Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00129 ATGATGATGATGTTCAATGAGATGGGATTTTGTGACGATATGGATTTCCTTTCGGCTCCGATTGTGGATGGAGATGTCGTAGCTCGACCAGCTGATCCTGAAGTTGTGGTGGAAGATGATTATTCTGATGAAGAGATCGATGTCGATGAGCTTGAGAGGAGGATGTGGAGGGACAAGATGCGTCTCAAACGTCTTAAAGAGCAAAGTAAGGTTAAGGAAGGGATTGATATCGCGAAGCAGCGACAGTCTCAAGACCAGGCTAGGAGGAAGAAGATGTCGAGGGCTCATGATGGGATCTTGAAGTACATGTTGAAGATTATGGAAGTTTGTAATGCTCAAGGTTTTGTATATGGAATAATTCCAGAGAAGGGAAAGCCAGTAACCGGGGCATCGGATAATCTGCGTGAATGGTGGAAAGACAAGGTTAGATTTGATAGAAACGGACCGGCTGCCATAGCTAAGTACCAGGCAGACAATGCGATTCCCGGACGAAACGATGGGTGCGCTGAGGAGGAACCGAGCTTTGATGTTCAAGATCGTAAACCTGATAACCATAGCTGCTCATTCAACTTGGGAATGGAGAGAACGAGAGAACGGGTGCCCCTTCGACAACCACCGTATGCAATCAAAGGAGAGGTTTCTACAAACTTAGATTTTATGCGAAAGAGGAAACCGACCAGCGATCTGAACATGATGATGGATCAGAAGATCTATACTTGTGAGTTCCTCCAGTGTCCTTATAGCGAGCTTCGTCTCGGGTTCAACGACAGGACGTCTAGAGACAACCATCAGTTGTCCTGTCCATATAGAACTTCTTCAGAATTCAATGGCTCAAGTTTTCATGTCAATGAGGTTAAACCAGTTATCTTCCCTCAGTCATTCGCCCCGCCCAAGTCAGCTCCACCCCCAGTTAGCTCGGTTCCATCGTCCTTCGACCTGTCCACTTTAGGCGTTCCAGAAGACGACCAAAAGATGATCAGGGAGCTCATGTCGATCTACGACACCAACATCCAAGGAAACCAAAGCAACGTAAACACTGGTAACAGCGCTATCACGGAGAACCAAAATCTTCCTCAGTTAAAGATCCAACCTCAACAAGACGAATACTTTCGCAATCAAGGTATAATGATGGACGGAAACTTCTTCGAGGGATCGAACGTTTCTAGCAGCCAATTCAACCAGTTTAAGCCAATGAATTCACCTTTCGAAAACAACCACCACGAGCACAACAACAACAACAACAACAACTTCCACATGATGTTTGGCTCTCCATTCGATTTGTCGACCTTCGACTTCAAAGAAGAACTACCCGGTGCAGCAGCCATCGATACACTGTCGAAACAGCAGGATATTCCATTATGGTATCATTGA 1371 45.81 MMMMFNEMGFCDDMDFLSAPIVDGDVVARPADPEVVVEDDYSDEEIDVDELERRMWRDKMRLKRLKEQSKVKEGIDIAKQRQSQDQARRKKMSRAHDGILKYMLKIMEVCNAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGRNDGCAEEEPSFDVQDRKPDNHSCSFNLGMERTRERVPLRQPPYAIKGEVSTNLDFMRKRKPTSDLNMMMDQKIYTCEFLQCPYSELRLGFNDRTSRDNHQLSCPYRTSSEFNGSSFHVNEVKPVIFPQSFAPPKSAPPPVSSVPSSFDLSTLGVPEDDQKMIRELMSIYDTNIQGNQSNVNTGNSAITENQNLPQLKIQPQQDEYFRNQGIMMDGNFFEGSNVSSSQFNQFKPMNSPFENNHHEHNNNNNNNFHMMFGSPFDLSTFDFKEELPGAAAIDTLSKQQDIPLWYH 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2858931 2860790 - Cp4.1LG18g01370.1 Cpe18g00129 484590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00129 456 Gene3D - 81 160 IPR023278 GO:0003700|GO:0005634
Cpe18g00129 456 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 2 170 - -
Cpe18g00129 456 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 168 455 - -
Cpe18g00129 456 Coils Coil 48 68 - -
Cpe18g00129 456 Pfam Ethylene insensitive 3 49 171 IPR006957 GO:0005634
Cpe18g00129 456 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 2 170 IPR006957 GO:0005634
Cpe18g00129 456 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 168 455 IPR006957 GO:0005634
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00955 Cpe18g00129 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02155 Cpe-Chr1:18127395 Cpe18g00129 Cpe-Chr18:2858931 4.05E-103 dispersed
Cpe04g00932 Cpe-Chr4:8443381 Cpe18g00129 Cpe-Chr18:2858931 6.54E-51 dispersed
Cpe13g00722 Cpe-Chr13:6655616 Cpe18g00129 Cpe-Chr18:2858931 5.56E-53 dispersed
Cpe14g00591 Cpe-Chr14:3773072 Cpe18g00129 Cpe-Chr18:2858931 1.30E-34 dispersed
Cpe18g00129 Cpe-Chr18:2858931 Cpe04g00955 Cpe-Chr4:8670547 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50863 PF04873 EIN3 1.70E-55 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00129 K14514 - csv:101206055 465.307