Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00055 ATGGGTTGTGTTCTCATGATTATTATCTTCATGTCCATACCTTTTTCAACGCAGAACTCCCACATTTTGATTGCTAACTCACCATTGAATGCAGCAGAGAGCTTCGATGTTGAAGAGTTAGAGAGGGTTTCGGGGGAAGATGAGAGTGGAGGAAATGAGCCTTTCATTCTGGAGAGATTCAGAGCTCTACTTGGACTCAAGAGCTTACAATCGGATGTTTCGTTTTCGCCGTCGCCGTCGCCGTCTCCATCACCGGCAGCCATTGCTCCTTCCCCTGTTCATGTGGCAACTCATCGAGTGCACATTCATGAGCATTCCCACCCTCATCAGCTTCGCTTGCACAAGAGACGACCAGTATACAAACCTAAAAGAGAGGAAGAAGATGCAAGAGAAGGAAGAGTCAGAAAAATTCTTGTTGCAGTTCTTGTGTCTGCAGGAGTCACCATTTTGATATGCTCTATTATTGCCTTTTGGGTCTGCAAGAAGTTCAAAACTCAGAGAGAGGAAGCCACGGAGAAGCTTTCTGTTAAGAGTGAAACAGTAGAGAAGTCAGCTAAACCAAATTCACCAAAATCACCAAAATCTGGCCTTGATCCGTTCGATCTCGGTATGCTTGGAATGGATGCTGAAGAAGAACAGACCCAATGTTCTGTAAGTGAAAAGGAGATATCTGTTCATAAAGAGAGGGAAATGGGCCAAGAGATGTTAGATTCAGAATTTGATAATGTAAGTGTTTCTTCAACCAAGGAAATGATGTATGTTCATGAGGAAGATGATAGTAAATCAATACAATGCGTATCTGCTAAAGCTGATTCCTCATCTGGGGATAGAATTACTCCTGTTAAATCTTGTTCTTCTGATGATGAGGAATCATTCCATTCTTGTGGTGATTCCAATTTGTCGAATGCTCGCCTTTCAAATGCTTCAGAATCTTCTTCTGCTAATGTGATAACAAAATCTACTTGTTCAGTGCCAATTATGAACTTACCAAGTAAATTGGAAACAACACAATGTGATGATTCTAACAAACCATCAACTTCTGACCAGTCGCATATTACCCTTTCTCCTTGCAATCCAGAAAGCAAAATGCAGATGGTTTCCCTCTCTGTAGGTGGCCAAAAGAATGTCCCATCTCTATCTCCGCCTCCGCCGCCACCACCGCCGCCGCCGCCTATCACGGATCGCAGCTCTTTTTCCCTCTCTTCACCCTTTTCAACTGGATCTACTTCCTCTTCTGCATTGTTAAGATCATCATCTCCAGCAATGTCAGATTCTTCTTCGTTATCTCAAATACCATGGAATGATCTGACATCACCTAATCCTGCTGCTAAACCTTCACTACCATCATCTTCTATCCCTCCACCCCCTTCTCCACCACCAAGTTTGAAAGCAAAGGCTTACTCTTTCAAAACTCCACCACCTCTTCCTTCCAAGCTCCCTCAATTCATGGCATTTGGAAAAGAGGGAAATTCGCGGCCAAAACTTAAGCCTCTCCACTGGGACAAAGTAAGAGCTGCACCAGATCGATCAATGGTTTGGGACAAGCTAAGATGGAGTTCATTTGAGCTAGACGAAGAAATGATTGAGTCACTATTTGGCTACAACCAACATGATTCAATGAAGAATGGTGATGCTAGCAACAAAAGCCCTTCTCCAACCAAGCATATACTAGAGGCAAAGAGACTTCAGAACCTAACCATTCTCTTAAAAGCCCTGAATCTCTCTACAGAACAAGTTTGTGAAGCCATAGAACAAGGGACGGGGATGCGTTTGAGACAACTTGAAGCACTGGTGAAGATGGTACCAACACAGGAAGAAGAGGCCAAATTGTTAAGCTATGAAGGAAACATCGGTGAATTGGGGTTTACAGAAAATTTTGTGATATCAATTCTGAAAATACCATTCGCCTTCCAACGAGTAGAAGCCATGCTTTACAGAGAAACTTTTGAAGATGAAGTGAATCATCTCCGGAATTCGTTTTCCATACTAGAGGAAGCCTGTAAGGAGCTAAAATCGAGCAGGCTCTTCCTGAAACTACTGGAAGCGGTGCTCAAAACAGGGAACCGAATGAACGTCGGAACAAGCAGAGGAGGCGCAAGAGCATTCAAACTAGACGCACTCCTAAAACTATCCGACGTCAAAGGAACCGACGGAAAAACCTCCCTACTCCACTTCGTAGTGCAAGAAATGATCCGATCAGAAGGAATCAGAGTGTCCGGTAGCATAATGGGGAAAATCAGCCAAAAAAACAAATCGAGAACAATAGAAGAAAGAGAGAACGATTACCGAAGAATGGGACTAGATCTGGTATCCGGCCTGAGCACAGAACTGCACAACGTGAAGCGAGCGGCAACGATCGATCTGAAAGTTGTTGCGAGCTTGAGGGGGAATCTGAACGACGGAATGGCGAAACTGCAAAAACTGGTGGGGAAGGAGTTGAGCGTGGATGAAAGGAGCGGGAATTTCGTAGGCGCCATGAAAGGATTCATGAGCTACGTGAAGAAGACGATGGAGGAGGTGAGGAAGGACGAAGAAGGGGTGATGTCGAGCGTGAGGGAAATCACAGAGTACTTCCATGGAAATGTGAGCAAAGAGGAGACGAATCCGCTGAGGATATTTGTGATTGTGAGAGATTTTCTTGGAATGTTGGACAGTGTTTGTAAGAGCTTCAAGATTGGAAGTTCATAG 2688 44.2 