Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00827 ATGGCTCGGAGTAATGAAGTCAACCTTAATGAATCTAAGAGCGTTGTTCCATTGAATACATGGGTGCTTATCTCCAATTTCAAGCTAGCTTACAACATTCTCCGCCGCTCGGACGGGACATTCAACCGTGAGTTAGCGGAGTATCTCGAACGTAAAGTTCCTGCCAATGTGATTCCTGTTGATGGGGTTTTCTCGTTTGATCATGTCGATCGAGCTTCTGGCCTTCTTAACCGAGTTTATCAGCTATCCCCTGGAAACGAAGCTCGATGGGGTATCGTTGATCTTGAGAAGCCTCTAAGCACGTCTAAAGTTGTTCCTGTCATCCTGTTTTTTCATGGGGGGAGCTTTGCTCATTCATCAGCCAACAGTGCTATCTATGACACGTTTTGCCGTCGAATTGTAAGCATCTGCAAGGCAGTTGTTGTCTCGGTTAACTATCGTCGGTCGCCTGAACATCCGTATCCATGTGCGTATGAGGATGGCTGGGCTGCACTTAAATGGGTTAAGTCAAAAACATGGCTGCAAAGTGGGAAGGACTCTAAGGTTCATGTGTATTTAGCAGGCGACAGTTCTGGTGGCAACATTGCTCATCATGTTGCTGTGAAGGCAGCTGAAGAAGACATCGAAGTCTTAGGCAATATCCTTCTTCACCCGATGTTCGGTGGAGAAAAGAGAACCGAATCCGAGAAGAAACTCGACGGTAAATACTTCGTAACCATCCAAGACCGAGATTGGTACTGGAGAGCCTATCTCCCTGAAGGAGAAGACAGAGATCATCCAGCTTGCAACATTTTTGGCCCCAAATCCAAAAGCATAGCAGGACTCGACTTCCCGAAAAGCCTAGTCGTCGTTGCCGGTTTGGATTTAATGCAAGACTGGCAACTTGCTTACGTGCAAGGACTGAAAGACTCCGGTCACGACGTTAAACTTCTCTTCCTCGAACAGGCGACAATCGGGTTCTACTTCTTGCCTAATAATCAACATTTCTACTGTCTAATGGAAGAGATAAATAGCTTCATCAACCCTTAA 1029 46.16 MARSNEVNLNESKSVVPLNTWVLISNFKLAYNILRRSDGTFNRELAEYLERKVPANVIPVDGVFSFDHVDRASGLLNRVYQLSPGNEARWGIVDLEKPLSTSKVVPVILFFHGGSFAHSSANSAIYDTFCRRIVSICKAVVVSVNYRRSPEHPYPCAYEDGWAALKWVKSKTWLQSGKDSKVHVYLAGDSSGGNIAHHVAVKAAEEDIEVLGNILLHPMFGGEKRTESEKKLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNIFGPKSKSIAGLDFPKSLVVVAGLDLMQDWQLAYVQGLKDSGHDVKLLFLEQATIGFYFLPNNQHFYCLMEEINSFINP 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6433696 6436283 + Cp4.1LG17g06730.1 Cpe17g00827 484145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00827 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Cpe17g00827 342 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Cpe17g00827 342 PANTHER ARYLACETAMIDE DEACETYLASE 3 340 - -
Cpe17g00827 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Cpe17g00827 342 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Cpe17g00827 342 PANTHER GIBBERELLIN RECEPTOR GID1B 3 340 - -
Cpe17g00827 342 SUPERFAMILY alpha/beta-Hydrolases 98 341 IPR029058 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g00986 Cpe17g00827 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00986 Cpe-Chr12:8282047 Cpe17g00827 Cpe-Chr17:6433696 0 dispersed
Cpe17g00827 Cpe-Chr17:6433696 Cpe02g00985 Cpe-Chr2:8921312 2.14E-73 dispersed
Cpe04g00136 Cpe-Chr4:1250526 Cpe17g00827 Cpe-Chr17:6433696 0 transposed
Cpe18g00057 Cpe-Chr18:1213123 Cpe17g00827 Cpe-Chr17:6433696 0 transposed
Cpe12g00995 Cpe-Chr12:8345727 Cpe17g00827 Cpe-Chr17:6433696 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00827 K14493 - csv:101219912 674.855