Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00141 ATGAGGCCTGTCAAACGCGAATCCGCCGCCAGCAGCCGCACTAATCGGAGTAGAGGCGGCGCTGTTGCTGTCGATGCTGCGAGTTTAAGGGGCGTTAAGCGGGAGAGGATGGTAGCTCGGGAGCGAGAGAAGTCCGGCGTGGATAATACGACTGAAGAAGAAGAGGGTCAGCAAGAGTTGTCGAAGCGGCGGGTTCTTCGCTCTCGGTACCTTGCTGTTATTCATGAGATTAGCGAACGAAGAGAAGATTTGTCGAAGGATTTGGATAAGTTTAATGTTATCATCAATGAGGTGGAAAAGTTGCACGAGCAAGTTCAGAAGCCAAGGGAACAAGTTGCAGATGCAGAGGCGTTGCAAGATATTGCAAGCTCCCTCATGACCTCTATTAGGTCTCAGTCGAATGAAGGTGTTACTCCATCAGATTTTGTCAGTTGTCTTCTCAGAGAGTTTGCTGACATTAACGGTAATATAACATCCGAAGAAAACGACCTGGTTTCTGTCAGTTGGAAAGATATTGGACTCAGTGTTTCGTCCATTTTCATGAATGGCCATGGATGCCGCACCATGCTTGGACCTATGAGCAATCAGTTGAAGCAGCGAAAAACTACTAATATTTCCAGGAAACGTTCCCGACCTACTGAAAGTTATAGACCTACAGAGGTCGAAGATAATGTATCTGAAGAAAAAACAGATACAGATAAGAACATGGGTATCATGTTTGGAATTTTGAGGAGGAACAAAACCGTTAAACTTGAACATTTGATATTGAATAGAAAGTCTTTTGCTCAGACAGTAGAGAATTTATTTGCTCTATCCTTTCTAGTTAAGGATGGTCGGGCTGCGATAACTATTGATGAAAATGGTTCTCATTTTGTGTGTGAGTATCTACAAACTAAACGTTTTATGCTTCTGTTCGAAAACATCGTGTTCTTTGTAGTATACTTACATTCCCTGCCAACGTTTTCAGCACCGAAGAACGCCCCTGCCCATAGTGCCATTATGTCACATGAAGTTAATTACAGTCATTTTGTGTTCAGATTCGATTTCAAGGATTGGAAGCCAATGGTGGATATGGTACCAGTTGGAGATGAGCTGATGCCACACAGGAACATACTGAACTCAGCGCAGGTGCCTCAAGCAGAAGCATCGACGGACGATTCTGAAGCAGCAGCATTACCTACTACACCAATTCGAAAGCTGTCGCGAAATCGAGGTTTAGTTATGCAATCTGTTGTTGAAGATTCTCCTGATAATGGCGCTCATTCAGGAGCAACTGCAATCTTGAGGTGTAAGAGAAAGCTTAATCAAGGTATGGTTAACTAG 1323 43.84 MRPVKRESAASSRTNRSRGGAVAVDAASLRGVKRERMVAREREKSGVDNTTEEEEGQQELSKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIASSLMTSIRSQSNEGVTPSDFVSCLLREFADINGNITSEENDLVSVSWKDIGLSVSSIFMNGHGCRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPTEVEDNVSEEKTDTDKNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDENGSHFVCEYLQTKRFMLLFENIVFFVVYLHSLPTFSAPKNAPAHSAIMSHEVNYSHFVFRFDFKDWKPMVDMVPVGDELMPHRNILNSAQVPQAEASTDDSEAAALPTTPIRKLSRNRGLVMQSVVEDSPDNGAHSGATAILRCKRKLNQGMVN 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2976005 2979149 - Cp4.1LG18g01420.1 Cpe18g00141 484602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00141 440 PANTHER UNCHARACTERIZED 40 435 IPR027786 GO:0005634|GO:0006281|GO:0030915
Cpe18g00141 440 MobiDBLite consensus disorder prediction 191 230 - -
Cpe18g00141 440 MobiDBLite consensus disorder prediction 207 230 - -
Cpe18g00141 440 MobiDBLite consensus disorder prediction 29 61 - -
Cpe18g00141 440 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 40 435 - -
Cpe18g00141 440 MobiDBLite consensus disorder prediction 1 61 - -
Cpe18g00141 440 Pfam Nse4 C-terminal 249 365 IPR014854 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00939 Cpe18g00141 CCT
Cpe04g00939 Cpe18g00141 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe18g00141 Cpe-Chr18:2976005 Cpe04g00939 Cpe-Chr4:8487503 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00141 K22825 - csv:101220149 655.595