Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cpe17g01020	ATGACGCTTTCGGAGCAGAATCCGGCGGAGTTTCGCAAAGGTTTGGAAGGTGAGGGTCTGTTTGAGGAGCTATGGAAGGCTTGTGCAGGGCCTCTTGTTGAAGTTCCTTTCAATGGAGAAAGGGTTTTTTACTTTCCTCAAGGGCATATGGAACAACTGGAAGAGTCAACAAATCATGAACTCAATCACCAAATCCCTCATTTTGATCTTCCTTCTAAGATCCTCTGTCGTGTCGTGAACATTCGTTTGTTGGCTGAAAAGGAAACGGATGAGGTCTATGCTCAAATCACTTTACAACCAGAAGCTGATCAAAGTGAGCCGCAATGCCCTGATCCAGAGCCGCCTGAGCGGACAAGGCCAACTGTTCATTCTTTTTGTAAGATTTTGACAGCTTCTGATACTAGCACTCATGGAGGTTTCTCTGTTCTTAAAAAACATGCCACTGAATGCCTTCCTCCCCTTGATATGAGTCAGTCCACCCCAACTCAGGAGCTAGCTGCCAAGGATCTTCATGGACATGAGTGGAAATTTAAGCATATTTTCAGAGGTCAACCACGAAGGCATTTGCTAACGACAGGGTGGAGTACGTTTGTCGTATCGAAACGACTCGTTGCTGGGGATGCCTTTGTGTTCTTAAGGGGTGACAATGGGGAACTAAGAGTCGGGGTACGACGACAGGCTCGACAGCAGAGTTTGATGCCTTCCTCTGTGATATCTAGCCATAGTATGCATCTTGGAGTTCTTGCTACTGCTTCTCATGCTGTTCGTACGCAGACGTTTTTCGTTGTGTATTACAAGCCGAGAACTAGCCAATTCATCATCGGCTTAAACAAATACTTGGAAACGATCAAGAACAGATATGAAGTCGGGATGCGGTTTAAGATGAGATTCGAAGGAGAGGAATCACCGGAGAGAAGGTTCACTGGTACTATTGTTGGTGTTGGAGACATATCACCAATTTGGTCTGATTCTAAATGGCGATCACTGAAGATCCAATGGGATGAAGCTGCTGCAATCCAGAGGCCCGAGCGAGTTTCTCCGTGGGAAATCGAACCGTTTGTACCGTCTGCGTCCTTAAACTTCACTCATCCATCCATAAAGAGTAAGAGGGCTCGACCCGTCGAGGTTCCTCCTCCTGAAAACACTTCTAGCTCGACTCCTACGGGTTTTTGGCTTCACGGATCGACGATTCCTCACGAGATACCCCAACTAAGTGGTGCTAATGATGTTCCGAGCAGCGGTAACCAGGTTGTTTGGTCTCTCTGGCAGCAAACGCTCGATGTCAATGTCGATAGCAGTCGAAGCCACTGCAATCCAATGGCACATGTTGAAGGCATTTGGCCTTCTCCTCCTCCTCCACTCTGTAATAACTCCCTGAAGCCTCTTCCCTCCCCTTATTCTCCATCCAGTACTTCAAAGCCTAGCAGTGAGCTCATTGAGCACGATCAATCGGAGAAAGGGAATAAACCCGACATCTCTCTCGGCTGCCGAATATTCGGGATCGATTTGAAAAAGAACTCTAGCATTGTCCCTTCCTTGGAGAAGAAATCGTGTTGCCAAACTACGGTGGCCACCGACATTGCCAAGGATCCAGTACCGATAGCTGCTGTGACATCTCAAGCCGATGCAGGAAAGGAGCAGCAGCAAGTTGCATCAGAGCTGTCGATGAAAGGAACACAGACGAATCACATTCCGAATTCATCGTCGAGAACACGTACAAAGGTACAAATGCAAGGAGTTGCTGTCGGTCGAGCAGTTGACTTAACGACACTGAAAGGGTACGAAGATCTCATAGACGAACTCGAGAACGTGTTCGAAATAAAAGGAGAACTTCGCGAAATGAACAAGTGGTCTATCGTTTTCACCGACGATGAATACGACATGATGCTCGTGGGGGATGATCCATGGCCAGAATTCTGCCAGATGGTGAAGAGGATCTTTATATACTCGAGCGAAGAAGTTAAGACGATGAGTAGCAACAGCAAGCTCGTTTCGCCACCATCCTTAGATAGCTTGGATTCAGAGCGCAAGACAGAATCCTAA	2043	47.28	MTLSEQNPAEFRKGLEGEGLFEELWKACAGPLVEVPFNGERVFYFPQGHMEQLEESTNHELNHQIPHFDLPSKILCRVVNIRLLAEKETDEVYAQITLQPEADQSEPQCPDPEPPERTRPTVHSFCKILTASDTSTHGGFSVLKKHATECLPPLDMSQSTPTQELAAKDLHGHEWKFKHIFRGQPRRHLLTTGWSTFVVSKRLVAGDAFVFLRGDNGELRVGVRRQARQQSLMPSSVISSHSMHLGVLATASHAVRTQTFFVVYYKPRTSQFIIGLNKYLETIKNRYEVGMRFKMRFEGEESPERRFTGTIVGVGDISPIWSDSKWRSLKIQWDEAAAIQRPERVSPWEIEPFVPSASLNFTHPSIKSKRARPVEVPPPENTSSSTPTGFWLHGSTIPHEIPQLSGANDVPSSGNQVVWSLWQQTLDVNVDSSRSHCNPMAHVEGIWPSPPPPLCNNSLKPLPSPYSPSSTSKPSSELIEHDQSEKGNKPDISLGCRIFGIDLKKNSSIVPSLEKKSCCQTTVATDIAKDPVPIAAVTSQADAGKEQQQVASELSMKGTQTNHIPNSSSRTRTKVQMQGVAVGRAVDLTTLKGYEDLIDELENVFEIKGELREMNKWSIVFTDDEYDMMLVGDDPWPEFCQMVKRIFIYSSEEVKTMSSNSKLVSPPSLDSLDSERKTES	680

