Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00130 ATGTTCGGGATGACAACGGAGGTGGCGACCGTGGCAACAGTGGCGGTGGTAGTCACGATGGCGGGGTGGTTGCTCGGTGGAGTTGAGGGTAGAGAACCAGTGTTGCATAGAGTTGGAGGAGGAAAATACACTTGGACAACTAATGTTAACTTCACTGATTGGTCAATTCACGAGCATTTTTACGTTGGTGATTGGCTCTATTTCGGGTTCGATAAACGTATCTACAACGTGCTACAAGTGAACAAAACGAGCTACGATAGTTGCAACGAGAATGATTTCGTTTTCAACGTAACGAGAGGAGGACGAGACGTGTTTAACCTAACACAAGCAAAGCCATACTACTTTCTAAGCGGAAGAGGGTTTTGCTTTCAAGGAATGAAGGTTGCTATCTTTGTTGAAGACTCGCCTCCCATTTCATCACCCAGAATTTCAAACCATTCTTCATCTATTCAACCATTAAAGCCTCTCTCATCCCTCTCGGTATTGATCACGCTTGCCTTCACTAAAATCGTTCTTCTAAATTAG 525 44.57 MFGMTTEVATVATVAVVVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGFDKRIYNVLQVNKTSYDSCNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRGFCFQGMKVAIFVEDSPPISSPRISNHSSSIQPLKPLSSLSVLITLAFTKIVLLN 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2867570 2868498 + Cp4.1LG18g01270.1 Cpe18g00130 484591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00130 174 PANTHER EARLY NODULIN-LIKE PROTEIN 20 13 149 - -
Cpe18g00130 174 PANTHER BLUE COPPER PROTEIN 13 149 IPR039391 GO:0009055
Cpe18g00130 174 Pfam Plastocyanin-like domain 45 126 IPR003245 GO:0009055
Cpe18g00130 174 ProSiteProfiles Phytocyanin domain profile. 34 134 IPR003245 GO:0009055
Cpe18g00130 174 Gene3D - 35 141 IPR008972 -
Cpe18g00130 174 SUPERFAMILY Cupredoxins 35 132 IPR008972 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00182 Cpe-Chr4:1846310 Cpe18g00130 Cpe-Chr18:2867570 3.90E-31 dispersed
Cpe04g00183 Cpe-Chr4:1852202 Cpe18g00130 Cpe-Chr18:2867570 2.85E-44 dispersed
Cpe18g00130 Cpe-Chr18:2867570 Cpe16g00322 Cpe-Chr16:5070195 9.06E-13 dispersed
Cpe18g00130 Cpe-Chr18:2867570 Cpe05g00270 Cpe-Chr5:1516110 1.95E-10 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00130 - - cmos:111461613 330.872