Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00031 ATGGCGTCTTTCTTAAAGCCAGAGAATGCTTTAAAACGAGCTGAAGAGCTGATAAATGTTGGCCAGAAGCAAGATGCCTTGCAAGCCCTTCACGATCTTATCACTTCAAAGAAATATCGAGCATGGCAGAAACCTCTTGAGAGGATTATGTTTAAGTATGTTGAGCTCTGTGTGGACATGAGGAAAGGAAGGTTTGCTAAGGATGGTTTAATTCAGTACCGTATTGTTTGCCAGCAAGTCAATGTTACTTCTTTAGAGGAAGTAATCAAGCACTTTATGCATCTTTCCACTGAGAAGGCAGAGCAGGCTCGTAGCCAAGCTCAAGCTTTAGAAGAAGCTCTGGACGTTGATGATTTGGAAGCTGATAAAAGGCCAGAAGATCTGATGCTTAGTTATGTCAGTGGTGAAAAGGGAAAGGATAGATCTGATCGTGAACTTGTTACCCCTTGGTTTAAATTTCTGTGGGAGACATATCGTACAGTTCTTGAGATACTTAGGAATAACTCAAAGCTGGAGGCACTTTATGCGATGACAGCCCATCGTGCCTTCCAGTTCTGTAAGACGTATAAAAGAACAACAGAATTTCGCAGATTATGTGAAATTATCAGAAATCATCTTGCTAATCTCAACAAGTATAGGGACCAAAGAGATCGACCCGACATTTCTACTCCAGAGACTTTGCAGTTGTACCTTGACACTAGATTTGAACAACTGAAAGTTGCCACAGAGCTGGAGCTCTGGCAGGAAGCTTTTCGTTCGGTGGAAGATATTCATGGTTTGATGTGCATGGTGAAGAAAACACCTAAACCATCCTTGATGGTTGTTTATTACGTCAAATTAACAGAGATATTCTGGATATCAAAGAGCAATCTTTATCATGCCTATGCTTGGCTTAAACTTTTCTCCCTTCAGAAGAGTTTCAACAAAAATTTAAGCCAGAAGGATTTGCAGCTGATAGCTTCATCTGTTCTTTTAGCAGCTCTTGCTGTGTCCCCCTATGACTCTAAACACGGTGCTTCTCATTTAGAACTTGAACATGAGAAAGAGCGGAATTTGAGGATGGCTAATCTTATAGGGTTCAATTTAGACTCCAAACTTGAAAGTAGAGATGTGCTTTCAAGAGCGAATCTTCTTTCTGAACTGGTGTCTAAGGGAGTCCTGAGCTGCGCAACTCAGGAAGTTAAAGATCTCTATCATCTTTTGGAGCATGAATTTTTCCCTCTTGATCTTGCAACAAAATTGCAACCTTTATTAAACAAAATATCAAAGCTTGGAGGCAAGCTTTCATCAGCTTCATCTGTCCCTGAAGTGCAATTATCCCAGTATGTTCCGGCTCTTGAAAAACTTGCTACCCTGAGGTTGCTTCAGCAGGTCTCCAAGGTGTATCAGACTATGAAAATTGAGAGTCTATCTCAGATGATCCCATTTTTTGATTTCTCAGCCGTGGAGAAAATATCAGTTGATGCAGTTAAACAAAATTTCATTGCCATGAAAGTTGATCATTCAAGGAACATTGTGTTATTTGGCACTTTGGGTATTGAATCAGATGGGCTTCGGGACCACCTGGCTGTTCTCGCTGAATCCTTAAACAAGGCAAGAGCTATGATCTATCCTCCAGTTAGGAAAGTATCAAAAACAGGTGAGATACTGCCTGATTTAGCAGATATTGTCGATAAGGAACACAAGAGGCTGCTTGCTCGGAAATCAATAATTGAGAAAAGGAAGGAAGAGCAGGAACGACAACTTTTGGAAATGGAACGTGAGGAGGAATCAAGGAGGTTAAAATTACTGAAGATAACTGAAGAGGCCGAGCAGAAGCGCCTAGCTGCAGAATATGAACAAAGGAAAAACCAACGCCTGCGTAGGGAAATGGAAGAGCGAGAACTTGAAGAAGCACAGGCTTTACTTCAGGAAGCTGAAAAGCGTGTTGGTAAAAAGAAGGGAAGCAGGAAGCCGGTTCTTGACTCTGAAAAGATGACGAAACAAACTTTAATGCAATTGGCCCTTACGGAACAATTAAGGGAGAGGCAGGAAATGGAGAAGAAATTGCAAAAGCTAGCCAAAACTATGGATTATCTAGAAAGGGCAAAAAGAGAGGAGGCTGCAACTTTAATTGAAGCTGCATTTCAGCAACGTTTGCTCGAAGAGCGATTGATTCATGAACGCGATCAGCAGTTGGAGGTTGAGTTAAGCAAGCAACGCCACGAAGGTGATCTCAAGGAGAAGAATCGATTGGCTAGAATGTTGGAGAGTAAGAAAATTTTCCAAGAAAGAGTCATTAATCTTCGCCAAGAGGAGTTCAGCAGACGCAGAGTTGAGAGAGAAGAACAAATCAGGCAAATAATTCATGCTCGGAAAGCAGAAAGGGATGCTAAGAGGAAGAAAATCTTTTATGAACGTGAGGAGGAATCAAGGAGGTTAAAATTACTGAAGATAACTGAAGAGGCCGAGCAGAAGCGCCTAGCTGCAGAATATGAACAAAGGAAAAACCAACGCCTTCGTAGGGAAATGGAAGAGCGAGAACTTGAAGAAGCACAGGCTTTACTTCAGGAAGCTGAAAAGCGTGTTGGTAAAAAGAAGGGAAGCAGGAAGCCGGTTCTTGACTCTGAAAAGATGACGAAACAAACTTTAATGCAATTGGCCCTTACGGAACAATTAAGGGAGAGGCAGGAAATGGAGAAGAAATTGCAAAAGCTAGCCAAAACTATGGATTATCTAGAAAGGGCAAAAAGAGAGGAGGCTGCAACTTTAATTGAAGCTGCATTTCAGCAACGTTTGCTCGAAGAGCGATTGATTCATGAACGCGATCAGCAGTTGGAGGTTGAGTTAAGCAAGCAACGCCACGAAGGTGATCTCAAGGAGAAGAATCGATTGGCTAGAATGTTGGAGAGTAAGAAAATTTTCCAAGAAAGAGTCATTAATCTTCGCCAAGAGGAGTTCAGCAGACGCAGAGTTGAGAGAGAAGAACAAATCAGGCAAATAATTCATGCTCGGAAAGCAGAAAGGGATGCTAAGAGGAAGAAAATCTTTTATGTAAGGCGTGAGGAGGAGAGGATTCGAATTTTACGCGAAGAGGAGGAAGCACGCAAACGTGAAGAGGCCGAGAGGAGAAAGAGGGAAGAAGCTGAACGCAAGGCTAAATTGGATGAGATTGCTGAGAAGCAGAGACAGAGGGAGCGAGAACTGGAAGAAAAGGAAAGGCGGCGGAAAGAAATGCTGTTTGGTGGTGGGGCACCAGCTGATGCACCTTCTAGACCTCATGTTGCTCCTGTTTCTCAACCTCTGGAGTCCGGAGCTGCTGCTGCTCCTGCTGCTGCAGCTGCTGCTGCCGCCGCCCCAGCCCCAGCGAAGTATGTGCCTAGGTTTCGACGGACTGAAAGCTCTAGCCCTAATGCACCAGCACCTGAATCTGATCGATGGGGAAGCAGCAGGTCCGATAATCGACCATCTCAACCAGACAGCTGGCGCAGTGATGAACGCAGATCTGCTTTCGGAAGTTCAAGGTCATCTTGGTCGTCATCCCGAGGTCCTAATCGTGGTAGCTCGGATCGCTGA 