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
17	7722341	7726267	+	Cp4.1LG17g10130.1	Cpe17g01020	484338

Annotation

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Cpe17g01020	680	PANTHER	AUXIN RESPONSE FACTOR 11	8	668	-	-
Cpe17g01020	680	MobiDBLite	consensus disorder prediction	98	120	-	-
Cpe17g01020	680	SUPERFAMILY	CAD & PB1 domains	566	646	-	-
Cpe17g01020	680	MobiDBLite	consensus disorder prediction	460	477	-	-
Cpe17g01020	680	MobiDBLite	consensus disorder prediction	458	491	-	-
Cpe17g01020	680	Pfam	AUX/IAA family	558	655	IPR033389	-
Cpe17g01020	680	Gene3D	-	286	358	-	-
Cpe17g01020	680	Gene3D	-	122	227	IPR015300	-
Cpe17g01020	680	ProSiteProfiles	B3 DNA-binding domain profile.	125	227	IPR003340	GO:0003677
Cpe17g01020	680	MobiDBLite	consensus disorder prediction	554	574	-	-
Cpe17g01020	680	CDD	B3_DNA	123	225	IPR003340	GO:0003677
Cpe17g01020	680	SUPERFAMILY	DNA-binding pseudobarrel domain	116	254	IPR015300	-
Cpe17g01020	680	Pfam	B3 DNA binding domain	125	226	IPR003340	GO:0003677
Cpe17g01020	680	PANTHER	AUXIN RESPONSE FACTOR 4-RELATED	8	668	IPR044835	GO:0003677\|GO:0006355\|GO:0009725
Cpe17g01020	680	SMART	B3_2	125	227	IPR003340	GO:0003677
Cpe17g01020	680	MobiDBLite	consensus disorder prediction	369	388	-	-
Cpe17g01020	680	MobiDBLite	consensus disorder prediction	657	680	-	-
Cpe17g01020	680	Gene3D	-	566	658	-	-
Cpe17g01020	680	Pfam	Auxin response factor	251	330	IPR010525	GO:0003677\|GO:0005634\|GO:0006355\|GO:0009725
Cpe17g01020	680	ProSiteProfiles	PB1 domain profile.	570	651	IPR000270	GO:0005515

Pathway

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cpe17g01020	K14486	K14486, ARF; auxin response factor	-	csv:101205805	1068.14

Dupl-types

Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
Cpe13g00097	Cpe-Chr13:707914	Cpe17g01020	Cpe-Chr17:7722341	0	dispersed
Cpe14g00449	Cpe-Chr14:2820937	Cpe17g01020	Cpe-Chr17:7722341	0	dispersed
Cpe17g01020	Cpe-Chr17:7722341	Cpe18g00939	Cpe-Chr18:8268551	1.31E-30	dispersed
Cpe17g01020	Cpe-Chr17:7722341	Cpe01g00608	Cpe-Chr1:3504405	0	transposed

Deco-Alignment

Select	Vvi1	Blo1	Blo2	Bda1	Bda2	Bpe1	Bpe2	Bma1	Bma2	Cmo1	Cmo2	Cma1	Cma2	Car1	Car2	Sed1	Cpe1	Cpe2	Bhi1	Tan1	Cmetu1	Lac1	Hepe1	Mch1	Lcy1	Cla1	Cam1	Cec1	Cco1	Clacu1	Cmu1	Cre1	Cone1	Cone2	Cone3	Cone4	Lsi1	Csa1	Chy1	Cme1	Blo3	Blo4	Bda3	Bda4	Bpe3	Bpe4	Bma3	Bma4	Sed2	Cmo3	Cmo4	Cma3	Cma4	Car3	Car4	Cpe3	Cpe4	Bhi2	Tan2	Cmetu2	Lac2	Hepe2	Mch2	Lcy2	Cla2	Cam2	Cec2	Cco2	Clacu2	Cmu2	Cre2	Lsi2	Csa2	Chy2	Cme2
	Vvi1g1292	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Cpe17g01020	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.