MGCVLMIIIFMSIPFSTQNSHILIANSPLNAAESFDVEELERVSGEDESGGNEPFILERFRALLGLKSLQSDVSFSPSPSPSPSPAAIAPSPVHVATHRVHIHEHSHPHQLRLHKRRPVYKPKREEEDAREGRVRKILVAVLVSAGVTILICSIIAFWVCKKFKTQREEATEKLSVKSETVEKSAKPNSPKSPKSGLDPFDLGMLGMDAEEEQTQCSVSEKEISVHKEREMGQEMLDSEFDNVSVSSTKEMMYVHEEDDSKSIQCVSAKADSSSGDRITPVKSCSSDDEESFHSCGDSNLSNARLSNASESSSANVITKSTCSVPIMNLPSKLETTQCDDSNKPSTSDQSHITLSPCNPESKMQMVSLSVGGQKNVPSLSPPPPPPPPPPPITDRSSFSLSSPFSTGSTSSSALLRSSSPAMSDSSSLSQIPWNDLTSPNPAAKPSLPSSSIPPPPSPPPSLKAKAYSFKTPPPLPSKLPQFMAFGKEGNSRPKLKPLHWDKVRAAPDRSMVWDKLRWSSFELDEEMIESLFGYNQHDSMKNGDASNKSPSPTKHILEAKRLQNLTILLKALNLSTEQVCEAIEQGTGMRLRQLEALVKMVPTQEEEAKLLSYEGNIGELGFTENFVISILKIPFAFQRVEAMLYRETFEDEVNHLRNSFSILEEACKELKSSRLFLKLLEAVLKTGNRMNVGTSRGGARAFKLDALLKLSDVKGTDGKTSLLHFVVQEMIRSEGIRVSGSIMGKISQKNKSRTIEERENDYRRMGLDLVSGLSTELHNVKRAATIDLKVVASLRGNLNDGMAKLQKLVGKELSVDERSGNFVGAMKGFMSYVKKTMEEVRKDEEGVMSSVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDSVCKSFKIGSS 895
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1095180 1100466 + Cp4.1LG18g00540.1 Cpe18g00055 484516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00055 895 MobiDBLite consensus disorder prediction 446 462 - -
Cpe18g00055 895 Gene3D Formin, FH2 domain 482 891 IPR042201 -
Cpe18g00055 895 SMART it6_source 485 895 IPR015425 -
Cpe18g00055 895 MobiDBLite consensus disorder prediction 335 376 - -
Cpe18g00055 895 MobiDBLite consensus disorder prediction 270 296 - -
Cpe18g00055 895 MobiDBLite consensus disorder prediction 335 470 - -
Cpe18g00055 895 MobiDBLite consensus disorder prediction 103 119 - -
Cpe18g00055 895 MobiDBLite consensus disorder prediction 395 445 - -
Cpe18g00055 895 Coils Coil 646 666 - -
Cpe18g00055 895 PANTHER FORMIN-RELATED 39 389 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cpe18g00055 895 PANTHER FORMIN-RELATED 378 891 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cpe18g00055 895 Pfam Formin Homology 2 Domain 487 883 IPR015425 -
Cpe18g00055 895 MobiDBLite consensus disorder prediction 103 127 - -
Cpe18g00055 895 ProSiteProfiles Formin homology-2 (FH2) domain profile. 485 895 IPR015425 -
Cpe18g00055 895 SUPERFAMILY Formin homology 2 domain (FH2 domain) 498 888 - -
Cpe18g00055 895 MobiDBLite consensus disorder prediction 377 394 - -
Cpe18g00055 895 MobiDBLite consensus disorder prediction 169 200 - -
Cpe18g00055 895 PANTHER FORMIN-LIKE PROTEIN 378 891 - -
Cpe18g00055 895 PANTHER FORMIN-LIKE PROTEIN 39 389 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00268 Cpe-Chr1:1527777 Cpe18g00055 Cpe-Chr18:1095180 1.65E-103 dispersed
Cpe11g00749 Cpe-Chr11:5960845 Cpe18g00055 Cpe-Chr18:1095180 1.50E-70 dispersed
Cpe15g00159 Cpe-Chr15:1315160 Cpe18g00055 Cpe-Chr18:1095180 1.00E-114 dispersed
Cpe16g00458 Cpe-Chr16:5795573 Cpe18g00055 Cpe-Chr18:1095180 7.32E-93 dispersed
Cpe18g00055 Cpe-Chr18:1095180 Cpe04g00158 Cpe-Chr4:1521779 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00055 - - bhj:120070661 1357.43