3555 43.63 MASFLKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDMRKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKTYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDISTPETLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISKSNLYHAYAWLKLFSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGFNLDSKLESRDVLSRANLLSELVSKGVLSCATQEVKDLYHLLEHEFFPLDLATKLQPLLNKISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFSAVEKISVDAVKQNFIAMKVDHSRNIVLFGTLGIESDGLRDHLAVLAESLNKARAMIYPPVRKVSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKITEEAEQKRLAAEYEQRKNQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKMTKQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERLIHERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVINLRQEEFSRRRVEREEQIRQIIHARKAERDAKRKKIFYEREEESRRLKLLKITEEAEQKRLAAEYEQRKNQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKMTKQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERLIHERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVINLRQEEFSRRRVEREEQIRQIIHARKAERDAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAEKQRQRERELEEKERRRKEMLFGGGAPADAPSRPHVAPVSQPLESGAAAAPAAAAAAAAAPAPAKYVPRFRRTESSSPNAPAPESDRWGSSRSDNRPSQPDSWRSDERRSAFGSSRSSWSSSRGPNRGSSDR 1184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 552463 563783 + Cp4.1LG18g00300.1 Cpe18g00031 484492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00031 1184 Coils Coil 669 699 - -
Cpe18g00031 1184 Gene3D - 363 494 - -
Cpe18g00031 1184 Gene3D - 269 343 - -
Cpe18g00031 1184 Coils Coil 882 912 - -
Cpe18g00031 1184 Pfam PCI domain 374 509 IPR000717 -
Cpe18g00031 1184 Coils Coil 603 649 - -
Cpe18g00031 1184 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 803 - -
Cpe18g00031 1184 Coils Coil 732 752 - -
Cpe18g00031 1184 MobiDBLite consensus disorder prediction 1164 1184 - -
Cpe18g00031 1184 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 803 IPR027512 GO:0005852
Cpe18g00031 1184 MobiDBLite consensus disorder prediction 1124 1150 - -
Cpe18g00031 1184 SMART PINT_4 441 532 IPR000717 -
Cpe18g00031 1184 MobiDBLite consensus disorder prediction 1028 1074 - -
Cpe18g00031 1184 Gene3D UVR domain 217 268 - -
Cpe18g00031 1184 Coils Coil 561 600 - -
Cpe18g00031 1184 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Cpe18g00031 1184 Coils Coil 945 965 - -
Cpe18g00031 1184 MobiDBLite consensus disorder prediction 1028 1184 - -
Cpe18g00031 1184 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 799 1126 IPR027512 GO:0005852
Cpe18g00031 1184 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Cpe18g00031 1184 Coils Coil 816 862 - -
Cpe18g00031 1184 Coils Coil 93 120 - -
Cpe18g00031 1184 Coils Coil 1012 1071 - -
Cpe18g00031 1184 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 898 IPR027512 GO:0005852
Cpe18g00031 1184 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 799 1126 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe18g00031 Cpe-Chr18:552463 Cpe04g00235 Cpe-Chr4:2879879 6.79E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00031 K03254 - csv:101209344 1391.33