Syn-Families

Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
Cpe12g01066	CCT	45	687	B3 DNA Binding Superfamily	AT3G24650	51.4	2.1e-111	400.6
Cpe01g01959	.	3	201	B3 DNA Binding Superfamily	AT3G26790	55.7	2.8e-60	229.6
Cpe13g00523	.	71	243	B3 DNA Binding Superfamily	AT3G26790	52.0	6.4e-49	191.8
Cpe09g00275	CST	11	338	B3 DNA Binding Superfamily	AT1G25560	61.4	1.2e-104	377.1
Cpe01g01350	.	22	339	B3 DNA Binding Superfamily	AT1G25560	61.9	2.8e-104	375.9
Cpe01g01766	CST	40	326	B3 DNA Binding Superfamily	AT1G25560	62.6	1.3e-93	340.5
Cpe13g00343	.	36	332	B3 DNA Binding Superfamily	AT1G25560	60.9	6.4e-93	338.2
Cpe08g00992	CCT,ECH	36	164	B3 DNA Binding Superfamily	AT1G25560	60.6	3.5e-38	156.4
Cpe17g00919	.	92	208	B3 DNA Binding Superfamily	AT1G25560	61.6	2.9e-37	153.3
Cpe05g00757	.	54	162	B3 DNA Binding Superfamily	AT1G25560	66.9	6.5e-37	152.1
Cpe05g00757	.	53	167	B3 DNA Binding Superfamily	AT1G01030	81.0	1.0e-52	204.5
Cpe17g00919	.	98	211	B3 DNA Binding Superfamily	AT1G01030	80.0	6.7e-52	201.8
Cpe14g00507	CCT,ECH	28	142	B3 DNA Binding Superfamily	AT1G01030	74.8	9.0e-49	191.4
Cpe08g00992	CCT,ECH	33	149	B3 DNA Binding Superfamily	AT1G01030	60.0	4.6e-37	152.5
Cpe01g01350	.	174	282	B3 DNA Binding Superfamily	AT1G01030	66.1	6.1e-37	152.1
Cpe09g00275	CST	167	279	B3 DNA Binding Superfamily	AT1G01030	62.9	1.8e-36	150.6
Cpe19g00413	CCT,ECH	15	679	B3 DNA Binding Superfamily	AT4G30080	59.8	3.8e-216	748.4
Cpe05g00816	.	18	702	B3 DNA Binding Superfamily	AT4G30080	57.7	4.4e-212	734.9
Cpe16g00530	.	8	650	B3 DNA Binding Superfamily	AT4G30080	58.3	7.0e-210	727.6
Cpe01g02236	CCT,ECH	5	680	B3 DNA Binding Superfamily	AT4G30080	56.8	5.7e-204	708.0
Cpe13g00800	CCT,ECH	5	678	B3 DNA Binding Superfamily	AT4G30080	54.7	2.9e-200	695.7
Cpe10g00219	CCT,ECH	7	587	B3 DNA Binding Superfamily	AT4G30080	54.9	2.3e-181	632.9
Cpe05g01232	.	16	394	B3 DNA Binding Superfamily	AT3G18990	55.1	1.3e-104	377.1
Cpe16g00215	.	62	425	B3 DNA Binding Superfamily	AT3G18990	58.2	3.2e-103	372.5
Cpe08g01328	.	1	546	B3 DNA Binding Superfamily	AT1G59750	53.3	4.1e-170	595.5
Cpe17g01020	.	14	663	B3 DNA Binding Superfamily	AT1G59750	50.4	1.5e-169	593.6
Cpe01g00608	.	22	676	B3 DNA Binding Superfamily	AT1G59750	50.1	1.9e-159	560.1
Cpe11g00650	.	17	398	B3 DNA Binding Superfamily	AT1G59750	51.9	6.4e-107	385.6
Cpe10g00065	CCT	23	383	B3 DNA Binding Superfamily	AT1G59750	55.1	5.4e-106	382.5
Cpe20g00545	CCT,CST	23	396	B3 DNA Binding Superfamily	AT1G59750	53.4	5.4e-106	382.5
Cpe02g00083	CCT	42	379	B3 DNA Binding Superfamily	AT1G59750	51.6	4.6e-97	352.8
Cpe16g00530	.	7	648	B3 DNA Binding Superfamily	AT2G28350	59.6	5.0e-208	721.5
Cpe05g00816	.	17	701	B3 DNA Binding Superfamily	AT2G28350	57.5	1.6e-206	716.5
Cpe19g00413	CCT,ECH	13	677	B3 DNA Binding Superfamily	AT2G28350	55.3	2.1e-198	689.5
Cpe01g02236	CCT,ECH	16	674	B3 DNA Binding Superfamily	AT2G28350	52.7	8.6e-176	614.4
Cpe13g00800	CCT,ECH	16	675	B3 DNA Binding Superfamily	AT2G28350	51.1	1.5e-172	603.6
Cpe10g00219	CCT,ECH	19	586	B3 DNA Binding Superfamily	AT2G28350	53.1	3.7e-171	599.0
Cpe17g01020	.	14	678	B3 DNA Binding Superfamily	AT2G46530	54.9	7.0e-180	627.9
Cpe14g00449	.	13	724	B3 DNA Binding Superfamily	AT2G46530	51.6	4.2e-177	618.6
Cpe01g00608	.	18	696	B3 DNA Binding Superfamily	AT2G46530	52.5	7.5e-174	607.8
