Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00838 ATGCTTCCGTGGGGAGGTCTTAGTTGCTGTTTGAGTGCAGCTGCTCTCTATCTTCTTGGAAGGAGTAGTGGCCGGGATGCGGAGTTACTGAAATCTGTTACGAGGGTCGATCAGTTGAAGGAACTGGCTCAATTGCTTGAGGCTGAATGTGTAGTACCTCTGGTTGTTGCAATTTCTGGGAGAGTAAGCTCTGATACACCAATAAATTGCGAGTTTAGTGGGCTGCGGGGAGTAATTGTGGAGGAAACGGCAGAACAACACTTTCTGAAGCACAACGATGCAGGATCATGGATTCAGGATTCTGCACTGATGCTCTCCATGAGCAAAGAAGTTCCTTGGTATCTGGATGATGGGACTGGTCGTGCATTTGTGGTGGGAGCTCGAAGTGCCACAAGTTTTATATTACCAGTAGTGAGTGAGATATTTGAAGAGTCTGGCAGATCTCTTATGCGTGGAACCTTAGATTATCTCCAAGGTCTTAAGATGCTTGGAGTTAAGCGAATAGAGCGTGTACTACCAACTGGCACTTCCTTGACTGTCGTTGGTGAGGCTGCCAAAGATGACATTGGTACTATTAGAATACAACGACCACACAAAGGGCCATTTTATGTCTCCCCAAAGACAATCGATCAACTCATAAGCAATCTTGGGAAGTGGGCCAGGTGGTACAAGTATGCTTCCCTGGGTTTGAGCATATTTGGTTTGTATCTCGTCACAAAGCATGCTATTCTTTATCTCTTGGGGAGAAGGCGTCGCTGGAAATATCAGAAAAGGGTCCTAGCTGCAGCTGCCAAGAGATCAAACCAAGCAAATGAAGCTGCTAATAGTTGGACTTGGAAACGGACTCAGAATACGCCTGTTTTTGATGATTTAGTGTGGGAGTGGAAGTCTACTCTTAATGGCACTAGAAGTACACCTCGCTTTCTTTATTGGGTTTACTGTTGTGCGGCCATATGTGCTGCTGTATAG 969 45.82 MLPWGGLSCCLSAAALYLLGRSSGRDAELLKSVTRVDQLKELAQLLEAECVVPLVVAISGRVSSDTPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTGRAFVVGARSATSFILPVVSEIFEESGRSLMRGTLDYLQGLKMLGVKRIERVLPTGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARWYKYASLGLSIFGLYLVTKHAILYLLGRRRRWKYQKRVLAAAAKRSNQANEAANSWTWKRTQNTPVFDDLVWEWKSTLNGTRSTPRFLYWVYCCAAICAAV 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6504171 6512849 - Cp4.1LG17g06560.1 Cpe17g00838 484156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00838 322 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SP1-RELATED 1 273 - -
Cpe17g00838 322 Pfam E3 Ubiquitin ligase 86 235 IPR022170 GO:0004842|GO:0006996|GO:0016567
Cpe17g00838 322 PANTHER - 1 273 IPR044231 GO:0004842|GO:0016567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00838 K15688 - csv:101218196 493.812