Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00866 ATGGATCTAGTAAATGCGGGCGAGGCCAGTGATGCTCCGGCGGGTAAGAACTCCGGCAATCAAGTGGCGGACATTGTTTCCGGTAAGTCTAGTAATCTCCAAGAGAAGGATGTGGGTTCAAAATTGGAGACAGGAAGCAAAAGCAGTAAGGATATGGTTTTTCGAGCGGATAAGATTGATTTCAAGAATTGGGATATTCAGCTGGACAAGCACTTGAGCAGGGCTTGGTCGAGGGACAGGGAAGTGCCTGCCAAAAAGGAAGAATGGGAGATTGACTTGTCTAAACTTGATATCAGATACGTCAAAGCTCATGGAACTTTTGGTACCATTTACAGAGGAAATTATGATGGCAATGATGTTGCAGTGAAAGTGCTTGATTGGGGGGAGGACGGTGTCTCCTCAGTCGCTGAAATTGCTGCTCTTCGAACATCTTTTCGCCAGGAAGTTGCTGTTTGGCATAAGCTTGACCATCCCAATGTTGCAAAGTTTTTTGGAGCATCAATGGGGACGTACAACCTTAAAATCCCTTCACAAACCTCATCAAGTGATGGTAACCAATCTTTTCCTTCAAGGGCTTGCTGCGTTGTTGTTGAGTATCTTCCAGGAGGAACACTAAAGGGATTTTTAATAAAAAATAGGAAAAAGAAACTTGCACTTAAGGTTGTAATTCAACTTGTTTTGGATCTTTCTAGAGGGTAA 699 43.49 MDLVNAGEASDAPAGKNSGNQVADIVSGKSSNLQEKDVGSKLETGSKSSKDMVFRADKIDFKNWDIQLDKHLSRAWSRDREVPAKKEEWEIDLSKLDIRYVKAHGTFGTIYRGNYDGNDVAVKVLDWGEDGVSSVAEIAALRTSFRQEVAVWHKLDHPNVAKFFGASMGTYNLKIPSQTSSSDGNQSFPSRACCVVVEYLPGGTLKGFLIKNRKKKLALKVVIQLVLDLSRG 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6706885 6709806 - Cp4.1LG17g06310.1 Cpe17g00866 484184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00866 232 ProSiteProfiles Protein kinase domain profile. 96 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe17g00866 232 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 26 232 - -
Cpe17g00866 232 SUPERFAMILY Protein kinase-like (PK-like) 82 232 IPR011009 -
Cpe17g00866 232 MobiDBLite consensus disorder prediction 14 39 - -
Cpe17g00866 232 MobiDBLite consensus disorder prediction 1 45 - -
Cpe17g00866 232 Gene3D Phosphorylase Kinase; domain 1 84 178 - -
Cpe17g00866 232 Pfam Protein tyrosine and serine/threonine kinase 104 232 IPR001245 GO:0004672|GO:0006468
Cpe17g00866 232 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 26 232 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe17g00866 Cpe-Chr17:6706885 Cpe18g00839 Cpe-Chr18:7743553 1.32E-66 dispersed
Cpe17g00866 Cpe-Chr17:6706885 Cpe03g01453 Cpe-Chr3:11593287 1.07E-84 wgd
Cpe17g00866 Cpe-Chr17:6706885 Cpe08g00274 Cpe-Chr8:1762011 6.48E-101 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62957 PF07714 PK_Tyr_Ser-Thr 3.10E-09 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00866 - - mcha:111018484 405.986