Cpe05g00788	.	18	632	B3 DNA Binding Superfamily	AT2G46530	53.8	5.2e-167	585.1
Cpe10g00065	CCT	1	368	B3 DNA Binding Superfamily	AT2G46530	51.9	8.7e-98	355.1
Cpe20g00545	CCT,CST	1	368	B3 DNA Binding Superfamily	AT2G46530	50.1	3.1e-95	346.7
Cpe19g00413	CCT,ECH	15	679	B3 DNA Binding Superfamily	AT4G30080	59.8	3.8e-216	748.4
Cpe05g00816	.	18	702	B3 DNA Binding Superfamily	AT4G30080	57.7	4.4e-212	734.9
Cpe16g00530	.	8	650	B3 DNA Binding Superfamily	AT4G30080	58.3	7.0e-210	727.6
Cpe01g02236	CCT,ECH	5	680	B3 DNA Binding Superfamily	AT4G30080	56.8	5.7e-204	708.0
Cpe13g00800	CCT,ECH	5	678	B3 DNA Binding Superfamily	AT4G30080	54.7	2.9e-200	695.7
Cpe10g00219	CCT,ECH	7	587	B3 DNA Binding Superfamily	AT4G30080	54.9	2.3e-181	632.9
Cpe17g01020	.	50	665	B3 DNA Binding Superfamily	AT3G61830	54.3	4.2e-168	588.6
Cpe01g00608	.	54	686	B3 DNA Binding Superfamily	AT3G61830	50.2	1.8e-158	556.6
Cpe05g00788	.	54	639	B3 DNA Binding Superfamily	AT3G61830	52.5	1.9e-149	526.6
Cpe20g00545	CCT,CST	51	364	B3 DNA Binding Superfamily	AT3G61830	51.4	2.4e-83	307.0
Cpe11g01202	CST	3	847	B3 DNA Binding Superfamily	AT1G19220	51.6	5.9e-283	971.1
Cpe07g01081	CST	1	880	B3 DNA Binding Superfamily	AT1G19220	50.9	4.7e-272	934.9
Cpe18g00939	.	45	410	B3 DNA Binding Superfamily	AT1G19220	51.6	2.9e-104	377.5
Cpe01g00608	.	10	360	B3 DNA Binding Superfamily	AT1G19220	50.4	4.2e-95	347.1
Cpe19g01041	CCT	46	380	B3 DNA Binding Superfamily	AT1G19220	50.1	4.9e-88	323.6
Cpe17g01020	.	20	224	B3 DNA Binding Superfamily	AT1G43950	56.1	1.5e-60	229.9
Cpe14g00449	.	14	223	B3 DNA Binding Superfamily	AT1G43950	55.0	3.7e-59	225.3
Cpe01g00608	.	13	228	B3 DNA Binding Superfamily	AT1G43950	53.4	1.9e-58	223.0
Cpe05g00788	.	24	228	B3 DNA Binding Superfamily	AT1G43950	55.3	1.9e-58	223.0
Cpe18g00939	.	43	248	B3 DNA Binding Superfamily	AT1G43950	52.4	1.3e-56	216.9
Cpe01g02387	.	42	209	B3 DNA Binding Superfamily	AT1G43950	51.8	1.7e-43	173.3
Cpe10g00168	CCT	150	443	B3 DNA Binding Superfamily	AT2G33860	65.3	1.5e-107	387.1
Cpe19g01041	CCT	150	435	B3 DNA Binding Superfamily	AT2G33860	64.5	4.8e-106	382.1
Cpe05g00832	.	168	451	B3 DNA Binding Superfamily	AT2G33860	57.3	1.7e-90	330.5
Cpe18g00939	.	149	438	B3 DNA Binding Superfamily	AT2G33860	50.7	4.0e-76	282.7
Cpe20g00545	CCT,CST	127	358	B3 DNA Binding Superfamily	AT2G33860	56.9	5.1e-71	265.8
Cpe10g00065	CCT	127	358	B3 DNA Binding Superfamily	AT2G33860	56.5	4.3e-70	262.7
Cpe01g00608	.	129	356	B3 DNA Binding Superfamily	AT2G33860	52.8	5.2e-68	255.8
Cpe11g00650	.	131	362	B3 DNA Binding Superfamily	AT2G33860	53.9	2.0e-67	253.8
Cpe14g00449	.	124	351	B3 DNA Binding Superfamily	AT2G33860	51.9	2.6e-67	253.4
Cpe02g00083	CCT	149	407	B3 DNA Binding Superfamily	AT2G33860	52.7	5.8e-67	252.3
Cpe17g01020	.	125	352	B3 DNA Binding Superfamily	AT2G33860	52.8	3.8e-66	249.6
Cpe05g00788	.	129	337	B3 DNA Binding Superfamily	AT2G33860	52.4	1.2e-59	228.0
Cpe05g00832	.	48	775	B3 DNA Binding Superfamily	AT5G60450	60.4	9.0e-246	847.0
Cpe16g00547	.	47	719	B3 DNA Binding Superfamily	AT5G60450	55.5	7.2e-219	757.7
Cpe02g00083	CCT	20	930	B3 DNA Binding Superfamily	AT1G19850	60.6	1.7e-288	989.2
Cpe06g00079	CCT	18	874	B3 DNA Binding Superfamily	AT1G19850	60.2	4.7e-270	927.9
