Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe18g00031 | ATGGCGTCTTTCTTAAAGCCAGAGAATGCTTTAAAACGAGCTGAAGAGCTGATAAATGTTGGCCAGAAGCAAGATGCCTTGCAAGCCCTTCACGATCTTATCACTTCAAAGAAATATCGAGCATGGCAGAAACCTCTTGAGAGGATTATGTTTAAGTATGTTGAGCTCTGTGTGGACATGAGGAAAGGAAGGTTTGCTAAGGATGGTTTAATTCAGTACCGTATTGTTTGCCAGCAAGTCAATGTTACTTCTTTAGAGGAAGTAATCAAGCACTTTATGCATCTTTCCACTGAGAAGGCAGAGCAGGCTCGTAGCCAAGCTCAAGCTTTAGAAGAAGCTCTGGACGTTGATGATTTGGAAGCTGATAAAAGGCCAGAAGATCTGATGCTTAGTTATGTCAGTGGTGAAAAGGGAAAGGATAGATCTGATCGTGAACTTGTTACCCCTTGGTTTAAATTTCTGTGGGAGACATATCGTACAGTTCTTGAGATACTTAGGAATAACTCAAAGCTGGAGGCACTTTATGCGATGACAGCCCATCGTGCCTTCCAGTTCTGTAAGACGTATAAAAGAACAACAGAATTTCGCAGATTATGTGAAATTATCAGAAATCATCTTGCTAATCTCAACAAGTATAGGGACCAAAGAGATCGACCCGACATTTCTACTCCAGAGACTTTGCAGTTGTACCTTGACACTAGATTTGAACAACTGAAAGTTGCCACAGAGCTGGAGCTCTGGCAGGAAGCTTTTCGTTCGGTGGAAGATATTCATGGTTTGATGTGCATGGTGAAGAAAACACCTAAACCATCCTTGATGGTTGTTTATTACGTCAAATTAACAGAGATATTCTGGATATCAAAGAGCAATCTTTATCATGCCTATGCTTGGCTTAAACTTTTCTCCCTTCAGAAGAGTTTCAACAAAAATTTAAGCCAGAAGGATTTGCAGCTGATAGCTTCATCTGTTCTTTTAGCAGCTCTTGCTGTGTCCCCCTATGACTCTAAACACGGTGCTTCTCATTTAGAACTTGAACATGAGAAAGAGCGGAATTTGAGGATGGCTAATCTTATAGGGTTCAATTTAGACTCCAAACTTGAAAGTAGAGATGTGCTTTCAAGAGCGAATCTTCTTTCTGAACTGGTGTCTAAGGGAGTCCTGAGCTGCGCAACTCAGGAAGTTAAAGATCTCTATCATCTTTTGGAGCATGAATTTTTCCCTCTTGATCTTGCAACAAAATTGCAACCTTTATTAAACAAAATATCAAAGCTTGGAGGCAAGCTTTCATCAGCTTCATCTGTCCCTGAAGTGCAATTATCCCAGTATGTTCCGGCTCTTGAAAAACTTGCTACCCTGAGGTTGCTTCAGCAGGTCTCCAAGGTGTATCAGACTATGAAAATTGAGAGTCTATCTCAGATGATCCCATTTTTTGATTTCTCAGCCGTGGAGAAAATATCAGTTGATGCAGTTAAACAAAATTTCATTGCCATGAAAGTTGATCATTCAAGGAACATTGTGTTATTTGGCACTTTGGGTATTGAATCAGATGGGCTTCGGGACCACCTGGCTGTTCTCGCTGAATCCTTAAACAAGGCAAGAGCTATGATCTATCCTCCAGTTAGGAAAGTATCAAAAACAGGTGAGATACTGCCTGATTTAGCAGATATTGTCGATAAGGAACACAAGAGGCTGCTTGCTCGGAAATCAATAATTGAGAAAAGGAAGGAAGAGCAGGAACGACAACTTTTGGAAATGGAACGTGAGGAGGAATCAAGGAGGTTAAAATTACTGAAGATAACTGAAGAGGCCGAGCAGAAGCGCCTAGCTGCAGAATATGAACAAAGGAAAAACCAACGCCTGCGTAGGGAAATGGAAGAGCGAGAACTTGAAGAAGCACAGGCTTTACTTCAGGAAGCTGAAAAGCGTGTTGGTAAAAAGAAGGGAAGCAGGAAGCCGGTTCTTGACTCTGAAAAGATGACGAAACAAACTTTAATGCAATTGGCCCTTACGGAACAATTAAGGGAGAGGCAGGAAATGGAGAAGAAATTGCAAAAGCTAGCCAAAACTATGGATTATCTAGAAAGGGCAAAAAGAGAGGAGGCTGCAACTTTAATTGAAGCTGCATTTCAGCAACGTTTGCTCGAAGAGCGATTGATTCATGAACGCGATCAGCAGTTGGAGGTTGAGTTAAGCAAGCAACGCCACGAAGGTGATCTCAAGGAGAAGAATCGATTGGCTAGAATGTTGGAGAGTAAGAAAATTTTCCAAGAAAGAGTCATTAATCTTCGCCAAGAGGAGTTCAGCAGACGCAGAGTTGAGAGAGAAGAACAAATCAGGCAAATAATTCATGCTCGGAAAGCAGAAAGGGATGCTAAGAGGAAGAAAATCTTTTATGAACGTGAGGAGGAATCAAGGAGGTTAAAATTACTGAAGATAACTGAAGAGGCCGAGCAGAAGCGCCTAGCTGCAGAATATGAACAAAGGAAAAACCAACGCCTTCGTAGGGAAATGGAAGAGCGAGAACTTGAAGAAGCACAGGCTTTACTTCAGGAAGCTGAAAAGCGTGTTGGTAAAAAGAAGGGAAGCAGGAAGCCGGTTCTTGACTCTGAAAAGATGACGAAACAAACTTTAATGCAATTGGCCCTTACGGAACAATTAAGGGAGAGGCAGGAAATGGAGAAGAAATTGCAAAAGCTAGCCAAAACTATGGATTATCTAGAAAGGGCAAAAAGAGAGGAGGCTGCAACTTTAATTGAAGCTGCATTTCAGCAACGTTTGCTCGAAGAGCGATTGATTCATGAACGCGATCAGCAGTTGGAGGTTGAGTTAAGCAAGCAACGCCACGAAGGTGATCTCAAGGAGAAGAATCGATTGGCTAGAATGTTGGAGAGTAAGAAAATTTTCCAAGAAAGAGTCATTAATCTTCGCCAAGAGGAGTTCAGCAGACGCAGAGTTGAGAGAGAAGAACAAATCAGGCAAATAATTCATGCTCGGAAAGCAGAAAGGGATGCTAAGAGGAAGAAAATCTTTTATGTAAGGCGTGAGGAGGAGAGGATTCGAATTTTACGCGAAGAGGAGGAAGCACGCAAACGTGAAGAGGCCGAGAGGAGAAAGAGGGAAGAAGCTGAACGCAAGGCTAAATTGGATGAGATTGCTGAGAAGCAGAGACAGAGGGAGCGAGAACTGGAAGAAAAGGAAAGGCGGCGGAAAGAAATGCTGTTTGGTGGTGGGGCACCAGCTGATGCACCTTCTAGACCTCATGTTGCTCCTGTTTCTCAACCTCTGGAGTCCGGAGCTGCTGCTGCTCCTGCTGCTGCAGCTGCTGCTGCCGCCGCCCCAGCCCCAGCGAAGTATGTGCCTAGGTTTCGACGGACTGAAAGCTCTAGCCCTAATGCACCAGCACCTGAATCTGATCGATGGGGAAGCAGCAGGTCCGATAATCGACCATCTCAACCAGACAGCTGGCGCAGTGATGAACGCAGATCTGCTTTCGGAAGTTCAAGGTCATCTTGGTCGTCATCCCGAGGTCCTAATCGTGGTAGCTCGGATCGCTGA | 3555 | 43.63 | MASFLKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDMRKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKTYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDISTPETLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISKSNLYHAYAWLKLFSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGFNLDSKLESRDVLSRANLLSELVSKGVLSCATQEVKDLYHLLEHEFFPLDLATKLQPLLNKISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFSAVEKISVDAVKQNFIAMKVDHSRNIVLFGTLGIESDGLRDHLAVLAESLNKARAMIYPPVRKVSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKITEEAEQKRLAAEYEQRKNQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKMTKQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERLIHERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVINLRQEEFSRRRVEREEQIRQIIHARKAERDAKRKKIFYEREEESRRLKLLKITEEAEQKRLAAEYEQRKNQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKMTKQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERLIHERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVINLRQEEFSRRRVEREEQIRQIIHARKAERDAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAEKQRQRERELEEKERRRKEMLFGGGAPADAPSRPHVAPVSQPLESGAAAAPAAAAAAAAAPAPAKYVPRFRRTESSSPNAPAPESDRWGSSRSDNRPSQPDSWRSDERRSAFGSSRSSWSSSRGPNRGSSDR | 1184 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 552463 | 563783 | + | Cp4.1LG18g00300.1 | Cpe18g00031 | 484492 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe18g00031 | 1184 | Coils | Coil | 669 | 699 | - | - | |
