Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe18g00029 | ATGGAGCACTTGTTCATGAAGCTCAAGAACTGGAAGAACTCTGAAAATGCTTCTGCTGCTGAAGCAATGGCAAAGTCTGCAAAGAAGAAGGATTTGATCATTCGTGGCTCCGGGAGTATACATATCGACGGTTCGAGCAACTTCGTCTCGAGTTTCTCGAAACGGGAGGAGGCCGAGAGGATAGCACAATGCAACGGGCGGGTTTTCTGCTTGCAAGATGAACCCGGGACGCACCGTATTTGGTTGCCGAATGGGGAAACGCCGGGGCTGTCATTGTCGAGATCGTTCGGAGATTTTTGTGTTAAGCATTTTGGTCTCATTTCTATGCCTGATGTAACACAAAGAAGTGTAACCAACCAAGACTTGTTTGTTGTACTTGCAACAGATGGGATTTGGGACGTGGTGTCGAATCAAGAGGCGGTACAAATCGTACATTCGACCGTCAATAGAGAAAAATCAGCTCGACATCTGGTCGATTATGCTACCGGTGCATGGAAGCGGAGGAGGCCGGGAATTGCAGCGGACGACATGTCGGTTGTCGTCCTCTTTCTCCATTCTTCACCTTTGCATCATCAACCTCTTGCTCTTATGTAG | 594 | 48.32 | MEHLFMKLKNWKNSENASAAEAMAKSAKKKDLIIRGSGSIHIDGSSNFVSSFSKREEAERIAQCNGRVFCLQDEPGTHRIWLPNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDLFVVLATDGIWDVVSNQEAVQIVHSTVNREKSARHLVDYATGAWKRRRPGIAADDMSVVVLFLHSSPLHHQPLALM | 197 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 539064 | 542585 | + | Cp4.1LG18g00320.1 | Cpe18g00029 | 484490 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe18g00029 | 197 | SUPERFAMILY | PP2C-like | 52 | 185 | IPR036457 | - | |
Cpe18g00029 | 197 | SMART | PP2C_4 | 6 | 182 | IPR001932 | - | |
Cpe18g00029 | 197 | PANTHER | ALPHABET, ISOFORM E-RELATED | 56 | 192 | - | - | |
Cpe18g00029 | 197 | PANTHER | PROTEIN PHOSPHATASE 2C 41-RELATED | 56 | 192 | - | - | |
Cpe18g00029 | 197 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 184 | IPR001932 | - | |
Cpe18g00029 | 197 | Pfam | Protein phosphatase 2C | 53 | 161 | IPR001932 | - | |
Cpe18g00029 | 197 | CDD | PP2Cc | 51 | 184 | IPR001932 | - | |
Cpe18g00029 | 197 | Gene3D | - | 48 | 186 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe18g00029 | Cpe-Chr18:539064 | Cpe12g00295 | Cpe-Chr12:1959552 | 1.16E-58 | dispersed | |
Cpe18g00029 | Cpe-Chr18:539064 | Cpe11g00894 | Cpe-Chr11:7210013 | 2.32E-67 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe18g00029 | - | - | bhj:120072181 | 244.973 |