Cpe01g00608	.	18	379	B3 DNA Binding Superfamily	AT1G19850	51.2	3.9e-99	360.1
Cpe10g00065	CCT	1	887	B3 DNA Binding Superfamily	AT1G30330	68.6	0.0e+00	1188.3
Cpe20g00545	CCT,CST	1	879	B3 DNA Binding Superfamily	AT1G30330	69.4	0.0e+00	1165.6
Cpe09g00742	CCT	1	890	B3 DNA Binding Superfamily	AT1G30330	68.1	0.0e+00	1092.0
Cpe19g01157	CCT,CST	29	836	B3 DNA Binding Superfamily	AT1G30330	62.1	1.3e-286	983.0
Cpe01g01963	.	13	835	B3 DNA Binding Superfamily	AT1G30330	53.9	3.2e-237	818.9
Cpe13g00526	.	7	831	B3 DNA Binding Superfamily	AT1G30330	54.8	2.6e-231	799.3
Cpe14g00449	.	19	374	B3 DNA Binding Superfamily	AT1G30330	53.2	6.3e-100	362.8
Cpe17g01020	.	7	352	B3 DNA Binding Superfamily	AT1G30330	53.5	1.8e-99	361.3
Cpe01g00608	.	27	379	B3 DNA Binding Superfamily	AT1G30330	52.8	5.3e-99	359.8
Cpe05g00788	.	24	340	B3 DNA Binding Superfamily	AT1G30330	52.8	6.5e-89	326.2
Cpe20g00544	CCT	1	196	B3 DNA Binding Superfamily	AT1G30330	68.5	1.2e-66	252.3
Cpe20g00545	CCT,CST	4	484	B3 DNA Binding Superfamily	AT5G20730	59.1	7.9e-153	538.9
Cpe10g00065	CCT	4	468	B3 DNA Binding Superfamily	AT5G20730	59.9	1.0e-152	538.5
Cpe09g00742	CCT	4	459	B3 DNA Binding Superfamily	AT5G20730	53.9	1.5e-132	471.5
Cpe01g01963	.	13	491	B3 DNA Binding Superfamily	AT5G20730	50.2	6.3e-126	449.5
Cpe13g00526	.	45	485	B3 DNA Binding Superfamily	AT5G20730	50.9	2.5e-122	437.6
Cpe18g00939	.	45	395	B3 DNA Binding Superfamily	AT5G20730	52.6	1.3e-102	372.1
Cpe14g00449	.	19	355	B3 DNA Binding Superfamily	AT5G20730	50.4	1.0e-91	335.9
Cpe01g01963	.	110	802	B3 DNA Binding Superfamily	AT5G37020	60.8	1.3e-230	796.6
Cpe13g00526	.	127	799	B3 DNA Binding Superfamily	AT5G37020	58.4	9.1e-224	773.9
Cpe10g00065	CCT	97	849	B3 DNA Binding Superfamily	AT5G37020	53.9	4.8e-201	698.4
Cpe20g00545	CCT,CST	97	842	B3 DNA Binding Superfamily	AT5G37020	52.4	4.0e-187	652.1
Cpe17g01020	.	125	352	B3 DNA Binding Superfamily	AT5G37020	56.5	5.6e-72	269.6
Cpe19g01041	CCT	151	397	B3 DNA Binding Superfamily	AT5G37020	51.4	6.8e-70	262.7
Cpe10g00168	CCT	139	397	B3 DNA Binding Superfamily	AT5G37020	51.1	5.8e-69	259.6
Cpe05g00788	.	121	340	B3 DNA Binding Superfamily	AT5G37020	54.0	2.5e-64	244.2
Cpe01g00608	.	1	699	B3 DNA Binding Superfamily	AT4G23980	56.1	2.1e-200	696.0
Cpe14g00449	.	1	727	B3 DNA Binding Superfamily	AT4G23980	53.6	6.4e-197	684.5
Cpe17g01020	.	17	663	B3 DNA Binding Superfamily	AT4G23980	57.6	3.0e-194	675.6
Cpe05g00788	.	18	633	B3 DNA Binding Superfamily	AT4G23980	54.4	4.2e-180	628.6
Cpe13g00097	.	18	631	B3 DNA Binding Superfamily	AT4G23980	51.9	6.5e-165	578.2
Cpe02g00083	CCT	46	379	B3 DNA Binding Superfamily	AT4G23980	52.5	1.7e-96	350.9
Cpe10g00065	CCT	20	376	B3 DNA Binding Superfamily	AT4G23980	51.3	2.2e-96	350.5
Cpe11g00650	.	27	382	B3 DNA Binding Superfamily	AT4G23980	50.1	1.4e-95	347.8
Cpe18g00939	.	36	845	B3 DNA Binding Superfamily	AT5G62000	62.8	2.0e-286	982.2
Cpe01g02387	.	35	776	B3 DNA Binding Superfamily	AT5G62000	50.9	1.6e-219	760.0
Cpe11g00650	.	13	401	B3 DNA Binding Superfamily	AT5G62000	51.3	1.3e-107	388.3
Cpe12g01066	CCT	45	687	B3 DNA Binding Superfamily	AT3G24650	51.4	2.1e-111	400.6
Cpe01g01959	.	3	201	B3 DNA Binding Superfamily	AT3G26790	55.7	2.8e-60	229.6
Cpe13g00523	.	71	243	B3 DNA Binding Superfamily	AT3G26790	52.0	6.4e-49	191.8
