGQVPGFQDGDLTLFESRAITQYIVGNYANNGTQLIFQDPKKAAIVLTWIEVESHHYDPPASKLVLELCLKPLLGWGETDAAVVEQSEAELAKVLDIYEDRLAQSKYLGGESFSLADLHHLPTIDYLFGTQMKKLFESRPHVNAWAADIMGRPAWAKVLALR 214
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
17 6241127 6242323 + Cp4.1LG17g07080.1 Cpe17g00796 484114
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00796 214 SFLD Glutathione Transferase (cytosolic) 4 212 IPR040079 -
Cpe17g00796 214 SUPERFAMILY GST C-terminal domain-like 75 212 IPR036282 -
Cpe17g00796 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Cpe17g00796 214 CDD GST_C_Phi 93 211 IPR034347 -
Cpe17g00796 214 Pfam Glutathione S-transferase, N-terminal domain 7 77 IPR004045 -
Cpe17g00796 214 PANTHER GLUTATHIONE S-TRANSFERASE RHO 4 213 - -
Cpe17g00796 214 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 4 213 - -
Cpe17g00796 214 SFLD Main.5: Phi-like 4 212 - -
Cpe17g00796 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 214 IPR010987 -
Cpe17g00796 214 Gene3D Glutaredoxin 3 88 - -
Cpe17g00796 214 Pfam Glutathione S-transferase, C-terminal domain 114 205 IPR004046 -
Cpe17g00796 214 Gene3D - 91 214 - -
Cpe17g00796 214 SUPERFAMILY Thioredoxin-like 4 84 IPR036249 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe17g00796 Cpe-Chr17:6241127 Cpe03g01560 Cpe-Chr3:12097087 1.05E-08 dispersed
Cpe17g00796 Cpe-Chr17:6241127 Cpe17g00797 Cpe-Chr17:6242852 2.04E-107 tandem
Cpe07g00339 Cpe-Chr7:2214690 Cpe17g00796 Cpe-Chr17:6241127 5.26E-58 transposed
Cpe12g00950 Cpe-Chr12:8066961 Cpe17g00796 Cpe-Chr17:6241127 3.43E-118 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00796 K00799 - csv:101212536 343.199