Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00797 ATGGCGAGCATCAAAGTCCATGGAAGCCCCATTTCCACCGCCACAGCCAGAGTTCTCGCTTGTCTTTACGAGAAAGATCTCGAATACCAGTTTGTTCTTCTGGACATGAAGAATAATGAGCACAAGAAAGAGCCCTTCCTCTCCATCAATCCGTTTGGTCAAGTTCCTGGGTTTCAAGATGGGGATCTCACGATTTTCGAATCAAGGGCCATTACCCAGTACCTGGCCTCCGCCTACGCCAGCAAGGGAAACCAATTGCTGTCCGACGACCCAAAGAAAGCAGCGATCGTATCAACATGGATTGAAGTGGAAGGCCACCACTACGACCCACCGGGGGTAGCGCTGTCGTACGAGTATCTTGTCAAGCCACTATTCGGTCTGGGCGAGACAGATCCAGCCGCCGTGGCCGAGAACGAAGCTAAGTTGGGGAAAGTTCTTGACATCTACGAGAATCAGCTTAGCAAAAACAAGTTTTTGGCTGGCAATGAGTTCAGTTTGGCAGATCTGCACCACATCCCCAATGTGCACTACTTGTTGGCGACGCCATCGAAGAAGCTGTTCGAGTCACGGCCGCGCGTTAATGCTTGGGTTGCTGAGATCACTTCAAGGCCTTCGTGGGGCAAGGTCCTTGCCTTGCGCCAATTGTAA 648 51.54 MASIKVHGSPISTATARVLACLYEKDLEYQFVLLDMKNNEHKKEPFLSINPFGQVPGFQDGDLTIFESRAITQYLASAYASKGNQLLSDDPKKAAIVSTWIEVEGHHYDPPGVALSYEYLVKPLFGLGETDPAAVAENEAKLGKVLDIYENQLSKNKFLAGNEFSLADLHHIPNVHYLLATPSKKLFESRPRVNAWVAEITSRPSWGKVLALRQL 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6242852 6244605 - Cp4.1LG17g07000.1 Cpe17g00797 484115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00797 215 CDD GST_C_Phi 92 210 IPR034347 -
Cpe17g00797 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 215 IPR010987 -
Cpe17g00797 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Cpe17g00797 215 SFLD Main.5: Phi-like 1 212 - -
Cpe17g00797 215 Pfam Glutathione S-transferase, C-terminal domain 129 204 IPR004046 -
Cpe17g00797 215 Gene3D - 90 214 - -
Cpe17g00797 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 214 - -
Cpe17g00797 215 SFLD Main (cytGST) 1 212 - -
Cpe17g00797 215 CDD GST_N_Phi 4 76 - -
Cpe17g00797 215 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 3 214 - -
Cpe17g00797 215 Gene3D Glutaredoxin 1 87 - -
Cpe17g00797 215 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Cpe17g00797 215 SUPERFAMILY Thioredoxin-like 1 82 IPR036249 -
Cpe17g00797 215 SUPERFAMILY GST C-terminal domain-like 74 213 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00339 Cpe-Chr7:2214690 Cpe17g00797 Cpe-Chr17:6242852 1.24E-64 dispersed
Cpe12g00950 Cpe-Chr12:8066961 Cpe17g00797 Cpe-Chr17:6242852 2.02E-108 dispersed
Cpe14g00502 Cpe-Chr14:3178225 Cpe17g00797 Cpe-Chr17:6242852 7.03E-09 dispersed
Cpe14g00666 Cpe-Chr14:4378199 Cpe17g00797 Cpe-Chr17:6242852 1.26E-10 dispersed
Cpe17g00797 Cpe-Chr17:6242852 Cpe05g01048 Cpe-Chr5:6927048 5.09E-10 dispersed
Cpe17g00796 Cpe-Chr17:6241127 Cpe17g00797 Cpe-Chr17:6242852 2.04E-107 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00797 K00799 - csv:101212771 397.127