Cpe11g01202	CST	3	847	B3 DNA Binding Superfamily	AT1G19220	51.6	5.9e-283	971.1
Cpe07g01081	CST	1	880	B3 DNA Binding Superfamily	AT1G19220	50.9	4.7e-272	934.9
Cpe18g00939	.	45	410	B3 DNA Binding Superfamily	AT1G19220	51.6	2.9e-104	377.5
Cpe01g00608	.	10	360	B3 DNA Binding Superfamily	AT1G19220	50.4	4.2e-95	347.1
Cpe19g01041	CCT	46	380	B3 DNA Binding Superfamily	AT1G19220	50.1	4.9e-88	323.6
Cpe02g00083	CCT	20	930	B3 DNA Binding Superfamily	AT1G19850	60.6	1.7e-288	989.2
Cpe06g00079	CCT	18	874	B3 DNA Binding Superfamily	AT1G19850	60.2	4.7e-270	927.9
Cpe01g00608	.	18	379	B3 DNA Binding Superfamily	AT1G19850	51.2	3.9e-99	360.1
Cpe10g00065	CCT	1	887	B3 DNA Binding Superfamily	AT1G30330	68.6	0.0e+00	1188.3
Cpe20g00545	CCT,CST	1	879	B3 DNA Binding Superfamily	AT1G30330	69.4	0.0e+00	1165.6
Cpe09g00742	CCT	1	890	B3 DNA Binding Superfamily	AT1G30330	68.1	0.0e+00	1092.0
Cpe19g01157	CCT,CST	29	836	B3 DNA Binding Superfamily	AT1G30330	62.1	1.3e-286	983.0
Cpe01g01963	.	13	835	B3 DNA Binding Superfamily	AT1G30330	53.9	3.2e-237	818.9
Cpe13g00526	.	7	831	B3 DNA Binding Superfamily	AT1G30330	54.8	2.6e-231	799.3
Cpe14g00449	.	19	374	B3 DNA Binding Superfamily	AT1G30330	53.2	6.3e-100	362.8
Cpe17g01020	.	7	352	B3 DNA Binding Superfamily	AT1G30330	53.5	1.8e-99	361.3
Cpe01g00608	.	27	379	B3 DNA Binding Superfamily	AT1G30330	52.8	5.3e-99	359.8
Cpe05g00788	.	24	340	B3 DNA Binding Superfamily	AT1G30330	52.8	6.5e-89	326.2
Cpe20g00544	CCT	1	196	B3 DNA Binding Superfamily	AT1G30330	68.5	1.2e-66	252.3
Cpe20g00545	CCT,CST	4	484	B3 DNA Binding Superfamily	AT5G20730	59.1	7.9e-153	538.9
Cpe10g00065	CCT	4	468	B3 DNA Binding Superfamily	AT5G20730	59.9	1.0e-152	538.5
Cpe09g00742	CCT	4	459	B3 DNA Binding Superfamily	AT5G20730	53.9	1.5e-132	471.5
Cpe01g01963	.	13	491	B3 DNA Binding Superfamily	AT5G20730	50.2	6.3e-126	449.5
Cpe13g00526	.	45	485	B3 DNA Binding Superfamily	AT5G20730	50.9	2.5e-122	437.6
Cpe18g00939	.	45	395	B3 DNA Binding Superfamily	AT5G20730	52.6	1.3e-102	372.1
Cpe14g00449	.	19	355	B3 DNA Binding Superfamily	AT5G20730	50.4	1.0e-91	335.9
Cpe01g01963	.	110	802	B3 DNA Binding Superfamily	AT5G37020	60.8	1.3e-230	796.6
Cpe13g00526	.	127	799	B3 DNA Binding Superfamily	AT5G37020	58.4	9.1e-224	773.9
Cpe10g00065	CCT	97	849	B3 DNA Binding Superfamily	AT5G37020	53.9	4.8e-201	698.4
Cpe20g00545	CCT,CST	97	842	B3 DNA Binding Superfamily	AT5G37020	52.4	4.0e-187	652.1
Cpe17g01020	.	125	352	B3 DNA Binding Superfamily	AT5G37020	56.5	5.6e-72	269.6
Cpe19g01041	CCT	151	397	B3 DNA Binding Superfamily	AT5G37020	51.4	6.8e-70	262.7
Cpe10g00168	CCT	139	397	B3 DNA Binding Superfamily	AT5G37020	51.1	5.8e-69	259.6
Cpe05g00788	.	121	340	B3 DNA Binding Superfamily	AT5G37020	54.0	2.5e-64	244.2
Cpe10g00168	CCT	150	443	B3 DNA Binding Superfamily	AT2G33860	65.3	1.5e-107	387.1
Cpe19g01041	CCT	150	435	B3 DNA Binding Superfamily	AT2G33860	64.5	4.8e-106	382.1
Cpe05g00832	.	168	451	B3 DNA Binding Superfamily	AT2G33860	57.3	1.7e-90	330.5
Cpe18g00939	.	149	438	B3 DNA Binding Superfamily	AT2G33860	50.7	4.0e-76	282.7
Cpe20g00545	CCT,CST	127	358	B3 DNA Binding Superfamily	AT2G33860	56.9	5.1e-71	265.8
Cpe10g00065	CCT	127	358	B3 DNA Binding Superfamily	AT2G33860	56.5	4.3e-70	262.7
Cpe01g00608	.	129	356	B3 DNA Binding Superfamily	AT2G33860	52.8	5.2e-68	255.8
