Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00071 ATGTGGAGTGGGGCTGATATGGGAGTAGCTAGAGAAGCTGAGGGTGAGTTGCCTCAAGACTGTGAGATGGGAGAAGGCTACAGACATGTATCATCACAATTGGTTCACTCACTCTTCCAAAAACGCGTTCGAGAATCGGAATCCTCTCCTCACCGACGCCGCGTTCTCCGTTTCGATTCCTCGCCGGAATCCTCGTCCAGAAGGTCCCTAATCGCCGCCGGCGACTCCAATTCCAATGCGTCTTCGATCCCATATTGTTCCTCTCGTGAATCTCACTTCGATGGCCTCGTTAACTACTTGTATTTCCATTTCTGCGTCTTCGATCGAAACCCATTTCTCTCTGTTCCGTTTCTTATTCTCATTCTTCTCCTCCACTTCTACATCCTCATCAAAACCGCTCAGGATCACTTCTCCATTGTCACTTCCAAGCTCGCTTTTCACCTCAATTTGTCTCCGAGTATGGCTGCTGTGACGCTCTTGGCTTTGGGAAATGGCGCTCCTGATGTGTTTGCATCTGTTGCGGCGGTTCGTGGTGGGCATTATCGAACTGGATTCGGTGCAATTCTCTCTGCCGGCACGTTTGTTTCGGCTTTTGTGGTTGGATTTGTGGCCATTTATGCTGCTCCGTTTTCGGTGAATCCGGCACAGTTTGTGAGGGATGTGTTGTTTTATTTGACCGCAGCGTTGTTCTTGTTCTATGTGTATCTTAGTGCAGAGATTTTCTTGTGGCAAGCTGTTGGGTTTGTTGGATTCTATCTGTTCTTTGTTGGGCTGGTGTTTTGGATGGATTTGGGGAATGGGAAGGCTAAGAGTGGGGCTGATATGGGAGTGGCTAGAGAAGCTGAGGGTGAGTTGCATCAAGACTGTGAGATGGGAGAAGGCTACAGACATGTAGATGAAGGAAAAAACAATTCTGGCTTATGGGAAGCTCTTCGAATGATCCCGAAAGCATGGGAGGCTCCGGTCGTGTTTCTCCTGAAGCTCACCATTCCCCAACCCGCACCTTCCGAATGGAGCAGATTCTTTACCTCAGCCAATATTTCCCTGTGTCCCATTGCTCTTCTCTATGCCTGTAACTCATTCATGTCTTTTAACCATCCCATTGCTTTCCTCTTACCGAATACGCATTTACCTCTTTGGTTCGTAGTACTCTTAGCAAGCTCCTCTCTTGCAATTCTGCACTTCGTCACCGAAACCGAGCCCCCGAAAACTGAGAAAGTCCCTGTTGTGCTTGCAGCATTTGTTATGAGTGTATTTTGGATTTCGACCACCGCAGGTGAACTTCTGAACTGTCTTGCAGCTCTTGGAGTGCTTCTCAAACTCCCAGCAGCTCTACTTGGGCTTACTGTGCTTGCATGGGGAAACTCAGTTGGGGATCTTGTGGCTGATGTTGCTCTTGCAAAAGCAGGCCAGCCCTTGCTGGCTATGGCTGGATGCTTTGCAGGACCGATGTTTAACATGCTTGTCGGGCTCGGAACGGCATTGGTTATACAAACAGCTAACAATTATCCAGAGGCCTATCAGCTTCAATTCCATATCGGAATCGTGATTGCGTTCGTGTTCCTACTTTTCAGCCTGATGGGTTCCTTGCTTGTAGTTATTTGGTGCAGATTTCGGGTGCCTCGGTTTTGGGGATTCTGCCTTGTTGTGCTCTACATTGTTTTCATGGCTACCAGTTTACTGATGGCTGAGTATTCTCCATGA 1704 48.3 MWSGADMGVAREAEGELPQDCEMGEGYRHVSSQLVHSLFQKRVRESESSPHRRRVLRFDSSPESSSRRSLIAAGDSNSNASSIPYCSSRESHFDGLVNYLYFHFCVFDRNPFLSVPFLILILLLHFYILIKTAQDHFSIVTSKLAFHLNLSPSMAAVTLLALGNGAPDVFASVAAVRGGHYRTGFGAILSAGTFVSAFVVGFVAIYAAPFSVNPAQFVRDVLFYLTAALFLFYVYLSAEIFLWQAVGFVGFYLFFVGLVFWMDLGNGKAKSGADMGVAREAEGELHQDCEMGEGYRHVDEGKNNSGLWEALRMIPKAWEAPVVFLLKLTIPQPAPSEWSRFFTSANISLCPIALLYACNSFMSFNHPIAFLLPNTHLPLWFVVLLASSSLAILHFVTETEPPKTEKVPVVLAAFVMSVFWISTTAGELLNCLAALGVLLKLPAALLGLTVLAWGNSVGDLVADVALAKAGQPLLAMAGCFAGPMFNMLVGLGTALVIQTANNYPEAYQLQFHIGIVIAFVFLLFSLMGSLLVVIWCRFRVPRFWGFCLVVLYIVFMATSLLMAEYSP 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1741193 1752926 - Cp4.1LG18g00680.1 Cpe18g00071 484532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00071 567 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 311 563 - -
Cpe18g00071 567 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 311 563 - -
Cpe18g00071 567 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 90 269 - -
Cpe18g00071 567 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 90 269 - -
Cpe18g00071 567 Gene3D - 342 560 IPR044880 -
Cpe18g00071 567 Gene3D - 150 276 IPR044880 -
Cpe18g00071 567 Pfam Sodium/calcium exchanger protein 120 260 IPR004837 GO:0016021|GO:0055085
Cpe18g00071 567 Pfam Sodium/calcium exchanger protein 411 560 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01015 Cpe-Chr4:9056805 Cpe18g00071 Cpe-Chr18:1741193 9.23E-14 dispersed
Cpe08g00684 Cpe-Chr8:5219935 Cpe18g00071 Cpe-Chr18:1741193 8.98E-60 dispersed
Cpe18g00071 Cpe-Chr18:1741193 Cpe03g00470 Cpe-Chr3:2714883 4.18E-52 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00071 K13754 - csv:101209909 839.721