Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe17g00797 | ATGGCGAGCATCAAAGTCCATGGAAGCCCCATTTCCACCGCCACAGCCAGAGTTCTCGCTTGTCTTTACGAGAAAGATCTCGAATACCAGTTTGTTCTTCTGGACATGAAGAATAATGAGCACAAGAAAGAGCCCTTCCTCTCCATCAATCCGTTTGGTCAAGTTCCTGGGTTTCAAGATGGGGATCTCACGATTTTCGAATCAAGGGCCATTACCCAGTACCTGGCCTCCGCCTACGCCAGCAAGGGAAACCAATTGCTGTCCGACGACCCAAAGAAAGCAGCGATCGTATCAACATGGATTGAAGTGGAAGGCCACCACTACGACCCACCGGGGGTAGCGCTGTCGTACGAGTATCTTGTCAAGCCACTATTCGGTCTGGGCGAGACAGATCCAGCCGCCGTGGCCGAGAACGAAGCTAAGTTGGGGAAAGTTCTTGACATCTACGAGAATCAGCTTAGCAAAAACAAGTTTTTGGCTGGCAATGAGTTCAGTTTGGCAGATCTGCACCACATCCCCAATGTGCACTACTTGTTGGCGACGCCATCGAAGAAGCTGTTCGAGTCACGGCCGCGCGTTAATGCTTGGGTTGCTGAGATCACTTCAAGGCCTTCGTGGGGCAAGGTCCTTGCCTTGCGCCAATTGTAA | 648 | 51.54 | MASIKVHGSPISTATARVLACLYEKDLEYQFVLLDMKNNEHKKEPFLSINPFGQVPGFQDGDLTIFESRAITQYLASAYASKGNQLLSDDPKKAAIVSTWIEVEGHHYDPPGVALSYEYLVKPLFGLGETDPAAVAENEAKLGKVLDIYENQLSKNKFLAGNEFSLADLHHIPNVHYLLATPSKKLFESRPRVNAWVAEITSRPSWGKVLALRQL | 215 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 6242852 | 6244605 | - | Cp4.1LG17g07000.1 | Cpe17g00797 | 484115 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe17g00797 | 215 | CDD | GST_C_Phi | 92 | 210 | IPR034347 | - | |
Cpe17g00797 | 215 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 90 | 215 | IPR010987 | - | |
Cpe17g00797 | 215 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 2 | 83 | IPR004045 | - | |
Cpe17g00797 | 215 | SFLD | Main.5: Phi-like | 1 | 212 | - | - | |
Cpe17g00797 | 215 | Pfam | Glutathione S-transferase, C-terminal domain | 129 | 204 | IPR004046 | - | |
Cpe17g00797 | 215 | Gene3D | - | 90 | 214 | - | - | |
Cpe17g00797 | 215 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 3 | 214 | - | - | |
Cpe17g00797 | 215 | SFLD | Main (cytGST) | 1 | 212 | - | - | |
Cpe17g00797 | 215 | CDD | GST_N_Phi | 4 | 76 | - | - | |
Cpe17g00797 | 215 | PANTHER | GLUTATHIONE S-TRANSFERASE F6-RELATED | 3 | 214 | - | - | |
Cpe17g00797 | 215 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
Cpe17g00797 | 215 | Pfam | Glutathione S-transferase, N-terminal domain | 6 | 76 | IPR004045 | - | |
Cpe17g00797 | 215 | SUPERFAMILY | Thioredoxin-like | 1 | 82 | IPR036249 | - | |
Cpe17g00797 | 215 | SUPERFAMILY | GST C-terminal domain-like | 74 | 213 | IPR036282 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe07g00339 | Cpe-Chr7:2214690 | Cpe17g00797 | Cpe-Chr17:6242852 | 1.24E-64 | dispersed | |
Cpe12g00950 | Cpe-Chr12:8066961 | Cpe17g00797 | Cpe-Chr17:6242852 | 2.02E-108 | dispersed | |
Cpe14g00502 | Cpe-Chr14:3178225 | Cpe17g00797 | Cpe-Chr17:6242852 | 7.03E-09 | dispersed | |
Cpe14g00666 | Cpe-Chr14:4378199 | Cpe17g00797 | Cpe-Chr17:6242852 | 1.26E-10 | dispersed | |
Cpe17g00797 | Cpe-Chr17:6242852 | Cpe05g01048 | Cpe-Chr5:6927048 | 5.09E-10 | dispersed | |
Cpe17g00796 | Cpe-Chr17:6241127 | Cpe17g00797 | Cpe-Chr17:6242852 | 2.04E-107 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe17g00797 | K00799 | - | csv:101212771 | 397.127 |