Cpe11g00650	.	131	362	B3 DNA Binding Superfamily	AT2G33860	53.9	2.0e-67	253.8
Cpe14g00449	.	124	351	B3 DNA Binding Superfamily	AT2G33860	51.9	2.6e-67	253.4
Cpe02g00083	CCT	149	407	B3 DNA Binding Superfamily	AT2G33860	52.7	5.8e-67	252.3
Cpe17g01020	.	125	352	B3 DNA Binding Superfamily	AT2G33860	52.8	3.8e-66	249.6
Cpe05g00788	.	129	337	B3 DNA Binding Superfamily	AT2G33860	52.4	1.2e-59	228.0
Cpe05g00832	.	48	775	B3 DNA Binding Superfamily	AT5G60450	60.4	9.0e-246	847.0
Cpe16g00547	.	47	719	B3 DNA Binding Superfamily	AT5G60450	55.5	7.2e-219	757.7
Cpe08g01328	.	1	546	B3 DNA Binding Superfamily	AT1G59750	53.3	4.1e-170	595.5
Cpe17g01020	.	14	663	B3 DNA Binding Superfamily	AT1G59750	50.4	1.5e-169	593.6
Cpe01g00608	.	22	676	B3 DNA Binding Superfamily	AT1G59750	50.1	1.9e-159	560.1
Cpe11g00650	.	17	398	B3 DNA Binding Superfamily	AT1G59750	51.9	6.4e-107	385.6
Cpe10g00065	CCT	23	383	B3 DNA Binding Superfamily	AT1G59750	55.1	5.4e-106	382.5
Cpe20g00545	CCT,CST	23	396	B3 DNA Binding Superfamily	AT1G59750	53.4	5.4e-106	382.5
Cpe02g00083	CCT	42	379	B3 DNA Binding Superfamily	AT1G59750	51.6	4.6e-97	352.8
Cpe18g00939	.	36	845	B3 DNA Binding Superfamily	AT5G62000	62.8	2.0e-286	982.2
Cpe01g02387	.	35	776	B3 DNA Binding Superfamily	AT5G62000	50.9	1.6e-219	760.0
Cpe11g00650	.	13	401	B3 DNA Binding Superfamily	AT5G62000	51.3	1.3e-107	388.3
Cpe17g01020	.	14	678	B3 DNA Binding Superfamily	AT2G46530	54.9	7.0e-180	627.9
Cpe14g00449	.	13	724	B3 DNA Binding Superfamily	AT2G46530	51.6	4.2e-177	618.6
Cpe01g00608	.	18	696	B3 DNA Binding Superfamily	AT2G46530	52.5	7.5e-174	607.8
Cpe05g00788	.	18	632	B3 DNA Binding Superfamily	AT2G46530	53.8	5.2e-167	585.1
Cpe10g00065	CCT	1	368	B3 DNA Binding Superfamily	AT2G46530	51.9	8.7e-98	355.1
Cpe20g00545	CCT,CST	1	368	B3 DNA Binding Superfamily	AT2G46530	50.1	3.1e-95	346.7
Cpe17g01020	.	50	665	B3 DNA Binding Superfamily	AT3G61830	54.3	4.2e-168	588.6
Cpe01g00608	.	54	686	B3 DNA Binding Superfamily	AT3G61830	50.2	1.8e-158	556.6
Cpe05g00788	.	54	639	B3 DNA Binding Superfamily	AT3G61830	52.5	1.9e-149	526.6
Cpe20g00545	CCT,CST	51	364	B3 DNA Binding Superfamily	AT3G61830	51.4	2.4e-83	307.0
Cpe01g00608	.	1	699	B3 DNA Binding Superfamily	AT4G23980	56.1	2.1e-200	696.0
Cpe14g00449	.	1	727	B3 DNA Binding Superfamily	AT4G23980	53.6	6.4e-197	684.5
Cpe17g01020	.	17	663	B3 DNA Binding Superfamily	AT4G23980	57.6	3.0e-194	675.6
Cpe05g00788	.	18	633	B3 DNA Binding Superfamily	AT4G23980	54.4	4.2e-180	628.6
Cpe13g00097	.	18	631	B3 DNA Binding Superfamily	AT4G23980	51.9	6.5e-165	578.2
Cpe02g00083	CCT	46	379	B3 DNA Binding Superfamily	AT4G23980	52.5	1.7e-96	350.9
Cpe10g00065	CCT	20	376	B3 DNA Binding Superfamily	AT4G23980	51.3	2.2e-96	350.5
Cpe11g00650	.	27	382	B3 DNA Binding Superfamily	AT4G23980	50.1	1.4e-95	347.8
Cpe17g01020	.	20	224	B3 DNA Binding Superfamily	AT1G43950	56.1	1.5e-60	229.9
Cpe14g00449	.	14	223	B3 DNA Binding Superfamily	AT1G43950	55.0	3.7e-59	225.3
Cpe01g00608	.	13	228	B3 DNA Binding Superfamily	AT1G43950	53.4	1.9e-58	223.0
Cpe05g00788	.	24	228	B3 DNA Binding Superfamily	AT1G43950	55.3	1.9e-58	223.0
Cpe18g00939	.	43	248	B3 DNA Binding Superfamily	AT1G43950	52.4	1.3e-56	216.9
Cpe01g02387	.	42	209	B3 DNA Binding Superfamily	AT1G43950	51.8	1.7e-43	173.3
