Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00991 ATGGGATCATGTTTCTCTGGGGAGCGCAAGAACCGAAAGATCGTTTATTCTGAGATCGCTTCCACTTCTCATAATGATGCCGTTTTTACCCGAAAGAGCTCCAGGAGGAAGATTACGAGAAGAGGTTGTCCCGTTGATGACGCTACAAGGGAGATGTCGCTTCATCGAGTTCCTGGCCGGATGTTTTTGAATGGATCAACTGATAATGCGACGCTCTTTACTAGGCAAGGCAAGAAAGGCGTTAATCAGGACGCTATGATTGTCTGGGAGAATTTTGGTTCAAAAGAAGATGCAACCTTTTGCGGAGTCTTTGATGGACACGGTCCCTTTGGCCATATGGTTGCAAAGAAAGTCAGAGATTCTCTTCCTCTAAAACTGAGTGCTCAGTGGGAATTGGACGCTACCAGAGGGAATGGGCAAACTGAGGCGAGATGTCGAGTCTCTCCACCAACGCTGATTAACAAGGACTCTGAAATCTCTCATTGTGATCTTGCTCGTCAGGACGGTTACAATGACATGTATGTCAACTTGAAAGAGTCTTTTCTAAAGGCTTTTAAGGTGATGGACAAGGAGCTTAAACTACATCCTCATATTGATTGCTTTTCCAGTGGTACAACATCAGTTGCTTTGGTCAAACAGGGTCGGGATCTTATCATCGGAAATGTCGGGGACTCGAGGGCTGTATTAGGTACCAGAGATAAATCTAACTCTCTCATTGCAGTTCAGCTGACTGTGGACCTCAAGCCAAATCTTCCAAGGGAAGCTGAAAGGATCAGACTTTGCAAAGGAAGAATCTTTGCTCTTCAAAGTGAGCCTCAGATTTTTCGGGTTTGGCTTCCCAACAGTGATTGTCCTGGTCTTGCTATGGCCAGAGCCTTTGGAGATTTCTGTTTAAAAGACTTTGGCTTGATAGCCGTTCCTGACGTTTCTTATTATCATCTTTCGGAGAAAGATGAATTTGTGGTACTGGCTACAGATGGGGTTTGGGATGTTCTCTCAAATGAAGAGGTTGTGGCAACTGTTGCATCTTCTCCAAGATCCTCTGCAGCTCGTAACCTTGTGGATTCAGCTACTCGAGCATGGAGATGTAAGTACCCTGCTGCCAAGGTGGATGATTGTGCTGTAGTCTGCCTGTTCCTGAACTCTAGTGAGACCGCTACAGCGATACCTAAAGAGCAGGAGTTCACTGAGGAAATGGAAACTAAGTTCTCTTAA 1215 45.43 MGSCFSGERKNRKIVYSEIASTSHNDAVFTRKSSRRKITRRGCPVDDATREMSLHRVPGRMFLNGSTDNATLFTRQGKKGVNQDAMIVWENFGSKEDATFCGVFDGHGPFGHMVAKKVRDSLPLKLSAQWELDATRGNGQTEARCRVSPPTLINKDSEISHCDLARQDGYNDMYVNLKESFLKAFKVMDKELKLHPHIDCFSSGTTSVALVKQGRDLIIGNVGDSRAVLGTRDKSNSLIAVQLTVDLKPNLPREAERIRLCKGRIFALQSEPQIFRVWLPNSDCPGLAMARAFGDFCLKDFGLIAVPDVSYYHLSEKDEFVVLATDGVWDVLSNEEVVATVASSPRSSAARNLVDSATRAWRCKYPAAKVDDCAVVCLFLNSSETATAIPKEQEFTEEMETKFS 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7521732 7526268 + Cp4.1LG17g09770.1 Cpe17g00991 484309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00991 404 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 388 - -
Cpe17g00991 404 SUPERFAMILY PP2C-like 70 381 IPR036457 -
Cpe17g00991 404 Pfam Protein phosphatase 2C 83 358 IPR001932 -
Cpe17g00991 404 PANTHER ALPHABET, ISOFORM E-RELATED 1 388 - -
Cpe17g00991 404 CDD PP2Cc 75 380 IPR001932 -
Cpe17g00991 404 SMART PP2C_4 58 378 IPR001932 -
Cpe17g00991 404 Gene3D - 64 383 IPR036457 -
Cpe17g00991 404 ProSiteProfiles PPM-type phosphatase domain profile. 69 380 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01342 Cpe-Chr2:11885714 Cpe17g00991 Cpe-Chr17:7521732 4.48E-166 dispersed
Cpe14g00830 Cpe-Chr14:6723905 Cpe17g00991 Cpe-Chr17:7521732 1.71E-147 dispersed
Cpe15g00794 Cpe-Chr15:8009641 Cpe17g00991 Cpe-Chr17:7521732 4.10E-136 dispersed
Cpe17g00991 Cpe-Chr17:7521732 Cpe19g00135 Cpe-Chr19:1057562 3.47E-103 dispersed
Cpe02g00251 Cpe-Chr2:1299729 Cpe17g00991 Cpe-Chr17:7521732 4.07E-83 transposed
Cpe12g00505 Cpe-Chr12:4951761 Cpe17g00991 Cpe-Chr17:7521732 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00991 - - csv:101222320 644.425