Cpe18g00031 | 1184 | Gene3D | - | 363 | 494 | - | - | |
Cpe18g00031 | 1184 | Gene3D | - | 269 | 343 | - | - | |
Cpe18g00031 | 1184 | Coils | Coil | 882 | 912 | - | - | |
Cpe18g00031 | 1184 | Pfam | PCI domain | 374 | 509 | IPR000717 | - | |
Cpe18g00031 | 1184 | Coils | Coil | 603 | 649 | - | - | |
Cpe18g00031 | 1184 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A | 1 | 803 | - | - | |
Cpe18g00031 | 1184 | Coils | Coil | 732 | 752 | - | - | |
Cpe18g00031 | 1184 | MobiDBLite | consensus disorder prediction | 1164 | 1184 | - | - | |
Cpe18g00031 | 1184 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT | 1 | 803 | IPR027512 | GO:0005852 | |
Cpe18g00031 | 1184 | MobiDBLite | consensus disorder prediction | 1124 | 1150 | - | - | |
Cpe18g00031 | 1184 | SMART | PINT_4 | 441 | 532 | IPR000717 | - | |
Cpe18g00031 | 1184 | MobiDBLite | consensus disorder prediction | 1028 | 1074 | - | - | |
Cpe18g00031 | 1184 | Gene3D | UVR domain | 217 | 268 | - | - | |
Cpe18g00031 | 1184 | Coils | Coil | 561 | 600 | - | - | |
Cpe18g00031 | 1184 | ProSiteProfiles | PCI domain profile. | 316 | 513 | IPR000717 | - | |
Cpe18g00031 | 1184 | Coils | Coil | 945 | 965 | - | - | |
Cpe18g00031 | 1184 | MobiDBLite | consensus disorder prediction | 1028 | 1184 | - | - | |
Cpe18g00031 | 1184 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT | 799 | 1126 | IPR027512 | GO:0005852 | |
Cpe18g00031 | 1184 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 441 | 532 | - | - | |
Cpe18g00031 | 1184 | Coils | Coil | 816 | 862 | - | - | |
Cpe18g00031 | 1184 | Coils | Coil | 93 | 120 | - | - | |
Cpe18g00031 | 1184 | Coils | Coil | 1012 | 1071 | - | - | |
Cpe18g00031 | 1184 | Hamap | Eukaryotic translation initiation factor 3 subunit A [EIF3A]. | 1 | 898 | IPR027512 | GO:0005852 | |
Cpe18g00031 | 1184 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A | 799 | 1126 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe18g00031 | Cpe-Chr18:552463 | Cpe04g00235 | Cpe-Chr4:2879879 | 6.79E-147 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe18g00031 | K03254 | - | csv:101209344 | 1391.33 |