Cpe16g00530	.	7	648	B3 DNA Binding Superfamily	AT2G28350	59.6	5.0e-208	721.5
Cpe05g00816	.	17	701	B3 DNA Binding Superfamily	AT2G28350	57.5	1.6e-206	716.5
Cpe19g00413	CCT,ECH	13	677	B3 DNA Binding Superfamily	AT2G28350	55.3	2.1e-198	689.5
Cpe01g02236	CCT,ECH	16	674	B3 DNA Binding Superfamily	AT2G28350	52.7	8.6e-176	614.4
Cpe13g00800	CCT,ECH	16	675	B3 DNA Binding Superfamily	AT2G28350	51.1	1.5e-172	603.6
Cpe10g00219	CCT,ECH	19	586	B3 DNA Binding Superfamily	AT2G28350	53.1	3.7e-171	599.0
Cpe19g00413	CCT,ECH	15	679	B3 DNA Binding Superfamily	AT4G30080	59.8	3.8e-216	748.4
Cpe05g00816	.	18	702	B3 DNA Binding Superfamily	AT4G30080	57.7	4.4e-212	734.9
Cpe16g00530	.	8	650	B3 DNA Binding Superfamily	AT4G30080	58.3	7.0e-210	727.6
Cpe01g02236	CCT,ECH	5	680	B3 DNA Binding Superfamily	AT4G30080	56.8	5.7e-204	708.0
Cpe13g00800	CCT,ECH	5	678	B3 DNA Binding Superfamily	AT4G30080	54.7	2.9e-200	695.7
Cpe10g00219	CCT,ECH	7	587	B3 DNA Binding Superfamily	AT4G30080	54.9	2.3e-181	632.9
Cpe05g00757	.	53	167	B3 DNA Binding Superfamily	AT1G01030	81.0	1.0e-52	204.5
Cpe17g00919	.	98	211	B3 DNA Binding Superfamily	AT1G01030	80.0	6.7e-52	201.8
Cpe14g00507	CCT,ECH	28	142	B3 DNA Binding Superfamily	AT1G01030	74.8	9.0e-49	191.4
Cpe08g00992	CCT,ECH	33	149	B3 DNA Binding Superfamily	AT1G01030	60.0	4.6e-37	152.5
Cpe01g01350	.	174	282	B3 DNA Binding Superfamily	AT1G01030	66.1	6.1e-37	152.1
Cpe09g00275	CST	167	279	B3 DNA Binding Superfamily	AT1G01030	62.9	1.8e-36	150.6
Cpe09g00275	CST	11	338	B3 DNA Binding Superfamily	AT1G25560	61.4	1.2e-104	377.1
Cpe01g01350	.	22	339	B3 DNA Binding Superfamily	AT1G25560	61.9	2.8e-104	375.9
Cpe01g01766	CST	40	326	B3 DNA Binding Superfamily	AT1G25560	62.6	1.3e-93	340.5
Cpe13g00343	.	36	332	B3 DNA Binding Superfamily	AT1G25560	60.9	6.4e-93	338.2
Cpe08g00992	CCT,ECH	36	164	B3 DNA Binding Superfamily	AT1G25560	60.6	3.5e-38	156.4
Cpe17g00919	.	92	208	B3 DNA Binding Superfamily	AT1G25560	61.6	2.9e-37	153.3
Cpe05g00757	.	54	162	B3 DNA Binding Superfamily	AT1G25560	66.9	6.5e-37	152.1
Cpe04g00274	CCT,ECH	66	307	B3 DNA Binding Superfamily	AT3G19184	60.7	6.7e-69	258.1
Cpe15g00494	.	1	217	B3 DNA Binding Superfamily	AT3G19184	65.9	1.1e-68	257.3
Cpe07g00470	.	275	484	B3 DNA Binding Superfamily	AT3G19184	53.5	4.1e-50	195.7
Cpe07g00470	.	320	482	B3 DNA Binding Superfamily	AT5G42700	57.6	7.7e-50	194.1
Cpe15g00494	.	62	217	B3 DNA Binding Superfamily	AT5G42700	57.0	3.1e-43	172.2
Cpe04g00274	CCT,ECH	127	292	B3 DNA Binding Superfamily	AT5G42700	54.5	1.6e-42	169.9
Cpe05g01232	.	16	394	B3 DNA Binding Superfamily	AT3G18990	55.1	1.3e-104	377.1
Cpe16g00215	.	62	425	B3 DNA Binding Superfamily	AT3G18990	58.2	3.2e-103	372.5

Syn-Orthogroups

Select	Orthogroup	Bda	Bhi	Blo	Bma	Bpe	Cam	Car	Cco	Cec	Chy	Cla	Clacu	Cma	Cme	Cmetu	Cmo	Cmu	Cone	Cpe	Cre	Csa	HCH	Hepe	Lac	Lcy	Lsi	Mch	Sed	Tan	Vvi	Total
	OG0000766	2	4	1	1	2	3	5	3	3	3	3	3	5	3	3	5	3	4	5	3	3	3	3	3	3	3	2	5	3	2	94

Regulatory proteins

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	50844	PF02309	AUX_IAA	2.00E-10	CL0072	Cpe	TF

Transcriptome

Select	Gene	Chr	Type	da1	da2	da3	da4	da5	da6	da7	da8	da9	da10
	Cpe17g01020	Cpe_Chr17	FPKM	10.604167	10.850013	11.368314	12.276613	9.706988	6.821046	8.48692	9.7503	9.02836	10.489028